clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006G21 | Sequence | 516 | 012276 (6) | ref|XP_011097933.1| | 1e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] | 632 | 012276 (6) | ref|XP_011097933.1| | 5e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] |
JMFF016N12 | Sequence | 516 | 012276 (6) | ref|XP_011097933.1| | 1e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] | 620 | 012276 (6) | ref|XP_011097933.1| | 4e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] |
JMFN029D17 | Sequence | 629 | 012276 (6) | ref|XP_011097933.1| | 4e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] | |||||
JMFN030H10 | Sequence | 526 | 012276 (6) | ref|XP_011097933.1| | 7e-69 | PREDICTED: probable histone H2A.3 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFN030H10+ AAAAT
____________________________________________________________
consensus AAAAT
. : . : . : . : . : . :
JMFN030H10+ CAAATAAACACCTCCTCCCCACCCAAACAAGACAAAAATCTGGCCTCGATCCATCTAATC
JMFF016N12+ CAAACAAGACAAAAATCCGGCCTCGATCCATCTAATC
JMFF006G21+ CAAACAAGACAAAAATCCGGCCTCGATCCATCTAATC
____________________________________________________________
consensus CAAATAAACACCTCCTCCCCACCCAAACAAGACAAAAATCCGGCCTCGATCCATCTAATC
. : . : . : . : . : . :
JMFN030H10+ CTCATCAACGGGCTTTGAGGAGCCACCAGTCTTCTTCGGGAGCAAGAGATTGTGAATGTT
JMFF016N12+ CTCATCAACGGGCTTTGAGGAGCCACCAGTCTTCTTCGGGAGCAAGAGATTGTGAATGTT
rJMFF006G21- CTTCTTCGGGAGCAAGAGATTGTGAATGTT
JMFN029D17+ TTGTGAATGTT
JMFF006G21+ CTCATCAACGGGCTTTGAGGAGCCACCAGTCTTCTTCGGGAGCAAGAGATTGTGAATGTT
rJMFF016N12- CTTCTTCGGGAGCAAGAGATTGTGAATGTT
____________________________________________________________
consensus CTCATCAACGGGCTTTGAGGAGCCACCAGTCTTCTTCGGGAGCAAGAGATTGTGAATGTT
. : . : . : . : . : . :
JMFN030H10+ CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
JMFF016N12+ CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
rJMFF006G21- CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
JMFN029D17+ CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
JMFF006G21+ CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
rJMFF016N12- CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
____________________________________________________________
consensus CGGCATCACACCACCATTGGCAATAGTCACATCTCCAAGAAGCTTGCTCAGCTCCTCATC
. : . : . : . : . : . :
JMFN030H10+ GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
JMFF016N12+ GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
rJMFF006G21- GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
JMFN029D17+ GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
JMFF006G21+ GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
rJMFF016N12- GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
____________________________________________________________
consensus GTTCCTCACAGCCAATTGGATGTGCCTCGGCACGATCCTAGTCTTCTTGTTGTCCCTCGC
. : . : . : . : . : . :
JMFN030H10+ AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
JMFF016N12+ AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
rJMFF006G21- AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
JMFN029D17+ AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
JMFF006G21+ AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
rJMFF016N12- AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
____________________________________________________________
consensus AGCATTTCCAGCCAATTCAAGCACCTCAGCGGCAAGGTATTCGAGGACGGCGGCGAGATA
. : . : . : . : . : . :
JMFN030H10+ GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
JMFF016N12+ GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
rJMFF006G21- GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
JMFN029D17+ GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
JMFF006G21+ GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
rJMFF016N12- GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
____________________________________________________________
consensus GACGGGAGCTCCGGCACCGACACGCTCGGCGTACTTGCCGGCCTTGAGGAAACGGGCGAT
. : . : . : . : . : . :
JMFN030H10+ ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTGTTGGCAGG
JMFF016N12+ ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
rJMFF006G21- ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
JMFN029D17+ ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
JMFF006G21+ ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
rJMFF016N12- ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
____________________________________________________________
consensus ACGGCCGACGGGGAACTGGAGACCGGCCTTGCTGCTACGAGACTGAGCCTTCTTGGCAGG
. : . : . : . : . : . :
JMFN030H10+ ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
JMFF016N12+ ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
rJMFF006G21- ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
JMFN029D17+ ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
JMFF006G21+ ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
rJMFF016N12- ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
____________________________________________________________
consensus ACCGGAACCAAGGGTTTTGCCACGACCCGCCATTGCTGTTTTAGTATTACGACTGAAGAA
. : . : . : . : . : . :
JMFN030H10+ GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGT
JMFF016N12+ GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGTTAACAAAATACTG
rJMFF006G21- GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGTTAACAAAATACTG
JMFN029D17+ GGGGTACAAAAGAGGGATTCGCTGTGAAATT
JMFF006G21+ GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGTTAACAAAATACTG
rJMFF016N12- GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGTTAACAAAATACTGGTTACTTT
____________________________________________________________
consensus GGGGTACAAAAGAGGGATTCGCTGTGAAATTCAAGCGGTTAACAAAATACTGGTTACTTT