Contig 012318:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016L06Sequence576011519 (5)gb|KDO79974.1|2e-88hypothetical protein CISIN_1g008569mg [Citrus sinensis]763012318 (4)ref|XP_009594923.1|3e-59PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0
JMFF026C11Sequence539011519 (5)gb|KDO79974.1|1e-81hypothetical protein CISIN_1g008569mg [Citrus sinensis]646012318 (4)ref|XP_009594923.1|6e-34PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0
JMSF040O24Sequence681011519 (5)gb|KDO79974.1|2e-109hypothetical protein CISIN_1g008569mg [Citrus sinensis]805012318 (4)ref|XP_009594923.1|1e-59PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0
JMSF052L16Sequence668011519 (5)gb|KDO79974.1|2e-109hypothetical protein CISIN_1g008569mg [Citrus sinensis]908012318 (4)ref|XP_009594923.1|1e-61PREDICTED: clathrin interactor EPSIN 1-like [Nicotiana tomentosiformis] ref|XP_0

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052L16+ CGCTCGGAAGTTGATTTATTTTGCTGATGCAGATTTTGTATCTGCTACCCCCAGTCTAA
                      ____________________________________________________________
consensus CGCTCGGAAGTTGATTTATTTTGCTGATGCAGATTTTGTATCTGCTACCCCCAGTCTAA
 
. : . : . : . : . : . :
rJMSF040O24+ GGGGGAAGCTCTCAGTCTCAGACGAGTGGTTGATCTGTTCGCCCAACCTGAAGTAG
rJMSF052L16+ AATGGGGGGAAGCTCTCAGTCTCAGACGAGT-GTTGATCTGTTCGCCCAACCTGAAGTAG
                      ____________________________________________________________
consensus AATGGGGGGAAGCTCTCAGTCTCAGACGAGTGGTTGATCTGTTCGCCCAACCTGAAGTAG
 
. : . : . : . : . : . :
rJMSF040O24+ GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
rJMSF052L16+ GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
                      ____________________________________________________________
consensus GGGGAAGCTCTCAACCTCAGACTGGTATTGATCTGTTCTCACAACCTGCACCTTTGCCTG
 
. : . : . : . : . : . :
rJMSF040O24+ CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
rJMSF052L16+ CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
rJMFF016L06+ TTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
                      ____________________________________________________________
consensus CCCCTCCTTCAGCAATGCCCATGCCTCAGTCATCATCCATTGATTTTTTTTCAGTACCTG
 
. : . : . : . : . : . :
rJMSF040O24+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
rJMSF052L16+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
rJMFF016L06+ ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
                      ____________________________________________________________
consensus ATCCAGCTGTGAAATCTTCAAAACAAGAGCCCATGAATACTAATATAGTTGATCCCTTTG
 
. : . : . : . : . : . :
rJMSF040O24+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
rJMSF052L16+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
rJMFF016L06+ CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
                      ____________________________________________________________
consensus CTGCAGTTCCATTAAATACATTTGATAGTTCTGACCCATTTGGCTCATTTGTTTCCCAAA
 
. : . : . : . : . : . :
rJMSF040O24+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
rJMSF052L16+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
rJMFF016L06+ CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
                      ____________________________________________________________
consensus CTGATCCTCCTGTATCTGCAACGCCCAATGAGACTGCTACCAGTGGTCTAAATCAAGGAA
 
. : . : . : . : . : . :
rJMSF040O24+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMSF052L16+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMFF016L06+ ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
rJMFF026C11+ TCGGTAGAATCCAAACCCCCACCCCAAGAAGGATGCTTTTCAGGTC
                      ____________________________________________________________
consensus ACTTAAACAATTCTTCGGTAGAATCCAAACCCCCA-CCCAAGAAGGATGCTTTTCAGGTC
 
. : . : . : . : . : . :
rJMSF040O24+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMSF052L16+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMFF016L06+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
rJMFF026C11+ AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
                      ____________________________________________________________
consensus AAGTCTGGAATATGGGCTGATTCTTTAAGCCGTGGACTGATTGATCTTAACATAAGTGCA
 
. : . : . : . : . : . :
rJMSF040O24+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMSF052L16+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMFF016L06+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
rJMFF026C11+ CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
                      ____________________________________________________________
consensus CCGAAGAAAGTGAACCTGTCAGATGTTGGCATTGTTGGTGGATTGACTGACGGATTTGAG
 
. : . : . : . : . : . :
rJMSF040O24+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMSF052L16+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMFF016L06+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
rJMFF026C11+ GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
                      ____________________________________________________________
consensus GAGAAAGACAAGGGACCTACGGTGCAGACGACGTTTTACATGGGGAGAGCGATGGGTCAG
 
. : . : . : . : . : . :
rJMSF040O24+ GGGTCTGGGCTAGGAGAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMSF052L16+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMFF016L06+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
rJMFF026C11+ GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
                      ____________________________________________________________
consensus GGGTCTGGGCTAGGAAAAACCGGGTTTACTTCAAATTCCAAAGATGACATCTTCTCAAGC
 
. : . : . : . : . : . :
rJMSF040O24+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMSF052L16+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMFF016L06+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
rJMFF026C11+ TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
                      ____________________________________________________________
consensus TTTAGCAGCGGTCAACAATATGGTGGCTTCTCAAAATGATTTCCATAAATCTGGCATTTC
 
. : . : . : . : . : . :
rJMSF040O24+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMSF052L16+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMFF016L06+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
rJMFF026C11+ AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
                      ____________________________________________________________
consensus AAATTATGATGATATCCATCCAATTTTCATATATTCTTTCTTTTTGTGAATTTCACAAAG
 
. : . : . : . : . : . :
rJMSF040O24+ AGATCAAATGTTTATTTGTGTGTGCGATCT
rJMSF052L16+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
rJMFF016L06+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
rJMFF026C11+ AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
                      ____________________________________________________________
consensus AGATCAAATGTTTATTTGTGTGTGCGATCTCTTCTTTTTGCGATTGTTTAAAAGTGTGCA
 
. : . : . : . : . : . :
rJMSF052L16+ TTGGTAATGCA
rJMFF016L06+ TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCAT
rJMFF026C11+ TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCATTTTTATGTGCTG
                      ____________________________________________________________
consensus TTGGTAATGCAGTTTTCAGAAACAGGATCAGTAGTTTGAATTTCTCATTTTTATGTGCTG
 
. : . : . : . : . : . :
rJMFF026C11+ CCTGCTCATTTGAAACAGATTTATATGCCCTTCAAAATAGGACCAAGGAATTGTAAAGAA
                      ____________________________________________________________
consensus CCTGCTCATTTGAAACAGATTTATATGCCCTTCAAAATAGGACCAAGGAATTGTAAAGAA
 
. : . : . : . : . : . :
rJMFF026C11+ AAAACAGTGAAGCCCCTTTTGAGTGTGATACAAGTTGCAGGAAAAAAGGAAACAAGAGAG
                      ____________________________________________________________
consensus AAAACAGTGAAGCCCCTTTTGAGTGTGATACAAGTTGCAGGAAAAAAGGAAACAAGAGAG