Contig 012315:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF017F03+                                                                CAATCT
                      ____________________________________________________________
consensus                                                                   CAATCT
 
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rJMFF017F03+          GTACAGTCTTTGAGCTTCTTTGTGTCCTTCTCTATGCACTTGTCTTCCCTAAGTTAGCGA
rJMFF025O23+                                                           TAAGTTAGCGA
                      ____________________________________________________________
consensus             GTACAGTCTTTGAGCTTCTTTGTGTCCTTCTCTATGCACTTGTCTTCCCTAAGTTAGCGA
 
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rJMFF017F03+          TNGTAAAATATTATCACAACAAAGCAGCTTCAGAGGGTTCAAAGACTGTTGCTGCAAATC
rJMFF025O23+          TTGTAAAATATTATCACAACAAAGCAGCTTCAGAGGGTTCAAAGACTGTTGCTGCAAATC
                      ____________________________________________________________
consensus             TTGTAAAATATTATCACAACAAAGCAGCTTCAGAGGGTTCAAAGACTGTTGCTGCAAATC
 
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rJMFF017F03+          TCGCTGCTGGTGGTGTTATGATAGAGACCCCGAATGACCCTATGCTGCAGGCGAATCGAC
rJMFF025O23+          TCGCTGCTGGTGGTGTTATGATAGAGACCCCGAATGACCCTATGCTGCAGGCGAATCGAC
                      ____________________________________________________________
consensus             TCGCTGCTGGTGGTGTTATGATAGAGACCCCGAATGACCCTATGCTGCAGGCGAATCGAC
 
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rJMFF017F03+          TAAGCATCAAAGAGTTATTGATGCAGAACATAGATTATGCACTCGGTATCTTCATGATAT
rJMFF025O23+          TAAGCATCAAAGAGTTATTGATGCAGAACATAGATTATGCACTCGGTATCTTCATGATAT
                      ____________________________________________________________
consensus             TAAGCATCAAAGAGTTATTGATGCAGAACATAGATTATGCACTCGGTATCTTCATGATAT
 
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rJMFF017F03+          ATGTATTGACATTGTCGATTTTTCCTGGATTCTTATCGGAGGACACTGGATCCCACGGCT
rJMFF025O23+          ATGTATTGACATTGTCGATTTTTCCTGGATTCTTATCGGAGGACACTGGATCCCACGGCT
                      ____________________________________________________________
consensus             ATGTATTGACATTGTCGATTTTTCCTGGATTCTTATCGGAGGACACTGGATCCCACGGCT
 
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rJMFF017F03+          TAGGGTCATGGTATGCTCTTGTCCTGATAGCTATGTATAATGTGTGGGATCTGATAGGGA
rJMFF025O23+          TAGGGTCATGGTATGCTCTTGTCCTGATAGCTATGTATAATGTGTGGGATCTGATAGGGA
                      ____________________________________________________________
consensus             TAGGGTCATGGTATGCTCTTGTCCTGATAGCTATGTATAATGTGTGGGATCTGATAGGGA
 
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rJMFF017F03+          GATATTTGCCACTCCTGAAATGGGTAAAGCTTGAATCAAGAAAGGGGATTATGGTGGGCA
rJMFF025O23+          GATATTTGCCACTCCTGAAATGGGTAAAGCTTGAATCAAGAAAGGGGATTATGGTGGGCA
                      ____________________________________________________________
consensus             GATATTTGCCACTCCTGAAATGGGTAAAGCTTGAATCAAGAAAGGGGATTATGGTGGGCA
 
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rJMFF017F03+          TCCTCTTGCGCTACATGCTCATCCCAGCTTTCTACTTCACGTCCAATTCCATCAGCCGCC
rJMFF025O23+          TCCTCTTGCGCTACATGCTCATCCCAGCTTTCTACTTCACGTCCAATTCCATCAGCCGCC
                      ____________________________________________________________
consensus             TCCTCTTGCGCTACATGCTCATCCCAGCTTTCTACTTCACGTCCAATTCCATCAGCCGCC
 
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rJMFF017F03+          TCACCGGAGATCAAGCAACTCTCTGGTACTGATGACCGAACTTNCGTTCCCTCTGGTAGA
rJMFF025O23+          TCACCGGAGATCAAGCAACTCTCTGGTACTGATGACCGAACTTTCGTTCCCTCTGGTAGA
                      ____________________________________________________________
consensus             TCACCGGAGATCAAGCAACTCTCTGGTACTGATGACCGAACTTTCGTTCCCTCTGGTAGA
 
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rJMFF017F03+          TGATCTGATCAGAATATGCTTCAACTGCTGCATATCCATCCCATTCGGCTTCATAGGAGG
rJMFF025O23+          TGATCTGATCAGAATATGCTTCAACTGCTGCATATCCATCCCATTCGGCTTCATAGGAGG
                      ____________________________________________________________
consensus             TGATCTGATCAGAATATGCTTCAACTGCTGCATATCCATCCCATTCGGCTTCATAGGAGG
 
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rJMFF017F03+          AGAGTGGGTGTATTTTAGGACTTTAGGGATTGAATTTTCTTGTTAATAGTGCTCCCCTGT
rJMFF025O23+          AGAGTGGGTGTATTTTAGGACTTTAGGGATTGAATTTTCTTGTTAATAGTGCTCCCCTGT
                      ____________________________________________________________
consensus             AGAGTGGGTGTATTTTAGGACTTTAGGGATTGAATTTTCTTGTTAATAGTGCTCCCCTGT
 
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rJMFF017F03+          AGGATGAAGTTTAGCAATTAGCAGGCTGTGATCTCCCATCACAAGTTGTATAATATGCAT
rJMFF025O23+          AGGATGAAGTTTAGCAATTAGCAGGCTGTGATCTCCCATCACAAGTTGTATAATATGCAT
                      ____________________________________________________________
consensus             AGGATGAAGTTTAGCAATTAGCAGGCTGTGATCTCCCATCACAAGTTGTATAATATGCAT
 
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rJMFF017F03+          TCCTATCCTATTCTCCGGGCTCTCTCCCTTTTTTAATCGGAGATTAGCCCTCAATAAACA
rJMFF025O23+          TCCTATCCTATTCTCCGGGCTCTCTCCCTTTTTTAATCGGAGATTAGCCCTCAATAAACA
                      ____________________________________________________________
consensus             TCCTATCCTATTCTCCGGGCTCTCTCCCTTTTTTAATCGGAGATTAGCCCTCAATAAACA