| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012G13 | Sequence | 510 | 012256 (6) | ref|XP_009763640.1| | 2e-99 | PREDICTED: N-carbamoylputrescine amidase [Nicotiana sylvestris] | 720 | 012256 (6) | gb|KDO58121.1| | 7e-99 | hypothetical protein CISIN_1g022174mg [Citrus sinensis] |
| JMFF030H01 | Sequence | 444 | 012256 (6) | ref|XP_009763640.1| | 7e-77 | PREDICTED: N-carbamoylputrescine amidase [Nicotiana sylvestris] | 736 | 012256 (6) | gb|KDO58121.1| | 9e-118 | hypothetical protein CISIN_1g022174mg [Citrus sinensis] |
| JMFF046O02 | Sequence | 600 | 012256 (6) | ref|XP_009763640.1| | 3e-106 | PREDICTED: N-carbamoylputrescine amidase [Nicotiana sylvestris] | 548 | 012256 (6) | gb|KDO58121.1| | 3e-70 | hypothetical protein CISIN_1g022174mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMFF030H01- GACTCTGCTTTGATTTCAT
JMFF046O02- ATTGACTCTGCTTTGATTTCAT
____________________________________________________________
consensus ATTGACTCTGCTTTGATTTCAT
. : . : . : . : . : . :
JMFF012G13- GGTTAACGCAAGAGATTTAAGCACAAGGAGTTTAGCGGCGGAGAATGGCGGAGATC
JMFF030H01- TGTTGGTTAACGCAAGAGATTTAAGCACAAGGAGTTTAGCGGCGGAGAATGGCGGAGATC
JMFF046O02- TGTTGGTTAACGCAAGAGATTTAAGCACAAGGAGTTTAGCGGCGGAGAATGGCGGAGATC
____________________________________________________________
consensus TGTTGGTTAACGCAAGAGATTTAAGCACAAGGAGTTTAGCGGCGGAGAATGGCGGAGATC
. : . : . : . : . : . :
JMFF012G13- AAGAGACTAGTCACCGTCGCAGCTCTGCAATTCGCCTGCACGGATGATGTCGCCACCAAC
JMFF030H01- AAGAGACTAGTCACCGTCGCAGCTCTGCAATTCGCCTGCACGGATGATGTCGCCACCAAC
JMFF046O02- AAGAGACTAGTCACCGTCGCAGCTCTGCAATTCGCCTGCACGGATGATGTCGCCACACAC
____________________________________________________________
consensus AAGAGACTAGTCACCGTCGCAGCTCTGCAATTCGCCTGCACGGATGATGTCGCCACCAAC
. : . : . : . : . : . :
JMFF012G13- GTCGCCACCGCCGAGAGGTTGGTTAGAGAAGCTCATGAGAAGGGGGCGAATATCATTCTT
JMFF030H01- GTCGCCACCGCCGAGAGGTTGGTTAGAGAAGCTCATGAGAAGGGGGCGAATATCATTCTT
JMFF046O02- GTCGCCACCGCCGAGAGGTTGGTTAGAGAAGCTCATGAGAAGGGGGCGAATATCATTCTT
____________________________________________________________
consensus GTCGCCACCGCCGAGAGGTTGGTTAGAGAAGCTCATGAGAAGGGGGCGAATATCATTCTT
. : . : . : . : . : . :
JMFF012G13- ATACAGGAGTTGTTTGAGGGTTATTACTTTTGTCAAGCACAAAGAGAAGACTACTTTCAA
JMFF030H01- ATACAGGAGTTGTTTGAGGGTTATTACTTTTGTCAAGCACAAAGAGAAGACTACTTTCAA
JMFF046O02- ATACAGGAGTTGTTTGAGGGTTATTACTTTTGTCAAGCACAAAGAGAAGACTACTTTCAA
____________________________________________________________
consensus ATACAGGAGTTGTTTGAGGGTTATTACTTTTGTCAAGCACAAAGAGAAGACTACTTTCAA
. : . : . : . : . : . :
JMFF012G13- AGAGCAAAACCATACAAGGGACATCCAACAATACTAAGGATGCAGGAGCTTGCAAAAGAT
JMFF030H01- AGAGCAAAACCATACAAGGGACATCCAACAATACTAAGGATGCAGGAGCTTGCAAAAGAT
JMFF046O02- AGAGCAAAACCATACAAGGGACATCCAACAATACTAAGGATGCAGGAGCTTGCAAAAGAT
____________________________________________________________
consensus AGAGCAAAACCATACAAGGGACATCCAACAATACTAAGGATGCAGGAGCTTGCAAAAGAT
. : . : . : . : . : . :
JMFF012G13- TTGGGAGTTGTAATTCCAGTTAGCTTCTTTGAGGAGGCAAATAATGCCCATTACAATTCA
JMFF030H01- TTGGGAGTTGTAATTCCAGTTAGCTTCTTTGAGGAGGCAAATAATGCCCATTACAATTCA
JMFF046O02- TTGGGAGTTGTAATTCCAGTTAGCTTCTTTGAGGAGGCAAATAATGCCCATTACAATTCA
____________________________________________________________
consensus TTGGGAGTTGTAATTCCAGTTAGCTTCTTTGAGGAGGCAAATAATGCCCATTACAATTCA
. : . : . : . : . : . :
JMFF012G13- GTAGTTGTGATTGATGCTGATGGGACTGATCTTGGACTTTACAGAAAATCCCATATTCCT
JMFF030H01- GTANTTGTGATTGATGCTGATGGGACTGATCTTGGACTTTACAGAAAATCCCATATTCCT
JMFF046O02- GTAGTTGTGATTGATGCTGATGGGACTGATCTTGGACTTTACAGAANATCCCATATTCCT
rJMFF030H01+ ATCCCATATTCCT
____________________________________________________________
consensus GTAGTTGTGATTGATGCTGATGGGACTGATCTTGGACTTTACAGAAAATCCCATATTCCT
. : . : . : . : . : . :
JMFF012G13- GATGGTCCAGGTTACCAGGAAAAATTTTACTTTAATCCAGGTGACACTGGCTTTAAGGTC
JMFF030H01- GATGG
JMFF046O02- GATGGTCCAGGTTACCAGGAAAAATTTTACTTTAATCCAGGTGACACTGGCTTTAAGGTC
rJMFF030H01+ GATGGTCCAGGTTACCAGGAAAAATTTTACTTTAATCCAGGTGACACTGGCTTTAAGGTC
____________________________________________________________
consensus GATGGTCCAGGTTACCAGGAAAAATTTTACTTTAATCCAGGTGACACTGGCTTTAAGGTC
. : . : . : . : . : . :
JMFF012G13- TTCGAGACGAAATTTGCAAAAATTGGAGTGGGTA
JMFF046O02- TTCGAGACGAAATTTGCAAAAATTGGAGTGGGTATTTGCTGGGATCAATGGTTCCCCGA-
rJMFF030H01+ TTCGAGACGAAATTTGCAAAAATTGGAGTGGGTATTTGCTGGGATCAATGGTTCCCCGAG
rJMFF012G13+ TTCGAGACGAAATTTGCAAAAATTGGAGTGGGTATTTGCTGGGATCAATGGTTCCCCGAG
____________________________________________________________
consensus TTCGAGACGAAATTTGCAAAAATTGGAGTGGGTATTTGCTGGGATCAATGGTTCCCCGAG
. : . : . : . : . : . :
JMFF046O02- GCAGCTCGAGCTATGGCTCTTCAGGGTGCAGAAATACTG
rJMFF030H01+ GCAGCTCGAGCTATGGCTCTTCAGGGTGCAGAAATACTGTTGTACCCAACTGCAATTGGT
rJMFF046O02+ TGGT
rJMFF012G13+ GCAGCTCGAGCTATGGCTCTTCAGGGTGCAGAAATACTGTTGTACCCAACTGCAATTGGT
____________________________________________________________
consensus GCAGCTCGAGCTATGGCTCTTCAGGGTGCAGAAATACTGTTGTACCCAACTGCAATTGGT
. : . : . : . : . : . :
rJMFF030H01+ TCTGAACCTCAAGATGACGGACTTGATTCCCGAGAGCATTGGAAGCGAGTGATGCAAGGT
rJMFF046O02+ TCTGAACCTCAAGATGACGGACTTGATTCCCGAGAGCATTGGAAGCGAGTGATGCAAGGT
rJMFF012G13+ TCTGAACCTCAAGATGACGGACTTGATTCCCGAGAGCATTGGAAGCGAGTGATGCAAGGT
____________________________________________________________
consensus TCTGAACCTCAAGATGACGGACTTGATTCCCGAGAGCATTGGAAGCGAGTGATGCAAGGT
. : . : . : . : . : . :
rJMFF030H01+ CATGCTGGGTCTAACGTAGTACCTCTAGTAGCTTCAAACCGCATTGGGAAGGAGATAATT
rJMFF046O02+ CATGCTGGGGCTAACGTAGTACCTCTAGTAGCTTCAAACCGCATTGGGAAGGAGATAATT
rJMFF012G13+ CATGCTGGGGCTAACGTAGTACCTCTAGTAGCTTCAAACCGCATTGGGAAGGAGATAATT
____________________________________________________________
consensus CATGCTGGGGCTAACGTAGTACCTCTAGTAGCTTCAAACCGCATTGGGAAGGAGATAATT
. : . : . : . : . : . :
rJMFF030H01+ GAGACAGAGCATGGGAAGAGTGAGATAACATTCTATGGCAATTCCTTCATAGCAGGTCCC
rJMFF046O02+ GAGACAGAGCATGGGAAGAGTGAGATAACATTCTATGGCAATTCCTTCATAGCAGGTCCC
rJMFF012G13+ GAGACAGAGCATGGGAAGAGTGAGATAACATTCTATGGCAATTCCTTCATAGCAGGTCCC
____________________________________________________________
consensus GAGACAGAGCATGGGAAGAGTGAGATAACATTCTATGGCAATTCCTTCATAGCAGGTCCC
. : . : . : . : . : . :
rJMFF030H01+ ACAGGAGAAATTGTGGCACTCGCAGATGATAAGCAGGAAGCTGTTCTTGTAGCACAGTTT
rJMFF046O02+ ACAGGAGAAATTGTGGCACTCGCAGATGATAAGCAGGAAGCTGTTCTTGTAGCACAGTTT
rJMFF012G13+ ACAGGAGAAATTGTGGCACTCGCAGATGATAAGCAGGAAGCTGTTCTTGTAGCACAGTTT
____________________________________________________________
consensus ACAGGAGAAATTGTGGCACTCGCAGATGATAAGCAGGAAGCTGTTCTTGTAGCACAGTTT
. : . : . : . : . : . :
rJMFF030H01+ GATCTTGCCAATATCAAAAGCAAAAGACGTAGTTGGGGGGTGTTTCGTGATCGGCGCCCG
rJMFF046O02+ GATCTTGCCAATATCAAAAGCAAAAGACGTAGTTGGGGGGTGTTTCGTGATCGGCGCCCG
rJMFF012G13+ GATCTTGCCAATATCAAAAGCAAAAGACGTAGTTGGGGGGTGTTTCGTGATCGGCGCCCG
____________________________________________________________
consensus GATCTTGCCAATATCAAAAGCAAAAGACGTAGTTGGGGGGTGTTTCGTGATCGGCGCCCG
. : . : . : . : . : . :
rJMFF030H01+ GAGTTGAATAAGGTGCTTTTGACATTAGATGGCCACAATCCATCTCTCTGAACTGAATTC
rJMFF046O02+ GAGTTGTATAAGGTGCTTTTGACATTAGATGGCCACAATCCATCTCTCTGAACTGAATTC
rJMFF012G13+ GAGTTGTATAAGGTGCTTTTGACATTAGATGGCCACAATCCATCTCTCTGAACTGAATTC
____________________________________________________________
consensus GAGTTGTATAAGGTGCTTTTGACATTAGATGGCCACAATCCATCTCTCTGAACTGAATTC
. : . : . : . : . : . :
rJMFF030H01+ CTCAGTTAGTTTCTGGTTTGAGAGAGATGGTTGTAAGGAACTTTTAGAACCTCAAAATTT
rJMFF046O02+ CTCAGTTAGTTTCTGGTTTGAGAGAGATGGTTGTAAGGAACTTTTAGAACCTCAAAATTT
rJMFF012G13+ CTCAGTTAGTTTCTGGTTTGAGAGAGATGGTTGTAAGGAACTTTTAGAACCTCAAAATTT
____________________________________________________________
consensus CTCAGTTAGTTTCTGGTTTGAGAGAGATGGTTGTAAGGAACTTTTAGAACCTCAAAATTT
. : . : . : . : . : . :
rJMFF030H01+ CATCTATACCATTTGAATAAGTAGATGGTTTAGCTCTAAGGTGCTATGTCCCTAGAAGAA
rJMFF046O02+ CATCTATACCATTTGAATAAGTAGATGGTTTAGCTCTAAGGTGCTATGTCCCTAGAAGAA
rJMFF012G13+ CATCTATACCATTTGAATAAGTAGATGGTTTAGCTCTAAGGTGCTATGTCCCTAGAAGAA
____________________________________________________________
consensus CATCTATACCATTTGAATAAGTAGATGGTTTAGCTCTAAGGTGCTATGTCCCTAGAAGAA
. : . : . : . : . : . :
rJMFF030H01+ ACCGAGAAGAGATGTTTTGTTGTGGTCAATCACATTCAAGTATCTTCATATTATGATATC
rJMFF046O02+ ACCGAGAAGAGATGTTTTGTTGTGG
rJMFF012G13+ ACCGAGAAGAGATGTTTTGTTGTGGTCAATCACATTCAAGTATCTTCATATTATGATATC
____________________________________________________________
consensus ACCGAGAAGAGATGTTTTGTTGTGGTCAATCACATTCAAGTATCTTCATATTATGATATC
. : . : . : . : . : . :
rJMFF030H01+ AA
rJMFF012G13+ AATACCAACATTTAGCTTCCAAATTTCATCTTCAACCGTTGTTTACATCTAAAAGTAAAG
____________________________________________________________
consensus AATACCAACATTTAGCTTCCAAATTTCATCTTCAACCGTTGTTTACATCTAAAAGTAAAG