Contig 012232:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M10Sequence576001573 (2)emb|CAE46658.1|4e-128putative alpha4-fucosyltransferase [Ipomoea nil]725012232 (2)emb|CAE46658.1|5e-138putative alpha4-fucosyltransferase [Ipomoea nil]
JMFF005P14Sequence522001573 (2)emb|CAE46658.1|2e-113putative alpha4-fucosyltransferase [Ipomoea nil]728012232 (2)emb|CAE46658.1|5e-138putative alpha4-fucosyltransferase [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF004M10+ TATAAGAG
rJMFF005P14+ TATAAGAG
                      ____________________________________________________________
consensus TATAAGAG
 
. : . : . : . : . : . :
rJMFF004M10+ AAATGACACGCTCGTTTATTGGTCTTCATCCCGTTGTCTCCCCGAAAGAAATAAACTGGC
rJMFF005P14+ AAATGACACGCTCGTTTATTGGTCTTCATCCCGTTGTCTCCCCGAAAGAAATAAACTGGC
                      ____________________________________________________________
consensus AAATGACACGCTCGTTTATTGGTCTTCATCCCGTTGTCTCCCCGAAAGAAATAAACTGGC
 
. : . : . : . : . : . :
rJMFF004M10+ GAAACAACTACTCCGATTGCTTCCAACCCATTCGTTCGGCAAGTGCTTGAACAACGTAGG
rJMFF005P14+ GAAACAACTACTCCGATTGCTTCCAACCCATTCGTTCGGCAAGTGCTTGAACAACGTAGG
                      ____________________________________________________________
consensus GAAACAACTACTCCGATTGCTTCCAACCCATTCGTTCGGCAAGTGCTTGAACAACGTAGG
 
. : . : . : . : . : . :
rJMFF004M10+ CGGCCTTGATAACGCACTCACCCTTTATCCCGACTGCATCAAGGACCCTAACGAGGCGCC
rJMFF005P14+ CGGCCTTGATAACGCACTCACCCTTTATCCCGACTGCATCAAGGACCCTAACGAGGCGCC
                      ____________________________________________________________
consensus CGGCCTTGATAACGCACTCACCCTTTATCCCGACTGCATCAAGGACCCTAACGAGGCGCC
 
. : . : . : . : . : . :
rJMFF004M10+ CAAATGGTGGGACCACTTGCACTGTGCAATGTCCCATTACAAGTTCGTCCTCGCTATCGA
rJMFF005P14+ CAAATGGTGGGACCACTTGCACTGTGCAATGTCCCATTACAAGTTCGTCCTCGCTATCGA
                      ____________________________________________________________
consensus CAAATGGTGGGACCACTTGCACTGTGCAATGTCCCATTACAAGTTCGTCCTCGCTATCGA
 
. : . : . : . : . : . :
rJMFF004M10+ GAACACCATGACGGAGAGTTACGTAACCGAGAAGCTATTCTACGCCCTAGAATCCGGATC
rJMFF005P14+ GAACACCATGACGGAGAGTTACGTAACCGAGAAGCTATTCTACGCCCTAGAATCCGGATC
                      ____________________________________________________________
consensus GAACACCATGACGGAGAGTTACGTAACCGAGAAGCTATTCTACGCCCTAGAATCCGGATC
 
. : . : . : . : . : . :
rJMFF004M10+ TGTACCCATTTACTTTGGCGCCCCGAATGTCCAGGACTTCGTCCCTCCACATTCGATCAT
rJMFF005P14+ TGTACCCATTTACTTTGGCGCCCCGAATGTCCAGGACTTCGTCCCTCCACATTCGATCAT
                      ____________________________________________________________
consensus TGTACCCATTTACTTTGGCGCCCCGAATGTCCAGGACTTCGTCCCTCCACATTCGATCAT
 
. : . : . : . : . : . :
rJMFF004M10+ CGACGGGACAAAGTTCAAGTCTTTGGAGGAACTCGCTTCCTACGTTAAGGCGCTCGCCAA
rJMFF005P14+ CGACGGGACAAAGTTCAAGTCTTTGGAGGAACTCGCTTCCTACGTTAAGGCGCTCGCCAA
                      ____________________________________________________________
consensus CGACGGGACAAAGTTCAAGTCTTTGGAGGAACTCGCTTCCTACGTTAAGGCGCTCGCCAA
 
. : . : . : . : . : . :
rJMFF004M10+ CGATCCCGTGGCCTATGCAGAATACCACGCGTGGAGGAGATGTGGAGTGATGGGAAACTA
rJMFF005P14+ CGATCCCGTGGCCTATGCAGAATACCACGCGTGGAGGAGATGTGGAGTGATGGGAAACTA
                      ____________________________________________________________
consensus CGATCCCGTGGCCTATGCAGAATACCACGCGTGGAGGAGATGTGGAGTGATGGGAAACTA
 
. : . : . : . : . : . :
rJMFF004M10+ TCGAAAAACCCGAGCAGCTAGCTTGGATACTTTACCTTGTAGGCTTTGTGAAGCTGTTAG
rJMFF005P14+ TCGAAAAACCCGAGCAGCTAGCTTGGATACTTTACCTTGTAGGCTTTGTGAAGCTGTTAG
                      ____________________________________________________________
consensus TCGAAAAACCCGAGCAGCTAGCTTGGATACTTTACCTTGTAGGCTTTGTGAAGCTGTTAG
 
. : . : . : . : . : . :
rJMFF004M10+ CAAGAAAAATGGAAGAAATGCTGAAGCCTCTTGACAGCATAGTAAATGTCCTTGAATATT
rJMFF005P14+ CAAGAAAAATGGAAGAAATGCTGAAGCCTCTTGACAGCATAGTAAATGTCCTTGAATATT
                      ____________________________________________________________
consensus CAAGAAAAATGGAAGAAATGCTGAAGCCTCTTGACAGCATAGTAAATGTCCTTGAATATT
 
. : . : . : . : . : . :
rJMFF004M10+ AATTGCTGAGATGTCAAGATTTTGTTTCTTAATGCTCCCTTAGAGTAGTTTGGGTTGGGA
rJMFF005P14+ AATTGCTGAGATGTCAAGATTTTGTTTCTTAATGCTCCCTTAGAGTAGTTTGGGTTGGGA
                      ____________________________________________________________
consensus AATTGCTGAGATGTCAAGATTTTGTTTCTTAATGCTCCCTTAGAGTAGTTTGGGTTGGGA
 
. : . : . : . : . : . :
rJMFF004M10+ ATATACACAGGCAGTTTGCATGTAGAAATTGGAACAATAACACATCAATCATACAGG
rJMFF005P14+ ATATACACAGGCAGTTTGCATGTAGAAATTGGAACAATAACACATCAATCATACAGGATT
                      ____________________________________________________________
consensus ATATACACAGGCAGTTTGCATGTAGAAATTGGAACAATAACACATCAATCATACAGGATT