Contig 012228:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D09Sequence476011536 (3)ref|XP_009805042.1|5e-57PREDICTED: protein notum homolog [Nicotiana sylvestris]632012228 (3)gb|EYU35369.1|3e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]
JMFF006H13Sequence542011536 (3)ref|XP_009805042.1|1e-67PREDICTED: protein notum homolog [Nicotiana sylvestris]609012228 (3)gb|EYU35369.1|2e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]
JMFF020N13Sequence414011536 (3)ref|XP_009805042.1|2e-24PREDICTED: protein notum homolog [Nicotiana sylvestris]627012228 (3)gb|EYU35369.1|3e-87hypothetical protein MIMGU_mgv1a0197532mg, partial [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006H13+ CCTCGTGCTTCTTTCCTCAGAATTTGATCGCA
rJMFF020N13+ CTCGTGCTTCTTTCCTCAGAATTTGATCGCA
rJMFF005D09+ CTCGTGCTTCTTTCCTCAGAATTTGATCGCA
                      ____________________________________________________________
consensus CCTCGTGCTTCTTTCCTCAGAATTTGATCGCA
 
. : . : . : . : . : . :
rJMFF006H13+ AACATCAACACTCCGCTCTTCTTACTCAATGCTGCCTATGATTCGTGGCAGGTCCAAGCC
rJMFF020N13+ AACATCAACACTCCGCTCTTCTTACTCAATGCTGCCTATGATTCGTGGCAGGTCCAAGCC
rJMFF005D09+ AACATCAACACTCCGCTCTTCTTACTCAATGCTGCCTATGATTCGTGGCAGGTCCAAGCC
                      ____________________________________________________________
consensus AACATCAACACTCCGCTCTTCTTACTCAATGCTGCCTATGATTCGTGGCAGGTCCAAGCC
 
. : . : . : . : . : . :
rJMFF006H13+ AGCTTGGCTCCTCCTTCAGCTGACCCGAATGGGGCTTGGCATGACTGCAAAGCGGACCAT
rJMFF020N13+ AGCTTGGCTCCTCCTTCAGCTGACCCGAATGGGGCTTGGCATGACTGCAAAGCGGACCAT
rJMFF005D09+ AGCTTGGCTCCTCCTTCAGCTGACCCGAATGGGGCTTGGCATGACTGCAAAGCGGACCAT
                      ____________________________________________________________
consensus AGCTTGGCTCCTCCTTCAGCTGACCCGAATGGGGCTTGGCATGACTGCAAAGCGGACCAT
 
. : . : . : . : . : . :
rJMFF006H13+ CAGAAATGCTCGACGTCACAGATTAAATTTCTGCAAGGATTTAGGAATGATATGCTGGAC
rJMFF020N13+ CAGAAATGCTCGACGTCACAGATTAAATTTCTGCAAGGATTTAGGAATGATATGCTGGAC
rJMFF005D09+ CAGAAATGCTCGACGTCACAGATTAAATTTCTGCAAGGATTTAGGAATGATATGCTGGAC
                      ____________________________________________________________
consensus CAGAAATGCTCGACGTCACAGATTAAATTTCTGCAAGGATTTAGGAATGATATGCTGGAC
 
. : . : . : . : . : . :
rJMFF006H13+ GCTGTAAAGGGGTTCGCAGCTTCTAAACAGACGGGCTTGTTCATAAATTCATGCTTCGCC
rJMFF020N13+ GCTGTAAAGGGGTTCGCAGCTTCTAAACAGACGGGCTTGTTCATAAATTCATGCTTCGCC
rJMFF005D09+ GCTGTAAAGGGGTTCGCAGCTTCTAAACAGACGGGCTTGTTCATAAATTCATGCTTCGCC
                      ____________________________________________________________
consensus GCTGTAAAGGGGTTCGCAGCTTCTAAACAGACGGGCTTGTTCATAAATTCATGCTTCGCC
 
. : . : . : . : . : . :
rJMFF006H13+ CACTGCCAGTCCGAGAGGCAGGATACATGGTTCGCTGACGATTCTCCTGTTATCAATAAC
rJMFF020N13+ CACTGCCAGTCCGAGAGGCAGGATACATGGTTCGCTGACGATTCTCCTGTTATCAATAAC
rJMFF005D09+ CACTGCCAGTCCGAGAGGCAGGATACATGGTTCGCTGACGATTCTCCTGTTATCAATAAC
                      ____________________________________________________________
consensus CACTGCCAGTCCGAGAGGCAGGATACATGGTTCGCTGACGATTCTCCTGTTATCAATAAC
 
. : . : . : . : . : . :
rJMFF006H13+ AAGGCAATTGCACTTGCGGTTGGAGATTGGTATTTTGATCGGGCTAGCGTGAAATATATT
rJMFF020N13+ AAGGCAATTGCACTTGCGGTTGGAGATTGGTATTTTGATCGGGCTAGCGTGAAATATATT
rJMFF005D09+ AAGGCAATTGCACTTGCGGTTGGAGATTGGTATTTTGATCGGGCTAGCGTGAAATATATT
                      ____________________________________________________________
consensus AAGGCAATTGCACTTGCGGTTGGAGATTGGTATTTTGATCGGGCTAGCGTGAAATATATT
 
. : . : . : . : . : . :
rJMFF006H13+ GACTGCGCATACCCTTGTGACAAAACATGCCACAACTTGGTGTTCAGATGAGCCTGAGCC
rJMFF020N13+ GACTGCGCATACCCTTGTGACAAAACATGCCACAACTTGGTGTTCAGATGAGCCTGAGCC
rJMFF005D09+ GACTGCGCATACCCTTGTGACAAAACATGCCACAACTTGGTGTTCAGATGAGCCTGAGCC
                      ____________________________________________________________
consensus GACTGCGCATACCCTTGTGACAAAACATGCCACAACTTGGTGTTCAGATGAGCCTGAGCC
 
. : . : . : . : . : . :
rJMFF006H13+ TGAGCCTGCACTTTTTATTTCTTTAATTTATTGAAAGAGTATAATAATTTTAGCTGAGTT
rJMFF020N13+ TGAGCCTGCACTTTTTATTTCTTTAATTTATTGAAAGAGTATAATAATTTTAGCTGAGTT
rJMFF005D09+ TGAGCCTGCACTTTTTATTTCTTTAATTTATTGAAAGAGTATAATAATTTTAGCTGAGTT
                      ____________________________________________________________
consensus TGAGCCTGCACTTTTTATTTCTTTAATTTATTGAAAGAGTATAATAATTTTAGCTGAGTT
 
. : . : . : . : . : . :
rJMFF006H13+ TATATAAGATAATCTGTGTCAGTAATTTATGTTTCCCATTAATTTGCAAATGTAAAAGAA
rJMFF020N13+ TATATAAGATAATCTGTGTCAGTAATTTATGTTTCCCATTAATTTGCAAATGTAAAAGAA
rJMFF005D09+ TATATAAGATAATCTGTGTCAGTAATTTATGTTTCCCATTAATTTGCAAATGTAAAAGAA
                      ____________________________________________________________
consensus TATATAAGATAATCTGTGTCAGTAATTTATGTTTCCCATTAATTTGCAAATGTAAAAGAA
 
. : . : . : . : . : . :
rJMFF006H13+ TTAAGGGATACAATAATGTGATGATTGTCTTGTCTTG
rJMFF020N13+ TTAAGGGATACAATAATGTGATGATTGTCTTGTCTTGTTGTAAGCAATTGTATTAA
rJMFF005D09+ TTAAGGGATACAATAATGTGATGATTGTCTTGTCTTGTTGTAAGCAATTGTATTAATATT
                      ____________________________________________________________
consensus TTAAGGGATACAATAATGTGATGATTGTCTTGTCTTGTTGTAAGCAATTGTATTAATATT