Contig 012326:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028F04Sequence643012326 (3)emb|CDP07519.1|2e-84unnamed protein product [Coffea canephora]
JMSF003N14Sequence352006703 (2)ref|XP_009801650.1|2e-35PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [N771012326 (3)emb|CDP07519.1|3e-122unnamed protein product [Coffea canephora]
JMSF045J04Sequence659006703 (2)ref|XP_006367624.1|1e-81PREDICTED: tRNA wybutosine-synthesizing protein 1 homolog [Solanum tuberosum]663012326 (3)emb|CDP07519.1|1e-95unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+                                   ACAATTCCCTGAAAGGATAATGATGCTNAAACCCA
                      ____________________________________________________________
consensus                                      ACAATTCCCTGAAAGGATAATGATGCTNAAACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          ATCACACAGTTATATGTTAGTGTTGATGCTGCTACAAAGGAGAGTTTGGAAAGCAATTGA
                      ____________________________________________________________
consensus             ATCACACAGTTATATGTTAGTGTTGATGCTGCTACAAAGGAGAGTTTGGAAAGCAATTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          TAGACCACTATTTGGAGACTTCTGGGAGCGATTTATGGACTCCTTGAAAGCTCTTAAGGA
                      ____________________________________________________________
consensus             TAGACCACTATTTGGAGACTTCTGGGAGCGATTTATGGACTCCTTGAAAGCTCTTAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          GAAGCAACAACGAACTGTCTACCGCTTGACACTAGTTAAAGGGTGGAATACAGAAGATGT
rJMSF045J04+                                              TAAAGGGTGGAATACAGAAGATGT
                      ____________________________________________________________
consensus             GAAGCAACAACGAACTGTCTACCGCTTGACACTAGTTAAAGGGTGGAATACAGAAGATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          AGACGCCTATTCTAGCCTATTCAGCATTGGAAACCCCGATTTCATTGAAATCAAGGGTGT
rJMSF045J04+          AGACGCCTATTCTAGCCTATTCAGCATTGGAAACCCCGATTTCATTGAAATCAAGGGTGT
rJMFF028F04+                           TATTCAGCATTGGAAACCCCGATTTCATTGAAATCAAGGGTGT
                      ____________________________________________________________
consensus             AGACGCCTATTCTAGCCTATTCAGCATTGGAAACCCCGATTTCATTGAAATCAAGGGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          TACTTATTGTGGATCGTCTGCTACATCAAAGTTAACAATGGAGAATGTGCCATGGCATTC
rJMSF045J04+          TACTTATTGTGGATCGTCTGCTACATCAAAGTTAACAATGGAGAATGTGCCATGGCATTC
rJMFF028F04+          TACTTATTGTGGATCGTCTGCTACATCAAAGTTAACAATGGAGAATGTGCCATGGCATTC
                      ____________________________________________________________
consensus             TACTTATTGTGGATCGTCTGCTACATCAAAGTTAACAATGGAGAATGTGCCATGGCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          CGATGTGAAGGAGTTCTCCGAAGCCTTGGCTAAAAAAAGCAACGGGGAGTATGAAGTTGC
rJMSF045J04+          CGATGTGAAGGAGTTCTCCGAAGCCTTGGCTAAAAAAAGCAACGGGGAGTATGAAGTTGC
rJMFF028F04+          CGATGTGAAGGAGTTCTCCGAAGCCTTGGCTAAAAAAAGCAACGGGGAGTATGAAGTTGC
                      ____________________________________________________________
consensus             CGATGTGAAGGAGTTCTCCGAAGCCTTGGCTAAAAAAAGCAACGGGGAGTATGAAGTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          ATGTGAACACGTGCATTCTTGTTGTGTCCTTCTAGCCAAAGTCGAGAAGTTTAAGATCGA
rJMSF045J04+          ATGTGAACACGTGCATTCTTGTTGTGTCCTTCTAGCCAAAGTCGAGAAGTTTAAGATCGA
rJMFF028F04+          ATGTGAACACGTGCATTCTTGTTGTGTCCTTCTAGCCAAAGTCGAGAAGTTTAAGATCGA
                      ____________________________________________________________
consensus             ATGTGAACACGTGCATTCTTGTTGTGTCCTTCTAGCCAAAGTCGAGAAGTTTAAGATCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          TGGCCAGTGGTTCACGTGGATAGACTACGAGAAGTTTCACGATCTGGTCGCTTCTGGAAA
rJMSF045J04+          TGGCCAGTGGTTCACGTGGATAGACTACGAGAAGTTTCACGATCTGGTCGCTTCTGGAAA
rJMFF028F04+          TGGCCAGTGGTTCACGTGGATAGACTACGAGAAGTTTCACGATCTGGTCGCTTCTGGAAA
                      ____________________________________________________________
consensus             TGGCCAGTGGTTCACGTGGATAGACTACGAGAAGTTTCACGATCTGGTCGCTTCTGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          ACCCTTTAGAAGCGGAGATTACATGGCTCCCACACCATCGTGGGCGGTGTATGGAGCAGA
rJMSF045J04+          ACCCTTTAGAAGCGGAGATTACATGGCTCCCACACCATCGTGGGCGGTGTATGGAGCAGA
rJMFF028F04+          ACCCTTTAGAAGCGGAGATTACATGGCTCCCACACCATCGTGGGCGGTGTATGGAGCAGA
                      ____________________________________________________________
consensus             ACCCTTTAGAAGCGGAGATTACATGGCTCCCACACCATCGTGGGCGGTGTATGGAGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          GGAAGGCGGGTTTGATCCAGAGCAATCGCGCTACAAAAAGGAGAGGCATCACAGATCAAC
rJMSF045J04+          GGAAGGCGGGTTTGATCCAGAGCAATCGCGCTACAAAAAGGAGAGGCATCACAGATCAAC
rJMFF028F04+          GGAAGGCGGGTTTGATCCAGAGCAATCGCGCTACAAAAAGGAGAGGCATCACAGATCAAC
                      ____________________________________________________________
consensus             GGAAGGCGGGTTTGATCCAGAGCAATCGCGCTACAAAAAGGAGAGGCATCACAGATCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          TCGCTGAGAATGTTACCATGGCTTCTGAAAGCTTTCTTGTTTTACTGCCATGGATGATGG
rJMSF045J04+          TCGCTGAGAATGTTACCATGGCTTCTGAAAGCTTTCTTGTTTTACTGCCATGGATGATGG
rJMFF028F04+          TCGCTGAGAATGTTACCATGGCTTCTGAAAGCTTTCTTGTTTTACTGCCATGGATGATGG
                      ____________________________________________________________
consensus             TCGCTGAGAATGTTACCATGGCTTCTGAAAGCTTTCTTGTTTTACTGCCATGGATGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          CCTACAATTTTGATCATTCTATTATCTGTTTTATCTGCCATTGCTGAAGAAGTTTATGTT
rJMSF045J04+          CCTACAATTTTGATCATTCTATTATCTGTTTTATCTGCCATTGCTGAAGAAGTTTATGTT
rJMFF028F04+          CCTACAATTTTGATCATTCTATTATCTGTTTTATCTGCCATTGCTGAAGAAGTTTATGTT
                      ____________________________________________________________
consensus             CCTACAATTTTGATCATTCTATTATCTGTTTTATCTGCCATTGCTGAAGAAGTTTATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF003N14+          ATAGAACTTATAGTAT                                            
rJMSF045J04+          ATAGAACTTATAGTATTATATTGATCATCATACATCATCCTCTTTTGGATGATGAGACAT
rJMFF028F04+          ATAGAACTTATAGTATTATATTGATCATCATACATCATCCTCTTTTGGATGATGAGACAT
                      ____________________________________________________________
consensus             ATAGAACTTATAGTATTATATTGATCATCATACATCATCCTCTTTTGGATGATGAGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF045J04+          TTAAATAGCTTCTGAAACATAGTTTGATCT                              
rJMFF028F04+          TTAAATAGCTTCTGAAACATAGTTTGATCTTACAGGTTGATATAATTCTCGTTAAGAGAA
                      ____________________________________________________________
consensus             TTAAATAGCTTCTGAAACATAGTTTGATCTTACAGGTTGATATAATTCTCGTTAAGAGAA