Contig 012240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007J20Sequence478003096 (7)ref|XP_011077976.1|1e-24PREDICTED: beta-galactosidase-like [Sesamum indicum]669012240 (3)ref|XP_009762312.1|6e-56PREDICTED: beta-galactosidase-like [Nicotiana sylvestris]
JMFF009L21Sequence479003096 (7)ref|XP_011077976.1|6e-27PREDICTED: beta-galactosidase-like [Sesamum indicum]736012240 (3)ref|XP_010313633.1|1e-78PREDICTED: ss-galactosidase isoform X1 [Solanum lycopersicum]
JMFS112G05Sequence627012240 (3)ref|XP_009762312.1|7e-68PREDICTED: beta-galactosidase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF009L21+                                                   GAAGGGACAAGAAACTTGG
                      ____________________________________________________________
consensus                                                      GAAGGGACAAGAAACTTGG
 
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rJMFF009L21+          CTAAGCAGAGATGGTCTTACAAGGTTGGGTTGAAAGGCGAATCCTTAAGTCTCAATACTA
rJMFF007J20+                                                           TCTCAATACTA
                      ____________________________________________________________
consensus             CTAAGCAGAGATGGTCTTACAAGGTTGGGTTGAAAGGCGAATCCTTAAGTCTCAATACTA
 
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JMFS112G05-                         TCGGTGGAATGGGTACAAGGTTCCCTTCTGGCTAACAAACAGCCCC
rJMFF009L21+          TGAGTGGAAGTTCCTCGGTGGAATGGGTACAAGGTTCCCTTCTGGCTAACAAACAGCCCC
rJMFF007J20+          TGAGTGGAAGTTCCTCGGTGGAATGGGTACAAGGTTCCCTTNTGGCTAACAAACAGCCCC
                      ____________________________________________________________
consensus             TGAGTGGAAGTTCCTCGGTGGAATGGGTACAAGGTTCCCTTCTGGCTAACAAACAGCCCC
 
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JMFS112G05-           TAACCTGGTACAAGGCAATTTTTAACGCACCGGGAGGAAACGACCCGGTGGCGCTGGACA
rJMFF009L21+          TAACCTGGTACAAGGCAATTTTTAACGCACCGGGAGGAAACGACCCGGTGGCGCTGGACA
rJMFF007J20+          TAACCTGGTACAAGGCAATTTTTAACGCACCGGGA--AAACGACCCGGTGGCGCTGGACA
                      ____________________________________________________________
consensus             TAACCTGGTACAAGGCAATTTTTAACGCACCGGGAGGAAACGACCCGGTGGCGCTGGACA
 
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JMFS112G05-           TGAGCAGCATGGGAAAAGGCGAGATATGGATAAACGGGGAAGGCGTCGGGCGCCACTGGC
rJMFF009L21+          TGAGCAGCATGGGAAAAGGCGAGATATGGATAAACGGGGAAGGCGTCGGGCGCCACTGGC
rJMFF007J20+          TGAGCAGCATGGGAAAAGGCGAGATATGGATAAACGGGGAAGGCGTCGGGCGCCACTGGC
                      ____________________________________________________________
consensus             TGAGCAGCATGGGAAAAGGCGAGATATGGATAAACGGGGAAGGCGTCGGGCGCCACTGGC
 
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JMFS112G05-           CTGCATACACTGCCCATGGTAGCTGTGGTCAGTGCAGCTATGCTGGAACTTATAGTGAGA
rJMFF009L21+          CTGCATACACTGCCCATGGTAGCTGTGGTCAGTGCAGCTATGCTGGAACTTATAGTGAGA
rJMFF007J20+          CTGCATACACTGCCCATGGTAGCTGTGGTCAGTGCAGCTATGCTGGAACTTATAGTGAGA
                      ____________________________________________________________
consensus             CTGCATACACTGCCCATGGTAGCTGTGGTCAGTGCAGCTATGCTGGAACTTATAGTGAGA
 
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JMFS112G05-           CCAAATGCCAGACAAATTGTGGGCAGCCTTCTCAAAGATGGTATCATGTCCCGCGATCAT
rJMFF009L21+          CCAAATGCCAGACAAATTGTGGGCAGCCTTCTCAAAGATGGTATCATGTCCCGCGATCAT
rJMFF007J20+          CCAAATGCCAGACAAATTGTGGGCAGCCTTCTCAAAGATGGTATCATGTCCCGCGATCAT
                      ____________________________________________________________
consensus             CCAAATGCCAGACAAATTGTGGGCAGCCTTCTCAAAGATGGTATCATGTCCCGCGATCAT
 
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JMFS112G05-           GGCTGAAACCATCTGGGAATCTCTTAGTTGTGTTTGAAGAATGGGGGGGCGACCCGACTG
rJMFF009L21+          GGCTGAAACCATCTGGGAATCTCTTAGTTGTGTTTGAAGAATGGGGGGGCGACCCGACTG
rJMFF007J20+          GGCTGAAACCATCTGGGAATCTCTTAGTTGTGTTTGAAGAATGGGGGGGCGACCCGACTG
                      ____________________________________________________________
consensus             GGCTGAAACCATCTGGGAATCTCTTAGTTGTGTTTGAAGAATGGGGGGGCGACCCGACTG
 
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JMFS112G05-           GGATTAAATTCGTTACAAGAACCAAGTAATAATTAGTGATCACAGATCAAGAAAGAAAGA
rJMFF009L21+          GGATTAAATTCGTTACAAGAACCAAGTAATAATTAGTGATCACAGATCAAGAAAGAAAGA
rJMFF007J20+          GGATTAAATTCGTTACAAGAACCAAGTAATAATTAGTGATCACAGATCAAGAAAGAAAGA
                      ____________________________________________________________
consensus             GGATTAAATTCGTTACAAGAACCAAGTAATAATTAGTGATCACAGATCAAGAAAGAAAGA
 
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JMFS112G05-           GCTTTCTGAAAATCTTTCTTCTCTGCAATGTTAGTTTGAAATAAGAAGATATGAAGCAGG
rJMFF009L21+          GCTTTCTGAAAATCTTTCTTCTCTGCAATGTTAGTTTGAAATAAGAAGATATGAAGCAGG
rJMFF007J20+          GCTTTCTGAAAATCTTTCTTCTCTGCAATGTTAGTTTGAAATAAGAAGATATGAAGCAGG
                      ____________________________________________________________
consensus             GCTTTCTGAAAATCTTTCTTCTCTGCAATGTTAGTTTGAAATAAGAAGATATGAAGCAGG
 
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JMFS112G05-           TTGGGATATACAACTATACAAGTATACAAGAAGCCATATACATAGCTAGAGATACAAGCA
rJMFF009L21+          TTGGGATATACAACTATACAAGTATACAAGAAGCCATATACATAGCTAGAGATACAAGCA
rJMFF007J20+          TTGGGATATACAACTATACAAGTATACAAGAAGCCATATACATAGCTAGAGATACAAGCA
                      ____________________________________________________________
consensus             TTGGGATATACAACTATACAAGTATACAAGAAGCCATATACATAGCTAGAGATACAAGCA
 
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JMFS112G05-           TTATGTGTATATATTATATACAAAGCTACAACTTGTGGCTTACACAAATTTGGTATCAAC
rJMFF009L21+          TTATGTGTATATATTATATACAAAGCTACAACTTGTGGCTTACACAAATTTGGTATCAAC
rJMFF007J20+          TTATGTGTATATATTATATACAAAGCTACAACTTGTGGCTTACACAAATTTGGTATCAAC
                      ____________________________________________________________
consensus             TTATGTGTATATATTATATACAAAGCTACAACTTGTGGCTTACACAAATTTGGTATCAAC
 
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JMFS112G05-           ANAATTGTTGAATATGTAGAGGAGATGATGAAAGAGATGTA                   
rJMFF009L21+          AAAATTGTTGAATATGTAGAGGAGATGATGAAAGAGATGTATAATTTTAGAGCAATA   
rJMFF007J20+          AAAATTGTTGAATATGTAGAGGAGATGATGAAAGAGATGTATAATTTTAGAGCAATAAAG
                      ____________________________________________________________
consensus             AAAATTGTTGAATATGTAGAGGAGATGATGAAAGAGATGTATAATTTTAGAGCAATAAAG