| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018F02 | Sequence | 556 | 008774 (3) | ref|XP_009768067.1| | 8e-85 | PREDICTED: crocetin glucoside glucosyltransferase-like [Nicotiana sylvestris] | 748 | 012298 (3) | ref|XP_010318090.1| | 2e-44 | PREDICTED: LOW QUALITY PROTEIN: crocetin glucoside glucosyltransferase-like [So |
| JMFF018K09 | Sequence | 501 | 008774 (3) | ref|XP_009768067.1| | 4e-75 | PREDICTED: crocetin glucoside glucosyltransferase-like [Nicotiana sylvestris] | 781 | 012298 (3) | ref|XP_010318090.1| | 3e-52 | PREDICTED: LOW QUALITY PROTEIN: crocetin glucoside glucosyltransferase-like [So |
| JMFF020L08 | Sequence | 538 | 008774 (3) | ref|XP_009768067.1| | 6e-85 | PREDICTED: crocetin glucoside glucosyltransferase-like [Nicotiana sylvestris] | 765 | 012298 (3) | ref|XP_010318090.1| | 2e-43 | PREDICTED: LOW QUALITY PROTEIN: crocetin glucoside glucosyltransferase-like [So |
This contig is upended
. : . : . : . : . : . :
rJMFF018K09+ CTCTAGGGTTAGAGCTAAGCAAGG
____________________________________________________________
consensus CTCTAGGGTTAGAGCTAAGCAAGG
. : . : . : . : . : . :
rJMFF018K09+ TGAACTTCCTATGGGTGATTAGGTTTCCGGCGGCCGAGGCCGGGGAAAAAGCTAGGGCTG
rJMFF018F02+ GTGATTAGGTTTCCGNCGGCCGAGNCCGGGGAAAAAGCTAGGGCTG
rJMFF020L08+ GTGATTAGGTTTCCGGCGGCCGAGNCCGGGGAAAAAGCTAGGGCTA
____________________________________________________________
consensus TGAACTTCCTATGGGTGATTAGGTTTCCGGCGGCCGAGGCCGGGGAAAAAGCTAGGGCTG
. : . : . : . : . : . :
rJMFF018K09+ TTGGGGACGCCCTGCCGGAGGGGTATCTGGAGAGAGTGGGGAAGCGGGGGAAAGTGGTGG
rJMFF018F02+ TTGGGGACGCCCTGCCGGAGGGGTATCTGGAGAGAGTGGGGAAGCGGGGGAAAGTGGTGG
rJMFF020L08+ TTGGGGACGCCCTGCCGGAGGGGTATCTGGAGAGAGTGGGGAAGCGGGGGAAAGTGGTGG
____________________________________________________________
consensus TTGGGGACGCCCTGCCGGAGGGGTATCTGGAGAGAGTGGGGAAGCGGGGGAAAGTGGTGG
. : . : . : . : . : . :
rJMFF018K09+ AGGGATGGGCCCCGCAAGGGATGATTCTAGAACATTCGAGTATCGGCGGATTCGTGAGCC
rJMFF018F02+ AGGGATGGGCCCCGCAAGGGATGATTCTAGAACATTCGAGTATCGGCGGATTCGTGAGCC
rJMFF020L08+ AGGGATGGGCCCCGCAAGGGATGATTCTAGAACATTCGAGTATCGGCGGATTCGTGAGCC
____________________________________________________________
consensus AGGGATGGGCCCCGCAAGGGATGATTCTAGAACATTCGAGTATCGGCGGATTCGTGAGCC
. : . : . : . : . : . :
rJMFF018K09+ ACTGCGGGTGGAGCTCAGTGATGGAGGCGCTGAAATTCGGCGTCCCGATAATCGCGATGC
rJMFF018F02+ ACTGCGGGTGGAGCTCAGTGATGGAGGCGCTGAAATTCGGCGTCCCGATAATCGCGATGC
rJMFF020L08+ ACTGCGGGTGGAGCTCAGTGATGGAGGCGCTGAAATTCGGCGTCCCGATAATCGCGATGC
____________________________________________________________
consensus ACTGCGGGTGGAGCTCAGTGATGGAGGCGCTGAAATTCGGCGTCCCGATAATCGCGATGC
. : . : . : . : . : . :
rJMFF018K09+ CGATGCAGCTAGACCAGCCGCTGAACGCGAGGGTGGTGGCGGCGGCGGGGGTAGGGGAGG
rJMFF018F02+ CGATGCAGCTAGACCAGCCGCTGAACGCGAGGGTGGTGGCGGCGGCGGGGGTAGGGGAGG
rJMFF020L08+ CGATGCAGCTAGACCAGCCGCTGAACGCGAGGGTGGTGGCGGCGGCGGGGGTAGGGGAGG
____________________________________________________________
consensus CGATGCAGCTAGACCAGCCGCTGAACGCGAGGGTGGTGGCGGCGGCGGGGGTAGGGGAGG
. : . : . : . : . : . :
rJMFF018K09+ AAGTGGTGAGGGACGGGGAGGGGAGGGTGGAGAGAGAGGAGGTGGCGAGGGTGGTGAGGG
rJMFF018F02+ AAGTGGTGAGGGACGGGGAGGGGAGGGTGGAGAGAGAGGAGGTGGCGAGGGTGGTGAGGG
rJMFF020L08+ AAGTGGTGAGGGACGGGGAGGGGAGGGTGGAGAGAGAGGAGGTGGCGAGGGTGGTGAGGG
____________________________________________________________
consensus AAGTGGTGAGGGACGGGGAGGGGAGGGTGGAGAGAGAGGAGGTGGCGAGGGTGGTGAGGG
. : . : . : . : . : . :
rJMFF018K09+ AAGTGGTGGCGGAGAAGAGCGGGCAGCGGTTGCGGCGGAGGGCGAGGGAGTTCAGTGAGA
rJMFF018F02+ AAGTGGTGGCGGAGAAGAGCGGGCAGCGGTTGCGGCGGAGGGCGAGGGAGTTCAGTGAGA
rJMFF020L08+ AAGTGGTGGCGGAGAAGAGCGGGCAGCGGTTGCGGCGGAGGGCGAGGGAGTTCAGTGAGA
____________________________________________________________
consensus AAGTGGTGGCGGAGAAGAGCGGGCAGCGGTTGCGGCGGAGGGCGAGGGAGTTCAGTGAGA
. : . : . : . : . : . :
rJMFF018K09+ AGATAATGAGCGAGAGAGGGGAGGAAGAGATGGATGAGGCGGTGCAGGAGTTGACAACGC
rJMFF018F02+ AGATAATGAGCGAGAGAGGGGAGGAAGAGATGGATGAGGCGGTGCAGGAGTTGACAACGC
rJMFF020L08+ AGATAATGAGCGAGAGAGGGGAGGAAGAGATGGATGAGGCGGTGCAGGAGTTGACAACGC
____________________________________________________________
consensus AGATAATGAGCGAGAGAGGGGAGGAAGAGATGGATGAGGCGGTGCAGGAGTTGACAACGC
. : . : . : . : . : . :
rJMFF018K09+ TTTGTCAGACGAAGACGTTTAGACAAGACTCCGCCGACGTCAACTACATACGGTTTAGTC
rJMFF018F02+ TTTGTCAGACGAAGACGTTTAGACAAGACTCCGCCGACGTCAACTACATACGGTTTAGTC
rJMFF020L08+ TTTGTCAGACGAAGACGTTTAGACAAGACTCCGCCGACGTCAACTACATACGGTTTAGTC
____________________________________________________________
consensus TTTGTCAGACGAAGACGTTTAGACAAGACTCCGCCGACGTCAACTACATACGGTTTAGTC
. : . : . : . : . : . :
rJMFF018K09+ TTGGTGGCTGAGACTAAGACTAAATGATAGCTAAAAATAATATGGCAAGCCTTACTGTTT
rJMFF018F02+ TTGGTGGCTGAGACTAAGACTAAATGATAGCTAAAAATAATATGGCAAGCCTTACTGTTT
rJMFF020L08+ TTGGTGGCTGAGACTAAGACTAAATGATAGCTAAAAATAATATGGCAAGCCTTACTGTTT
____________________________________________________________
consensus TTGGTGGCTGAGACTAAGACTAAATGATAGCTAAAAATAATATGGCAAGCCTTACTGTTT
. : . : . : . : . : . :
rJMFF018K09+ CTATTTTCTTTTTGCCCACCTTGTTTATATTTTGTTATGCAGATGCAATAAGTTGAATTT
rJMFF018F02+ CTATTTTCTTTTTGCCCACCTTGTTTATATTTTGTTATGCAGATG-AATAAGTTGAATTT
rJMFF020L08+ CTATTTTCTTTTTGCCCACCTTGTTTATATTTTGTTATGCAGATG-AATAAGTTGAATTT
____________________________________________________________
consensus CTATTTTCTTTTTGCCCACCTTGTTTATATTTTGTTATGCAGATG-AATAAGTTGAATTT
. : . : . : . : . : . :
rJMFF018K09+ GAATTAATTTTTACAAATTGAGTTGAATTTGAATTAATTGTTTATGACTAAAGTATAACT
rJMFF018F02+ GAATTAATTTTTACAAATTGAGTTGAATTTGAATTAATTGTTTATGACTAAAGTATAACT
rJMFF020L08+ GAATTAATTTTTACAAATTGAGTTGAATTTGAATTAATTGTTTATGACTAAAGTATAACT
____________________________________________________________
consensus GAATTAATTTTTACAAATTGAGTTGAATTTGAATTAATTGTTTATGACTAAAGTATAACT
. : . : . : . : . : . :
rJMFF018K09+ AAGACTGCCCGATGATGNGTNTAAAGNGACTCACTCA
rJMFF018F02+ AAGACTGCCCGATGATGGGTATAAAGTGACTCACTCA
rJMFF020L08+ AAGACTGCCCGATGATGGGTATAAAGTGACTCACTCAAATNAAATGTCACTGNTTCATCG
____________________________________________________________
consensus AAGACTGCCCGATGATGGGTATAAAGTGACTCACTCAAATNAAATGTCACTGNTTCATCG