Contig 012252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G15Sequence529001691 (6)735012252 (6)emb|CDP08361.1|4e-30unnamed protein product [Coffea canephora]
JMFF019P24Sequence539001691 (6)736012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF020J08Sequence520001691 (6)751012252 (6)emb|CDP08361.1|7e-33unnamed protein product [Coffea canephora]
JMFF025A03Sequence544001691 (6)750012252 (6)emb|CDP08361.1|8e-34unnamed protein product [Coffea canephora]
JMFF025K04Sequence549001691 (6)737012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF032A07Sequence501001691 (6)652012252 (6)emb|CDP08361.1|1e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF020J08+ ACNTATTAATGAAGTTGAGAAGACTGTTGATA
rJMFF025K04+ TAATGAAGTTGAGAAGACTGTTGATA
rJMFF019P24+ TAATGAAGTTGAGAAGACTGTTGATA
rJMFF025A03+ TAATGAAGTTGAGAAGACTGTTGATA
rJMFF011G15+ AGAAGACTGTTGATA
                      ____________________________________________________________
consensus ACNTATTAATGAAGTTGAGAAGACTGTTGATA
 
. : . : . : . : . : . :
rJMFF020J08+ CTGAGAAACAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
rJMFF025K04+ CTGAGAAACAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
rJMFF019P24+ CTGAGAAACAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
rJMFF025A03+ CTGAGAAACAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
rJMFF011G15+ CTGAGAANCAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
                      ____________________________________________________________
consensus CTGAGAAACAAACTAGCCAGGAAGATACTGGAGATGCCACCAAGGATTCTCCACCAAATG
 
. : . : . : . : . : . :
rJMFF020J08+ AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
rJMFF025K04+ AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
rJMFF019P24+ AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
rJMFF032A07+ AGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
rJMFF025A03+ AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
rJMFF011G15+ AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
                      ____________________________________________________________
consensus AGACCGAAGAAAAGGAGCCCGAGGAGAAGGAGATGACTTTGGAGGAATATGAGAAGGTAC
 
. : . : . : . : . : . :
rJMFF020J08+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
rJMFF025K04+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
rJMFF019P24+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
rJMFF032A07+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
rJMFF025A03+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
rJMFF011G15+ TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
                      ____________________________________________________________
consensus TGGAGGAGAAGAGGAAGGCGTTGCTTGCATCAAAGCCCGAGGAGAGAAAAGTGTGTTTGG
 
. : . : . : . : . : . :
rJMFF020J08+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
rJMFF025K04+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
rJMFF019P24+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
rJMFF032A07+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
rJMFF025A03+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
rJMFF011G15+ ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
                      ____________________________________________________________
consensus ATAAGGAGTTTGCGTCGATGCAGTTGCTTTCCAACAAGAAGAATGATGAGGAAGTCTTCA
 
. : . : . : . : . : . :
rJMFF020J08+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
rJMFF025K04+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
rJMFF019P24+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
rJMFF032A07+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
rJMFF025A03+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
rJMFF011G15+ TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
                      ____________________________________________________________
consensus TTAAACTGGGATCTGAGAAAGAAAAAAAGAAAGAGGCTGGAGAAAAGGTTAAAAAGACGA
 
. : . : . : . : . : . :
rJMFF020J08+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
rJMFF025K04+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
rJMFF019P24+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
rJMFF032A07+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
rJMFF025A03+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
rJMFF011G15+ AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
                      ____________________________________________________________
consensus AAAACATCAACGAGTTTTTGAAACCAGCTGAAGGAGAAAACTACTATCGCTCTGGTGGAC
 
. : . : . : . : . : . :
rJMFF020J08+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
rJMFF025K04+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
rJMFF019P24+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
rJMFF032A07+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
rJMFF025A03+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
rJMFF011G15+ GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
                      ____________________________________________________________
consensus GTGGGAGGGGCCGTGGGCGTGGCCGAGGAGGATACGGTGGAAGCCTGTCCAGTGTTGACG
 
. : . : . : . : . : . :
rJMFF020J08+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
rJMFF025K04+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
rJMFF019P24+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
rJMFF032A07+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
rJMFF025A03+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
rJMFF011G15+ CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
                      ____________________________________________________________
consensus CTCCATCTATTGAGGATGTCGGGCAGTTCCCTACCTTGGGTAAAAAGTGAGTGATGAACG
 
. : . : . : . : . : . :
rJMFF020J08+ ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
rJMFF025K04+ ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
rJMFF019P24+ ACGCGACGCTTTTCCATCGGCACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
rJMFF032A07+ ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
rJMFF025A03+ ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
rJMFF011G15+ ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
                      ____________________________________________________________
consensus ACGCGACGCTTTTCCATCGACACCTTATGACTGTGACTTGTGATTGTTTCGACTTAGAAA
 
. : . : . : . : . : . :
rJMFF020J08+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
rJMFF025K04+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
rJMFF019P24+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
rJMFF032A07+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
rJMFF025A03+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
rJMFF011G15+ CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
                      ____________________________________________________________
consensus CCCGCTGGACCTGGTTGTTTCTTTACTACAATTATCTTTTTAAACTTGTTTTTTAAATAG
 
. : . : . : . : . : . :
rJMFF020J08+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
rJMFF025K04+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
rJMFF019P24+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
rJMFF032A07+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
rJMFF025A03+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
rJMFF011G15+ TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
                      ____________________________________________________________
consensus TGTACATTTAGTTGTTACCGTCCGAGGGTTATATCTTTAACTTTCTTGGTTACAGTCTCT
 
. : . : . : . : . : . :
rJMFF020J08+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGGATCTTGAC
rJMFF025K04+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGG
rJMFF019P24+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGG
rJMFF032A07+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGGATCTTGAC
rJMFF025A03+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGGATCTTGAC
rJMFF011G15+ ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGGATCTTGACT
                      ____________________________________________________________
consensus ACTTTTAGAATTTAGGTACTCTTTTTACTACATCTTTGATTTCTTTCTGGGATCTTGACT