Contig 012351:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028P20Sequence569000009 (4)ref|XP_006338731.1|71.6PREDICTED: uncharacterized protein LOC102587962 [Solanum tuberosum]123012351 (3)
JMFF032J09Sequence589000009 (4)ref|XP_006338731.1|86.3PREDICTED: uncharacterized protein LOC102587962 [Solanum tuberosum]757012351 (3)ref|XP_004231746.1|159PREDICTED: uncharacterized protein LOC101258711 [Solanum lycopersicum]
JMFF044B07Sequence647000009 (4)ref|XP_006338731.1|115PREDICTED: uncharacterized protein LOC102587962 [Solanum tuberosum]659012351 (3)ref|XP_004231746.1|145PREDICTED: uncharacterized protein LOC101258711 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF044B07+                                                              CAACTGGA
rJMFF032J09+                                 TGGCAAAAGTAGGCTGCAGATGGTGGCTTCAACTGGA
                      ____________________________________________________________
consensus                                    TGGCAAAAGTAGGCTGCAGATGGTGGCTTCAACTGGA
 
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rJMFF044B07+          GATCAGGCTGATGATGAGATGTCTCCTCGAGTGCAAGTCAACCCCAGCCCGGTTCGTGAC
rJMFF032J09+          GATCAGGCTGATGATGAGATGTCTCCTCGAGTGCAAGTCAACCCCAGCCCGGTTCGTGAC
                      ____________________________________________________________
consensus             GATCAGGCTGATGATGAGATGTCTCCTCGAGTGCAAGTCAACCCCAGCCCGGTTCGTGAC
 
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rJMFF044B07+          ATAAATACCAAAAGCGCCTCTTCTAGTGTTTCTTCTTCGTCTTCTTCTTCTTTTTCGTGT
rJMFF032J09+          ATAAATACCAAAAGCGCCTCTTCTAGTGTTTCTTCTTCGTCTTCTTCTTCTTTTTCGTGT
                      ____________________________________________________________
consensus             ATAAATACCAAAAGCGCCTCTTCTAGTGTTTCTTCTTCGTCTTCTTCTTCTTTTTCGTGT
 
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rJMFF044B07+          GTAGGCATCTTCACCCATGCAATCCCAATTAAGTGTGTTGTTACCGGGCTTCTTGGATGC
rJMFF032J09+          GTGGGCATCTTCACCCATGCAATCCCAATTAAGTGTGTTGTTACCGGGCTTCTTGGATGC
                      ____________________________________________________________
consensus             GTGGGCATCTTCACCCATGCAATCCCAATTAAGTGTGTTGTTACCGGGCTTCTTGGATGC
 
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rJMFF044B07+          AGTGCAGTAATGTCGAGTAAGATCTGTGTAGACGATTCTTCAGTAACCGTGTTACAACAT
rJMFF032J09+          AGTGCAGTAATGTCGAGTAAGATCTGTGTAGACGATTCTTCAGTAACCGTGTTACAACAT
                      ____________________________________________________________
consensus             AGTGCAGTAATGTCGAGTAAGATCTGTGTAGACGATTCTTCAGTAACCGTGTTACAACAT
 
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rJMFF044B07+          TCATGGAAAATGGGATGGCAAATAAAGAGATTGAATGATACATCACATCTTAGGCTTCTA
rJMFF032J09+          TCATGGAAAATGGGATGGCAAATAAAGAGATTGAATGATACATCACATCTTAGGCTTCTA
                      ____________________________________________________________
consensus             TCATGGAAAATGGGATGGCAAATAAAGAGATTGAATGATACATCACATCTTAGGCTTCTA
 
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rJMFF044B07+          TAGTAAATTATTACTAGTGGATAAGATTGTTGCCAGAGGAAGTCTTCAGCCAAGAAAAAT
rJMFF032J09+          TAGTAAATTATTACTAGTGGATAAGATTGTTGCCAGAGGAAGTCTTCAGCCAAGAAAAAT
                      ____________________________________________________________
consensus             TAGTAAATTATTACTAGTGGATAAGATTGTTGCCAGAGGAAGTCTTCAGCCAAGAAAAAT
 
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rJMFF028P20+                                   ATCTGAGAACCACTAAAGCAGAGTGATTGATTGAA
rJMFF044B07+          AAACTTGGGGTTGCTTTTGGTTGAGATCTGAGAACCACTAAAGCAGAGTGATTGATTGAA
rJMFF032J09+          AAACTTGGGGTTGCTTTTGGTTGAGATCTGAGAACCACTAAAGCAGAGTGATTGATTGAA
                      ____________________________________________________________
consensus             AAACTTGGGGTTGCTTTTGGTTGAGATCTGAGAACCACTAAAGCAGAGTGATTGATTGAA
 
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rJMFF028P20+          TGTATATTCCACGGCTCCTCCACATTTCAAGTTTGGAAAATACCTTTTGGTTATTGTAAG
rJMFF044B07+          TGTATATTCCACGGCTCCTCCACATTTCAAGTTTGGAAAATACCTTTTGGTTATTGTAAG
rJMFF032J09+          TGTATATTCCACGGCTCCTCCACATTTCAAGTTTGGAAAATACCTTTTGGTTATTGTAAG
                      ____________________________________________________________
consensus             TGTATATTCCACGGCTCCTCCACATTTCAAGTTTGGAAAATACCTTTTGGTTATTGTAAG
 
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rJMFF028P20+          CCTTGGCTTGGCTATATTTATTTCACAC                                
rJMFF044B07+          CCTTGGCTTGGCTATATTTATTTCACACTGAATTGGGAATGGTGGTAGAGTTGTAATCAT
rJMFF032J09+          CCTTGGCTTGGCTATATTTATTTCACACTGAATTGGGAATGGTGGTAGAGTTGTAATCAT
                      ____________________________________________________________
consensus             CCTTGGCTTGGCTATATTTATTTCACACTGAATTGGGAATGGTGGTAGAGTTGTAATCAT
 
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rJMFF044B07+          GGTTTTGGTGATTGTCTTGTTTTGTAACTTTAACAATTGTTGTTAAATGTGATACGGAGT
rJMFF032J09+          GGTTTTGGTGATTGTCTTGTTTTGTAACTTTAACAATTGTTGTTAAATGTGATACGGAGT
                      ____________________________________________________________
consensus             GGTTTTGGTGATTGTCTTGTTTTGTAACTTTAACAATTGTTGTTAAATGTGATACGGAGT
 
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rJMFF044B07+          GCTACATCA                                                   
rJMFF032J09+          GCTACATCATATACTCAGGTCTACATCTACTGCTGGAAGAAGAAGAAGTGGGGTATGACT
                      ____________________________________________________________
consensus             GCTACATCATATACTCAGGTCTACATCTACTGCTGGAAGAAGAAGAAGTGGGGTATGACT
 
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rJMFF032J09+          TGTCATCAAATTACATTGAACTCCGACCTATTTGAGTTGATAAATAAAGAGTATTATATT
                      ____________________________________________________________
consensus             TGTCATCAAATTACATTGAACTCCGACCTATTTGAGTTGATAAATAAAGAGTATTATATT