Contig 012335:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029O24Sequence596012335 (2)ref|XP_009764086.1|2e-71PREDICTED: F-box protein PP2-B10-like [Nicotiana sylvestris]662012335 (2)gb|EYU34847.1|5e-44hypothetical protein MIMGU_mgv1a010720mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF029O24-                                     GTATCGTACATTCATACATTAAGAACGGAAATTC
                      ____________________________________________________________
consensus                                       GTATCGTACATTCATACATTAAGAACGGAAATTC
 
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JMFF029O24-           ACATTTCACAGGCAGAACTAAACTGAGATTCAGCCATGGCGGTGGACAGCATTATTGGTG
                      ____________________________________________________________
consensus             ACATTTCACAGGCAGAACTAAACTGAGATTCAGCCATGGCGGTGGACAGCATTATTGGTG
 
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JMFF029O24-           CGGATATCTACAGTCTGCCGGAGGATTGCATAGCCGCCGCGCTGTCGCTGACGACCCCTA
                      ____________________________________________________________
consensus             CGGATATCTACAGTCTGCCGGAGGATTGCATAGCCGCCGCGCTGTCGCTGACGACCCCTA
 
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JMFF029O24-           GGGATGCCTGCCGTCTTATGCTGGTAGCATCAAACTTCCGTTCCGCGGCACAATTCGACG
                      ____________________________________________________________
consensus             GGGATGCCTGCCGTCTTATGCTGGTAGCATCAAACTTCCGTTCCGCGGCACAATTCGACG
 
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JMFF029O24-           CCGTCTGGGAGCGGTTTTTGCCGCTTGATCACCGCGATCTTGTTTCCCGTGCCGTCAACA
                      ____________________________________________________________
consensus             CCGTCTGGGAGCGGTTTTTGCCGCTTGATCACCGCGATCTTGTTTCCCGTGCCGTCAACA
 
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JMFF029O24-           GCGCCGATTTGCTCGCTCTCGCCTCCAAGAAGGACCTCTACTTCTACCTCTGCGACCATC
                      ____________________________________________________________
consensus             GCGCCGATTTGCTCGCTCTCGCCTCCAAGAAGGACCTCTACTTCTACCTCTGCGACCATC
 
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JMFF029O24-           ACATCATTATCGATGACGGCACCAAGAGTTTTTCACTGGAGAAAGGGAGTGGGAAGAAAT
                      ____________________________________________________________
consensus             ACATCATTATCGATGACGGCACCAAGAGTTTTTCACTGGAGAAAGGGAGTGGGAAGAAAT
 
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JMFF029O24-           GCTACATGTTAGGTGCAAAGTCACTGCAAATTGTTTGGGGCAACGATCCCCGATATTGGA
rJMFF029O24+                                                                    GA
                      ____________________________________________________________
consensus             GCTACATGTTAGGTGCAAAGTCACTGCAAATTGTTTGGGGCAACGATCCCCGATATTGGA
 
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JMFF029O24-           AATGGATTCATGCTTCGGAATCAAGCTTCTCTGATGCTGTGGAGCTACTTGATGTATGTT
rJMFF029O24+          AATGGATTCATGCTTCGGAATCAAGCTTCTCTGATGCTGTGGAGCTACTTGATGTATGTT
                      ____________________________________________________________
consensus             AATGGATTCATGCTTCGGAATCAAGCTTCTCTGATGCTGTGGAGCTACTTGATGTATGTT
 
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JMFF029O24-           GGTTCGAGATTCACGGCAAGATCAATACAAAGATGCTGTCTCCAGACGCCAACTACGCAG
rJMFF029O24+          GGTTCGAGATTCACGGCAAGATCAATACAAAGATGCTGTCTCCAGACGCCAACTACGCAG
                      ____________________________________________________________
consensus             GGTTCGAGATTCACGGCAAGATCAATACAAAGATGCTGTCTCCAGACGCCAACTACGCAG
 
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JMFF029O24-           CTTACCTTGTGTTCACAGCGAG                                      
rJMFF029O24+          CTTACCTTGTGTTCACAGCGAGACCAGGCATCACCGGTTTTGAATCCCAACCGGTCGAGG
                      ____________________________________________________________
consensus             CTTACCTTGTGTTCACAGCGAGACCAGGCATCACCGGTTTTGAATCCCAACCGGTCGAGG
 
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rJMFF029O24+          TTTCAGTTAGGATCGGTGAGCGGGAGGCTACCACCCGGACTGTTTATCTGGATCCCTATC
                      ____________________________________________________________
consensus             TTTCAGTTAGGATCGGTGAGCGGGAGGCTACCACCCGGACTGTTTATCTGGATCCCTATC
 
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rJMFF029O24+          TGGATCCCAAAGGAAGGATGTTACCCCGGAGGAGGGCATTGCGAATAGGGCCATTCCTTA
                      ____________________________________________________________
consensus             TGGATCCCAAAGGAAGGATGTTACCCCGGAGGAGGGCATTGCGAATAGGGCCATTCCTTA
 
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rJMFF029O24+          ACCGGACACTACAGAACGCGAATGCAGCAGCTCCAGAGAACAATGGTGAATGTCCAAAGA
                      ____________________________________________________________
consensus             ACCGGACACTACAGAACGCGAATGCAGCAGCTCCAGAGAACAATGGTGAATGTCCAAAGA
 
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rJMFF029O24+          AGAGAGATGATGCATGGATGGAAGTTGAACTAGGAGAAATTTTCGTCAGAGATGGTGAAG
                      ____________________________________________________________
consensus             AGAGAGATGATGCATGGATGGAAGTTGAACTAGGAGAAATTTTCGTCAGAGATGGTGAAG
 
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rJMFF029O24+          AAGAAGATGAGTGCATAGACATTAGTTTGAAGGAAGTGAAGGGAGGGCATTGGAAGAGTG
                      ____________________________________________________________
consensus             AAGAAGATGAGTGCATAGACATTAGTTTGAAGGAAGTGAAGGGAGGGCATTGGAAGAGTG
 
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rJMFF029O24+          GTATCATTGTGTTAGGGATTGAGATCAGACCAAAATGGTCCAAATGATCACTCACTAGCA
                      ____________________________________________________________
consensus             GTATCATTGTGTTAGGGATTGAGATCAGACCAAAATGGTCCAAATGATCACTCACTAGCA
 
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rJMFF029O24+          ACTCAGATCAGAATTTGTTTGTATATGAAGAGAATTAATATTTGATGCACTGGTTGCATT
                      ____________________________________________________________
consensus             ACTCAGATCAGAATTTGTTTGTATATGAAGAGAATTAATATTTGATGCACTGGTTGCATT
 
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rJMFF029O24+          GTATCAAATCTTAATTCTTTCTCGAACATAGAAAAATCCATTTTGAAAAACTTGTCCAAT
                      ____________________________________________________________
consensus             GTATCAAATCTTAATTCTTTCTCGAACATAGAAAAATCCATTTTGAAAAACTTGTCCAAT