| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014D04 | Sequence | 638 | 010226 (3) | ref|XP_006357808.1| | 9e-75 | PREDICTED: MATE efflux family protein 9-like [Solanum tuberosum] | 796 | 012267 (4) | ref|XP_004232021.1| | 1e-99 | PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum] |
| JMFF023H18 | Sequence | 485 | 010226 (3) | ref|XP_006357808.1| | 1e-43 | PREDICTED: MATE efflux family protein 9-like [Solanum tuberosum] | 730 | 012267 (4) | ref|XP_004232021.1| | 2e-84 | PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum] |
| JMFN013D07 | Sequence | 624 | 012267 (4) | ref|XP_004232021.1| | 2e-75 | PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum] | |||||
| JMFN036L17 | Sequence | 604 | 012267 (4) | ref|XP_004232021.1| | 1e-65 | PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF023H18- TAATATATATATATATCAAAATT
rJMFF014D04- TATATATATCAAAATT
____________________________________________________________
consensus TAATATATATATATATCAAAATT
. : . : . : . : . : . :
JMFN013D07+ AATGAATGTAAAACAAGTAAATA
rJMFF023H18- CTACATTGGATCTGATTGTAGAGTAACAGATGTTCACAATGAATGTAAAACAAGTAAATA
rJMFF014D04- CTACATTGGATCTGATTGTAGAGTAACAGATGTTCACAATGAATGTAAAACAAGTAAATA
____________________________________________________________
consensus CTACATTGGATCTGATTGTAGAGTAACAGATGTTCACAATGAATGTAAAACAAGTAAATA
. : . : . : . : . : . :
JMFN013D07+ TACTAATTAAGATTCGATAAGAGAGTATAAAAGTGCCAGCTTAAATGATTACCTCAGAAA
rJMFF023H18- TACTAATTAAGATTCGATAAGAGAGTATAAAAGTGCCAGCTTAAATGATTACCTCAGAAA
rJMFF014D04- TACTAATTAAGATTCGATAAGAGAGTATAAAAGTGCCAGCTTAAATGATTACCTCAGAAA
____________________________________________________________
consensus TACTAATTAAGATTCGATAAGAGAGTATAAAAGTGCCAGCTTAAATGATTACCTCAGAAA
. : . : . : . : . : . :
JMFN036L17+ TTTCAATTTCCATCAAAGATCCTTTCCCTAGCTCTGTCTGCCTGTTTTTG
JMFN013D07+ CACTAAAAATTTTCAATTTCCATCAAAGATCCTTTCCCTAGCTCTGTCTGCCTGTTTTTG
rJMFF023H18- CACTAAAAATTTTCAATTTCCATCAAAGATCCTTTCCCTAGCTCTGTCTGCCTGTTTTTG
rJMFF014D04- CACTAAAAATTTTCAATTTCCATCAAAGATCCTTTCCCTAGCTCTGTCTGCCTGTTTTTG
____________________________________________________________
consensus CACTAAAAATTTTCAATTTCCATCAAAGATCCTTTCCCTAGCTCTGTCTGCCTGTTTTTG
. : . : . : . : . : . :
JMFN036L17+ CCAATCAGTGAACAAAGTTATGATTATAAGCAGTATGGATTGCACTGCAGCTCCTATATT
JMFN013D07+ CCAATCAGTGAACAAAGTTATGATTATAAGCAGTATGGATTGCACTGCAGCTCCTATATT
rJMFF023H18- CCAATCAGTGAACAAAGTTATGATTATAAGCAGTATGGATTGCACTGCAGCTCCTATATT
rJMFF014D04- CCAATCAGTGAACAAAGTTATGATTATAAGCAGTATGGATTGCACTGCAGCTCCTATATT
____________________________________________________________
consensus CCAATCAGTGAACAAAGTTATGATTATAAGCAGTATGGATTGCACTGCAGCTCCTATATT
. : . : . : . : . : . :
JMFN036L17+ TAGTCCAATCCAGAGCCCCTTCCCATTCAAGTGAGCAGCAAAGCCCAGGATCGATGCCAC
JMFN013D07+ TAGTCCAATCCAGAGCCCCTTCCCATTCAAGTGAGCAGCAAAGCCCAGGATCGATGCCAC
rJMFF023H18- TAGTCCAATCCAGAGCCCCTTCCCATTCAAGTGAGCAGCAAAGCCCAGGATCGATGCCAC
rJMFF014D04- TAGTCCAATCCAGAGCCCCTTCCCATTCAAGTGAGCAGCAAAGCCCAGGATCGATGCCAC
____________________________________________________________
consensus TAGTCCAATCCAGAGCCCCTTCCCATTCAAGTGAGCAGCAAAGCCCAGGATCGATGCCAC
. : . : . : . : . : . :
JMFN036L17+ TGGCAATCCCACCAAATAGAATGATCCCAGATTGATGTATGCTCCAGAATGCTGCTTCCC
JMFN013D07+ TGGCAATCCCACCAAATAGAATGATCCCAGATTGATGTATGCTCCAGAATGCTGCTTCCC
rJMFF023H18- TGGCAATCCCACCAAATAGAATGATCCCAGATTGATGTATGCTCCAGAATGCTGCTTCCC
rJMFF014D04- TGGCAATCCCACCAAATAGAATGATCCCAGATTGATGTATGCTCCAGAATGCTGNTTCCC
____________________________________________________________
consensus TGGCAATCCCACCAAATAGAATGATCCCAGATTGATGTATGCTCCAGAATGCTGCTTCCC
. : . : . : . : . : . :
JMFN036L17+ ATTTCCTCTCACAACTCCAGAGAGTACTGAATGGATGCAATCTGTCACAACCAACAGACA
JMFN013D07+ ATTTCCTCTCACAACTCCAGAGAGTACTGACTGGATGCAATCTGTCACAACCAACAGACA
rJMFF023H18- ATTTCCTCTCACAACTCCAGAGAGTACTGACTGGATGCAATCTGTCACAACCAACAGACA
rJMFF014D04- ATTTCCTCTCACAACTCCAGAGAGTACTGACTGGATGCAATCTGTCACAACCAACAGACA
____________________________________________________________
consensus ATTTCCTCTCACAACTCCAGAGAGTACTGACTGGATGCAATCTGTCACAACCAACAGACA
. : . : . : . : . : . :
JMFN036L17+ GACAAAAGGAACCATTTTTCCTATGTAATCCACAACTTCCTTCTCGTTGCTGAACAAGAA
JMFN013D07+ GACAAAAGGAACCATTTTTCCTATGTAATCCACAACTTCCTTCTCGTTGCTGAACAAGAA
rJMFF023H18- GACAAAAGGAACCATTTTTCCTATGTAATCCACAACTTCCTTCTCGTTGCTGAACAAGAA
rJMFF014D04- GACAAAAGGAACCATTTTTCCTATGTAATCCACAACTTCCTTCTCGTTGCTGAACAAGAA
____________________________________________________________
consensus GACAAAAGGAACCATTTTTCCTATGTAATCCACAACTTCCTTCTCGTTGCTGAACAAGAA
. : . : . : . : . : . :
JMFN036L17+ TCCCAGAACACGTCCGGAGCAAAGAAGAGCTGTGATCGCGATTACTGCCTCTGAGAGCGA
JMFN013D07+ TCCCAGAACACGTCCGGAGCAAAGAAGAGCTGTGATCGCGATTACTGCCTCTGAGAGCGA
rJMFF023H18- TCCCAGAACACGTCCGGAGCAAAGAAGAGCTGTGATCGCGATTACTGCCTCTGAGAGCGA
rJMFF014D04- TCCCAGAACACGTCCGGAGCAAAGAAGAGCTGTGATCGCGATTACTGCCTCTGAGAGCGA
____________________________________________________________
consensus TCCCAGAACACGTCCGGAGCAAAGAAGAGCTGTGATCGCGATTACTGCCTCTGAGAGCGA
. : . : . : . : . : . :
JMFN036L17+ GAGAACAAGTACTGCCGTAACAACATTTCGTGCTGCCTCTGAGTTTCCTGCTCCGAGTTC
JMFN013D07+ GAGAACAAGTACTGCCGTAACAACATTTCGTGCTGCCTCTGAGTTTCCTGCTCCGAGTTC
rJMFF023H18- GAGAACAAGTACTGCCGTAACAACATTTCGTGCTGCCTCTGAGTTTCCTGCTCCGAGTTC
rJMFF014D04- GAGAACAAGTACTGCCGTAACAACATTTCGTGCTGCCTCTGAGTTTCCTGCTCCGAGTTC
____________________________________________________________
consensus GAGAACAAGTACTGCCGTAACAACATTTCGTGCTGCCTCTGAGTTTCCTGCTCCGAGTTC
. : . : . : . : . : . :
JMFN036L17+ ATTTGAGATTCGAGTGC
JMFN013D07+ ATTTGAGATTCGAGTGCTTGCGCCAGCACCAATGGAAAGCGGTATGAAGAAGTGCAATGA
rJMFF023H18- ATTTGAGATTCGAGTGCTTGCGCCAGCACCAATGGAAAGCGGTATGAAGAAGTGCAATGA
rJMFF014D04- ATTTGAGATTCGAGTGCTTGCGCCAGCACCAATGGAAAGCGGTATGAAGAAGTGCAATGA
____________________________________________________________
consensus ATTTGAGATTCGAGTGCTTGCGCCAGCACCAATGGAAAGCGGTATGAAGAAGTGCAATGA
. : . : . : . : . : . :
JMFN013D07+ A
rJMFF023H18- AGAAATCATTAGGCATATTGAGAGAACTGAAGCCTCGAGTTGGGGAT
rJMFF014D04- AGAAATCATTAGGCATATTGAGAGAACTGAAGCCTCGAGTTGGGGATTAGGCAAGAGTCC
____________________________________________________________
consensus AGAAATCATTAGGCATATTGAGAGAACTGAAGCCTCGAGTTGGGGATTAGGCAAGAGTCC
. : . : . : . : . : . :
rJMFF014D04- AGATAGCAATACAACTATTTCATACGTCCACCATTCAAGACAAATCATGCATGCTGAAGG
____________________________________________________________
consensus AGATAGCAATACAACTATTTCATACGTCCACCATTCAAGACAAATCATGCATGCTGAAGG