Contig 012239:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023C22-                                             GATTATACAGTCGGTCGTCGAAAAAA
                      ____________________________________________________________
consensus                                               GATTATACAGTCGGTCGTCGAAAAAA
 
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JMSF023C22-           GAAACACTATCGGAAGCAATGGCGAGCAGCACTGCGAATGGAGGTGGCGGCGGGGAAGAG
JMFF007C08-                   ATCGGAAGCAATGGCGAGCAGCACTGCGAATGGAGGTGGCGGCGGGGAAGAG
                      ____________________________________________________________
consensus             GAAACACTATCGGAAGCAATGGCGAGCAGCACTGCGAATGGAGGTGGCGGCGGGGAAGAG
 
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JMSF023C22-           GAAGCGAAGCAATTAGCTGCTGAGCTCTCCAAAACCCTAAAGGAAGGCGAGAGAATCCTC
JMFF007C08-           GAAGCGAAGCAATTAGCTGCTGAGCTCTCCAAAACCCTAAAGGAAGGCGAGAGAATCCTC
                      ____________________________________________________________
consensus             GAAGCGAAGCAATTAGCTGCTGAGCTCTCCAAAACCCTAAAGGAAGGCGAGAGAATCCTC
 
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JMSF023C22-           GCTCCGACCCGGAGGCCCGACGGCACGCTCCGCAAGCCCATCCGGATTAGGGCTGGATAT
JMFF007C08-           GCTCCGACCCGGAGGCCCGACGGCACGCTCCGCAAGCCCATCCGGATTAGGGCTGGATAT
                      ____________________________________________________________
consensus             GCTCCGACCCGGAGGCCCGACGGCACGCTCCGCAAGCCCATCCGGATTAGGGCTGGATAT
 
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JMSF023C22-           GTTCCCCAAGAGGAAGTCGCCATTTACCAATCCAAAGGCGCCCTCTGGAAAAAGGAAATG
JMFF007C08-           GTTCCCCAAGAGGAAGTCGCCATTTACCAATCCAAAGGCGCCCTCTGGAAAAAGGAAATG
rJMSF023C22+                                 TTACCAATCCAAAGGCGCCCTCTGGAAAAAGGAAATG
rJMFF007C08+                                                         GAAAAAGGAAATG
                      ____________________________________________________________
consensus             GTTCCCCAAGAGGAAGTCGCCATTTACCAATCCAAAGGCGCCCTCTGGAAAAAGGAAATG
 
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JMSF023C22-           GCGGCGTTGCAGGAGGAGGTGCCGCCCGGGTACGATCCTGTGATGGAGGCTCCAAAGGCT
JMFF007C08-           GCGGCGTTGCAGGAGGAGGTGCCGCCCGGGTACGATCCTGTGATGGAGGCTCCAAAGGCT
rJMSF023C22+          GCGGCGTTGCAGGAGGAGGTGCCGCCCGGGTACGATCCTGTGATGGAGGCTCCAAAGGCT
rJMFF007C08+          GCGGCGTTGCAGGAGGAGGTGCCGCCCGGGTACGATCCTGTGATGGAGGCTCCAAAGGCT
                      ____________________________________________________________
consensus             GCGGCGTTGCAGGAGGAGGTGCCGCCCGGGTACGATCCTGTGATGGAGGCTCCAAAGGCT
 
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JMSF023C22-           AAGTCGAAATCAGCGAAGAGGAATGAAAGGAAGAAAGAAAAGCGTCTGCAGGCTGCTCTT
JMFF007C08-           AAGTCGAAATCAGCGAAGAGGAATGAAAGGAAGAAAGAAAAGCGTCTGCAGGCTGCTCTT
rJMSF023C22+          AAGTCGAAATCAGCGAAGAGGAATGAAAGGAAGAAAGAAAAGCGTCTGCAGGCTGCTCTT
rJMFF007C08+          AAGTCGAAATCAGCGAAGAGGAATGAAAGGAAGAAAGAAAAGCGTCTGCAGGCTGCTCTT
                      ____________________________________________________________
consensus             AAGTCGAAATCAGCGAAGAGGAATGAAAGGAAGAAAGAAAAGCGTCTGCAGGCTGCTCTT
 
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JMSF023C22-           GAAAAGGAAAAGGATCTAGAAGATAATGGTATTTCATCTGCTGAAACTCAGAACCATGTA
JMFF007C08-           GAAAAGGAAAAGGATCTAGAAGATAATGGTATTTCATCTGCTGAAACTCAGAACCATGTA
rJMSF023C22+          GAAAAGGAAAAGGATCTAGAAGATAATGGTATTTCATCTGCTGAAACTCAGAACCATGTA
rJMFF007C08+          GAAAAGGAAAAGGATCTAGAAGATAATGGTATTTCATCTGCTGAAACTCAGAACCATGTA
                      ____________________________________________________________
consensus             GAAAAGGAAAAGGATCTAGAAGATAATGGTATTTCATCTGCTGAAACTCAGAACCATGTA
 
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JMSF023C22-           TCAGATCAAGTGGAATCTGTTGCGTCCCAGATAAATGAGCTTGCCATCTCTTCGAATCCT
JMFF007C08-           TCAGATCAAGTGGAATCTGTTGCGTCCCA--TAAATGAGCTTGCCATCTCTTCGAATCCT
rJMSF023C22+          TCAGATCAAGTGGAATCTGTTGCGTCCCAGATAAATGAGCTTGCCATCTCTTCGAATCCT
rJMFF007C08+          TCAGATCAAGTGGAATCTGTTGCGTCCCA--TAAATGAGCTTGCCATCTCTTCGAATCCT
                      ____________________________________________________________
consensus             TCAGATCAAGTGGAATCTGTTGCGTCCCAGATAAATGAGCTTGCCATCTCTTCGAATCCT
 
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JMSF023C22-           GTCAACCCTCCATCAAATTCAACTGAATCTTCAACAACAGGGGATCATCTTCAGGAAATT
JMFF007C08-           GTCAACCCTCCATCAAATTCAACTGAATCTTCAACAACAGGGGATCATCTTCAGGAAATT
rJMSF023C22+          GTCAACCCTCCATCAAATTCAACTGAATCTTCAACAACAGGGGATCATCTTCAGGAAATT
rJMFF007C08+          GTCAACCCTCCATCAAATTCAACTGAATCTTCAACAACAGGGGATCATCTTCAGGAAATT
                      ____________________________________________________________
consensus             GTCAACCCTCCATCAAATTCAACTGAATCTTCAACAACAGGGGATCATCTTCAGGAAATT
 
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JMSF023C22-           GATAAAAAAATCCGAGCACTCAAAA                                   
JMFF007C08-           GATAAAAAAATCCGAGCACTCAAAA                                   
rJMSF023C22+          GATAAAAAAATCCGAGCACTCAAAAAAAAAGATTCGGCTAACAGAGGCCCAGCAGCAGAA
rJMFF007C08+          GATAAAAAAATCCGAGCACTC-AAAAAAAAGATTCGGCTAACAGAGGCCCAGCAGCAGAA
                      ____________________________________________________________
consensus             GATAAAAAAATCCGAGCACTCAAAAAAAAAGATTCGGCTAACAGAGGCCCAGCAGCAGAA
 
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rJMSF023C22+          AACGGATATAAAGGATATGAAGCCGGAACAGTTAGAGAAGGTGGCTAAACTGGAAGGTTG
rJMFF007C08+          AACGGATATAAAGGATATGAAGCCGGAACAGTTAGAGAAGGTGGCTAAACTGGAAGGTTG
                      ____________________________________________________________
consensus             AACGGATATAAAGGATATGAAGCCGGAACAGTTAGAGAAGGTGGCTAAACTGGAAGGTTG
 
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rJMSF023C22+          GCACAATGAATTAAAGCTTTTGGAGGATAAAAAGGATGAACTTGCAGCTTTGGCAACCTG
rJMFF007C08+          GCACAATGAATTAAAGCTTTTGGAGGATAAAAAGGATGAACTTGCAGCTTTGGCAACCTG
                      ____________________________________________________________
consensus             GCACAATGAATTAAAGCTTTTGGAGGATAAAAAGGATGAACTTGCAGCTTTGGCAACCTG
 
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rJMSF023C22+          AACTGATCTTTGTGTTGTAGGGTGAAGGAGCGATACTATCTAGGGTTACCTCATGACGTG
rJMFF007C08+          AACTGATCTTTGTGTTGTAGGGTGAAGGAGCGATACTATCTAGGGTTACCTCATGACGTG
                      ____________________________________________________________
consensus             AACTGATCTTTGTGTTGTAGGGTGAAGGAGCGATACTATCTAGGGTTACCTCATGACGTG
 
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rJMSF023C22+          TGATTACTGCATTGATATGCCCAGATTTTGTTTTTTAGATGTGTGTGTACTTTAGGCATG
rJMFF007C08+          TGATTACTGCATTGATATGCCCAGATTTTGTTTTTTAGATGTGTGTGTACTTTAGGCATG
                      ____________________________________________________________
consensus             TGATTACTGCATTGATATGCCCAGATTTTGTTTTTTAGATGTGTGTGTACTTTAGGCATG
 
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rJMSF023C22+          CTACTTCTCTTGTTTAGCTAGCTTCTTCTCATGCATGTTTCCACCAACAGTAGGTTGAAT
rJMFF007C08+          CTACTTCTCTTGTTTAGCTAGCTTCTTCTCATGCATGTTTCCACCAACAGTAGGTTGAAT
                      ____________________________________________________________
consensus             CTACTTCTCTTGTTTAGCTAGCTTCTTCTCATGCATGTTTCCACCAACAGTAGGTTGAAT
 
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rJMSF023C22+          CAACTTACTAGTCTCTA                                           
rJMFF007C08+          CAACTTACTAGTCTCTATATTCACTACCAAATTCAAACACATTTCTTTTCTTGCTTCTGC
                      ____________________________________________________________
consensus             CAACTTACTAGTCTCTATATTCACTACCAAATTCAAACACATTTCTTTTCTTGCTTCTGC
 
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rJMFF007C08+          ATTGATCTCTTATGACTGTATGATTGCTTGGCTGTATTTTACCCAGCTTCTTGCTCAATC
                      ____________________________________________________________
consensus             ATTGATCTCTTATGACTGTATGATTGCTTGGCTGTATTTTACCCAGCTTCTTGCTCAATC