Contig 012305:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024C11Sequence533012305 (2)ref|XP_009591962.1|163PREDICTED: uncharacterized protein LOC104088904 [Nicotiana tomentosiformis] ref|792012305 (2)ref|XP_006350362.1|237PREDICTED: uncharacterized protein LOC102588036 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF024C11-                         GAGGGTGTAGGGTTTATCGAAAATGGCTGTTTCATTCGCCTCAAAC
                      ____________________________________________________________
consensus                           GAGGGTGTAGGGTTTATCGAAAATGGCTGTTTCATTCGCCTCAAAC
 
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JMFF024C11-           ACCATTCTGCAATATGCCAATCTTTCCCAAATCAAGCTACATTACAATCTTTTCTCTACT
                      ____________________________________________________________
consensus             ACCATTCTGCAATATGCCAATCTTTCCCAAATCAAGCTACATTACAATCTTTTCTCTACT
 
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JMFF024C11-           GCCGAAAGAAGAAATACTATTTTCCAAAAAGCTCCACCCCGAAGCTTGAAATTCACAGTT
                      ____________________________________________________________
consensus             GCCGAAAGAAGAAATACTATTTTCCAAAAAGCTCCACCCCGAAGCTTGAAATTCACAGTT
 
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JMFF024C11-           AGAAATCAGGGGTTTGCTCTGAATAAGGAGGAGATTTCTTCCGATTTTGATTGGGATGAA
                      ____________________________________________________________
consensus             AGAAATCAGGGGTTTGCTCTGAATAAGGAGGAGATTTCTTCCGATTTTGATTGGGATGAA
 
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JMFF024C11-           CTAGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAGGGCTCACCATGGGAAGGTGCT
                      ____________________________________________________________
consensus             CTAGACCAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAGGGCTCACCATGGGAAGGTGCT
 
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JMFF024C11-           GTGGTTTACCGAAGAAATCCTTCGGTTTCGCACTTGGAGTATTGCACCACCCTAGAAAGG
                      ____________________________________________________________
consensus             GTGGTTTACCGAAGAAATCCTTCGGTTTCGCACTTGGAGTATTGCACCACCCTAGAAAGG
 
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JMFF024C11-           CTTGGCCTTGGGAAGCTTTCCACTAAGGTTTCTAAGTCTCGCGCTTCGGTGATGGGAATC
rJMFF024C11+                                                          GTGATGGGAATC
                      ____________________________________________________________
consensus             CTTGGCCTTGGGAAGCTTTCCACTAAGGTTTCTAAGTCTCGCGCTTCGGTGATGGGAATC
 
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JMFF024C11-           AGGGTTACCAAAGACGTCAAGGATTACCCGGAAGGGACGCCGGTGCTGGTTTCACTCGAT
rJMFF024C11+          AGGNTTCCCAAAGACGTCAAGGATTACCCGGAAGGGACGCCGGTGCTGGTTTCACTCGAT
                      ____________________________________________________________
consensus             AGGGTTCCCAAAGACGTCAAGGATTACCCGGAAGGGACGCCGGTGCTGGTTTCACTCGAT
 
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JMFF024C11-           GTAACCACCAAGAAGCACAAGGTGATCAGGCTCGATGGGATTATCCGAACAGTCATTACT
rJMFF024C11+          GTAACCACCAAGAAGCACAAGGTGATCAGGCTCGATGGGATTATCCGAACAGTCATTACT
                      ____________________________________________________________
consensus             GTAACCACCAAGAAGCACAAGGTGATCAGGCTCGATGGGATTATCCGAACAGTCATTACT
 
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JMFF024C11-           CTTGATT                                                     
rJMFF024C11+          CTTGATTGCAACAGGTGTGGTGAACCAGCTCCTGAAACTATTTTTTCTAACTTCTCACTC
                      ____________________________________________________________
consensus             CTTGATTGCAACAGGTGTGGTGAACCAGCTCCTGAAACTATTTTTTCTAACTTCTCACTC
 
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rJMFF024C11+          TTGCTGAGTGAAGAACCCATTAAGGAAGCAGACACCCTGGACATGGGTACAATGTTTGGA
                      ____________________________________________________________
consensus             TTGCTGAGTGAAGAACCCATTAAGGAAGCAGACACCCTGGACATGGGTACAATGTTTGGA
 
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rJMFF024C11+          TCCAAGAATTTTGAAGCAGTAGAGGAAGATGACGACGATTCTATGATTGATATTGAAGAT
                      ____________________________________________________________
consensus             TCCAAGAATTTTGAAGCAGTAGAGGAAGATGACGACGATTCTATGATTGATATTGAAGAT
 
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rJMFF024C11+          CAACTTTATTTTCCTTTGGAAAACAGAACCATTGACATCTCAAAGAATATAAGAGACTTG
                      ____________________________________________________________
consensus             CAACTTTATTTTCCTTTGGAAAACAGAACCATTGACATCTCAAAGAATATAAGAGACTTG
 
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rJMFF024C11+          GTGCACATAGAAATCAGTCTTGATGCCATCTGTGATCCCCAATGCAAGGGTTTATGTTTG
                      ____________________________________________________________
consensus             GTGCACATAGAAATCAGTCTTGATGCCATCTGTGATCCCCAATGCAAGGGTTTATGTTTG
 
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rJMFF024C11+          AGATGTGGTACAAATCTCAATATTCAGAGCTGCAAGTGTGTTGAACAAAATGTGGAGGCA
                      ____________________________________________________________
consensus             AGATGTGGTACAAATCTCAATATTCAGAGCTGCAAGTGTGTTGAACAAAATGTGGAGGCA
 
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rJMFF024C11+          AAAGGTTTTAGTCCTCTTGGTGGTCTGAGAAACAAAATGCAATGATTATGATGATCATAG
                      ____________________________________________________________
consensus             AAAGGTTTTAGTCCTCTTGGTGGTCTGAGAAACAAAATGCAATGATTATGATGATCATAG
 
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rJMFF024C11+          TGGAATTCATGTATGTATGTATGTATGTATGTTTCTATATAAGACTACTACATACATTCA
                      ____________________________________________________________
consensus             TGGAATTCATGTATGTATGTATGTATGTATGTTTCTATATAAGACTACTACATACATTCA
 
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rJMFF024C11+          TTCTTTGTGTAACACTGCTGTTTAACAAATAACAAGCACCCATTTCGATCACGAATGTAA
                      ____________________________________________________________
consensus             TTCTTTGTGTAACACTGCTGTTTAACAAATAACAAGCACCCATTTCGATCACGAATGTAA
 
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rJMFF024C11+          TCTATTGAGTAAGGGGGTAGCACTTGCACTTATGGTTGTTCACCTTTCGTCTCCTCTTGA
                      ____________________________________________________________
consensus             TCTATTGAGTAAGGGGGTAGCACTTGCACTTATGGTTGTTCACCTTTCGTCTCCTCTTGA
 
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rJMFF024C11+          TAGCATATTGAAATATGTACTACACTTTAACTAGATTTTAAGCTATTTGGAGAACACAAA
                      ____________________________________________________________
consensus             TAGCATATTGAAATATGTACTACACTTTAACTAGATTTTAAGCTATTTGGAGAACACAAA