Contig 012285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009K17Sequence551000043 (4)ref|XP_009616415.1|2e-78PREDICTED: V-type proton ATPase subunit d2 [Nicotiana tomentosiformis] ref|XP_00721012285 (4)gb|KDO72501.1|1e-99hypothetical protein CISIN_1g018459mg [Citrus sinensis]
JMFF018F06Sequence640000043 (4)ref|XP_009616415.1|5e-118PREDICTED: V-type proton ATPase subunit d2 [Nicotiana tomentosiformis] ref|XP_00791012285 (4)gb|KJB33309.1|1e-87hypothetical protein B456_006G025300 [Gossypium raimondii]
JMFF033D11Sequence435012285 (4)gb|KDO72501.1|2e-60hypothetical protein CISIN_1g018459mg [Citrus sinensis]
JMSF033J06Sequence678000043 (4)ref|XP_009765131.1|6e-120PREDICTED: V-type proton ATPase subunit d2 [Nicotiana sylvestris] ref|XP_0097651782012285 (4)gb|KDO72501.1|2e-124hypothetical protein CISIN_1g018459mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033J06+ GCTCCATATTCTCTGAGTGCATACTTCAGAGGACTTGGATGACATGAATATTGAGA
                      ____________________________________________________________
consensus GCTCCATATTCTCTGAGTGCATACTTCAGAGGACTTGGATGACATGAATATTGAGA
 
. : . : . : . : . : . :
rJMSF033J06+ TTATGAGGAATACCCTGTACAAGGCATACCNTGAGGATTTTTACAAATTTTGCCAGAAAC
rJMFF009K17+ TACAAATTTTGCCAGAAAC
                      ____________________________________________________________
consensus TTATGAGGAATACCCTGTACAAGGCATACCNTGAGGATTTTTACAAATTTTGCCAGAAAC
 
. : . : . : . : . : . :
rJMSF033J06+ TGGGTGGTGCTACTGCAGAAATCATGTCAGACTTGCTTTCTTTTGAGGCTGACAGAAGAG
rJMFF009K17+ TGGGTGGTGCTACTGCAGAAATCATGTCAGACTTGCTTTCTTTTGAGGCTGACAGAAGAG
rJMFF018F06+ TGACAGAAGAG
                      ____________________________________________________________
consensus TGGGTGGTGCTACTGCAGAAATCATGTCAGACTTGCTTTCTTTTGAGGCTGACAGAAGAG
 
. : . : . : . : . : . :
rJMSF033J06+ CTGTTAATATCACCATAAACAGCATTGGCACTGAGCTCACTAGGGAAGACCGCAAGAAGT
rJMFF009K17+ CTGTTAATATCNCCATAAACAGCATTGGCANTGAGCTCACTAGGGAAGACCGCAAGAAGT
rJMFF018F06+ CTGTTAATATCACCATAAACAGCATTGGCACTGAGCTCACTAGGGAAGACCGCAAGAAGT
                      ____________________________________________________________
consensus CTGTTAATATCACCATAAACAGCATTGGCACTGAGCTCACTAGGGAAGACCGCAAGAAGT
 
. : . : . : . : . : . :
rJMFF033D11+ CTTATGGTCATGAGGAGCTTGCTATCTGCGAAG
rJMSF033J06+ TATATTCTAATTTTGGTCTACTTTATCCTTATGGTCATGAGGAGCTTGCTATCTGCGAAG
rJMFF009K17+ TATATTCTAATTTTGGTCTACTTTATCCTTATGGTCATGAGGAGCTTGCTATCTGNGAAG
rJMFF018F06+ TATATTCTAATTTTGGTCTACTTTATCCTTATGGTCATGAGGAGCTTGCTATCTGCGAAG
                      ____________________________________________________________
consensus TATATTCTAATTTTGGTCTACTTTATCCTTATGGTCATGAGGAGCTTGCTATCTGCGAAG
 
. : . : . : . : . : . :
rJMFF033D11+ ATATTGATCAGGTTCGTGGTGTCATGGAAAAATACCCTCCATATCAATCCATATTTTCCA
rJMSF033J06+ ATATTGATCAGGTTCGTGGTGTCATGGAAAAATACCCTCCATATCAATCCATATTTTCCA
rJMFF009K17+ ATATTGATCAGGTTCGTGGTGTCATGGAAAAATACCCTCCATATCAATCCATATTTTCCA
rJMFF018F06+ ATATTGATCAGGTTCGTGGTGTCATGGAAAAATACCCTCCATATCAATCCATATTTTCCA
                      ____________________________________________________________
consensus ATATTGATCAGGTTCGTGGTGTCATGGAAAAATACCCTCCATATCAATCCATATTTTCCA
 
. : . : . : . : . : . :
rJMFF033D11+ AATTATCCTATGGGGAGAGCCAGATTCTTGACAAGGCTTTCTATGAGGAAGAAGTCAAAC
rJMSF033J06+ AATTATCCTATGGGGAGAGCCAGATTCTTGACAAGGCTTTCTATGAGGAAGAAGTCAAAC
rJMFF009K17+ AATTATCCTATGGGGAGAGCCAGATTCTTGACAAGGCTTTCTATGAGGAAGAAGTCAAAC
rJMFF018F06+ AATTATCCTATGGGGAGAGCCAGATTCTTGACAAGGCTTTCTATGAGGAAGAAGTCAAAC
                      ____________________________________________________________
consensus AATTATCCTATGGGGAGAGCCAGATTCTTGACAAGGCTTTCTATGAGGAAGAAGTCAAAC
 
. : . : . : . : . : . :
rJMFF033D11+ GTCTTTGCTTGGCATTTGAGCAGCAGTTCCNCTATGGCGTATTCTTTGCATATGTAAGGT
rJMSF033J06+ GTCTTTGCTTGGCATTTGAGCAGCAGTTCCACTATGGCGTATTCTTTGCATATGTAAGGT
rJMFF009K17+ GTCTTTGCTTGGCATTNGAGCAGCAGTTCCACTATGGCGTATTCTTTGCATATGTAAGGT
rJMFF018F06+ GTCTTTGCTTGGCATTTGAGCAGCAGTTCCACTATGGCGTATTCTTTGCATATGTAAGGT
                      ____________________________________________________________
consensus GTCTTTGCTTGGCATTTGAGCAGCAGTTCCACTATGGCGTATTCTTTGCATATGTAAGGT
 
. : . : . : . : . : . :
rJMFF033D11+ TGAGAGAGCAGGAAATCAGGAACNTGATGTGGATATCNGAANGTGTGGCTCAGAACCAAA
rJMSF033J06+ TGAGAGAGCAGGAAATCAGGAACTTGATGTGGATATCTGAATGTGTGGCTCAGAACCAAA
rJMFF009K17+ TGAGAGAGCAGGAAATCAGGAACTTGATGTGGATATCTGAATGTGTGGCTCAGGACCAAA
rJMFF018F06+ TGAGAGAGCAGGAAATCAGGAACTTGATGTGGATATCTGAATGTGTGGCTCAGAACCAAA
                      ____________________________________________________________
consensus TGAGAGAGCAGGAAATCAGGAACTTGATGTGGATATCTGAATGTGTGGCTCAGAACCAAA
 
. : . : . : . : . : . :
rJMFF033D11+ AATCCAGAGTGCACGACAGTGNTGTTTTCATATTNTAATTTTTCTTAATTTATTAGGAAG
rJMSF033J06+ AATCCAGAGTGCACGACAGTGTTGTTTTCATATTTTAATTTTTCTTAATTTATTAGGAAG
rJMFF009K17+ AATCCAGAGTGCACGNCAGTGTTGTTTTCATATTTTAATTTTTCTTAATTTATTAGGAAG
rJMFF018F06+ AATCCAGAGTGCACGACAGTGTTGTTTTCATATTTTAATTTTTCTTAATTTATTAGGAAG
                      ____________________________________________________________
consensus AATCCAGAGTGCACGACAGTGTTGTTTTCATATTTTAATTTTTCTTAATTTATTAGGAAG
 
. : . : . : . : . : . :
rJMFF033D11+ TCTGGTATACTTCTCCATAATCTTAAGTTNTTNGGGGANCTATTTNTGGANGTAATNGCC
rJMSF033J06+ TCTGGTATACTTCTCCATAATCTTAAGTTTTTCGGGGAACTATTTCTGGATGTAATTGCC
rJMFF009K17+ TNTGGTATACTTCTCCATAATCTTAAGTTTTTCGGGGAACTATTTCTGGATGTAATTGCC
rJMFF018F06+ TCTGGTATACTTCTCCATAATCTTAAGTTTTTCGGGGAACTATTTCTGGATGTAATTGCC
                      ____________________________________________________________
consensus TCTGGTATACTTCTCCATAATCTTAAGTTTTTCGGGGAACTATTTCTGGATGTAATTGCC
 
. : . : . : . : . : . :
rJMFF033D11+ GACAGCCCCCNNGATTTTANGTTGCTANGCCTC
rJMSF033J06+ GACAGCCCCCTTGATTTTATGTTGCTATGCCTCTGCCCCTTCTATTCGTTCTGTGTCTTG
rJMFF009K17+ GACAGCCCCCTTGATTTTATGTTGCTATGCCTCTGCCCCTTCTATTCGTTCTGTGTCTTG
rJMFF018F06+ GACAGCCCCCTTGATTTTATGTTGCTATGCCTCTGCCCCTTCTATTCGTTCTGTGTCTTG
                      ____________________________________________________________
consensus GACAGCCCCCTTGATTTTATGTTGCTATGCCTCTGCCCCTTCTATTCGTTCTGTGTCTTG
 
. : . : . : . : . : . :
rJMSF033J06+ GAGGCTGATTGGCCGATGACAATAAGTTGGAAAGATACATTGTTCCGCCCTTAAAGCATT
rJMFF009K17+ GAGGCTGATTGGCCGATGACAATAAGTTGGAAAGATCCATTGTTCCGCCCTTNAAGCATT
rJMFF018F06+ GAGGCTGATTGGCCGATGACAATAAGTTGGAAAGATACATTGTTCCGCCCTTAAAGCATT
                      ____________________________________________________________
consensus GAGGCTGATTGGCCGATGACAATAAGTTGGAAAGATACATTGTTCCGCCCTTAAAGCATT
 
. : . : . : . : . : . :
rJMSF033J06+ TGCTGC
rJMFF009K17+ NGCTGCTTAATAAGTCAATGTATGTAAGGT
rJMFF018F06+ TGCTGCTTAATAAGTCAATGTATGTAAGGTTGAACTCGAGTCAGGTTTGATTTCATTATT
                      ____________________________________________________________
consensus TGCTGCTTAATAAGTCAATGTATGTAAGGTTGAACTCGAGTCAGGTTTGATTTCATTATT
 
. : . : . : . : . : . :
rJMFF018F06+ TGTATCTCAATTTGTTATTATTATGGAGTAAGTTGTTCTAGAGCGTAATGTATGTATTGT
                      ____________________________________________________________
consensus TGTATCTCAATTTGTTATTATTATGGAGTAAGTTGTTCTAGAGCGTAATGTATGTATTGT
 
. : . : . : . : . : . :
rJMFF018F06+ TACAGCTAGCTTGCCTTGTTGGCCACTGAAACGCTACCACCTTCATTTCTATAAAGAATT
                      ____________________________________________________________
consensus TACAGCTAGCTTGCCTTGTTGGCCACTGAAACGCTACCACCTTCATTTCTATAAAGAATT