Contig 012221:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004C01Sequence500004791 (10)emb|CDP07016.1|7e-05unnamed protein product [Coffea canephora]800012221 (3)ref|XP_009592160.1|210PREDICTED: uncharacterized protein LOC104089053 [Nicotiana tomentosiformis]
JMSF015E03Sequence213004791 (10)729012221 (3)ref|XP_006487989.1|8e-90PREDICTED: uncharacterized protein LOC102623678 isoform X1 [Citrus sinensis] re
JMSF034B08Sequence150004791 (10)738012221 (3)ref|XP_009795667.1|187PREDICTED: uncharacterized protein LOC104242336 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF015E03+                                              CTCAGCAGGAGACGTGTTTNCAAT
                      ____________________________________________________________
consensus                                                 CTCAGCAGGAGACGTGTTTNCAAT
 
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rJMSF015E03+          CTACTTCAAAGTGGTTTCCGTGAGAGTCTAGACCAGCTGATACAGTCTTATGTNGAAAGG
                      ____________________________________________________________
consensus             CTACTTCAAAGTGGTTTCCGTGAGAGTCTAGACCAGCTGATACAGTCTTATGTNGAAAGG
 
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rJMSF015E03+          CAAGGGCATGCTTCTTTTGATTGGGAGATAAATGGAACTTCATCCTCCCCGGGTGACATT
                      ____________________________________________________________
consensus             CAAGGGCATGCTTCTTTTGATTGGGAGATAAATGGAACTTCATCCTCCCCGGGTGACATT
 
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rJMSF015E03+          GAGCAGGATCATCAGCAAGACAATGGTAATGAGGATGAAGATGAGCTAAATGGTATAGAA
                      ____________________________________________________________
consensus             GAGCAGGATCATCAGCAAGACAATGGTAATGAGGATGAAGATGAGCTAAATGGTATAGAA
 
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rJMSF015E03+          AGAGATCGCCTTGATATGANTTCACCAGATTCTCTCTCTCTGCCTATTTGGGAACAAGGG
                      ____________________________________________________________
consensus             AGAGATCGCCTTGATATGANTTCACCAGATTCTCTCTCTCTGCCTATTTGGGAACAAGGG
 
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rJMSF015E03+          TTGCCAGATTCAAATTTGTTTCACCACACCCCTCATCAGCATCCAGGAATGGAATGGGAA
rJMFF004C01+                                                  ATCCAGGAATGGAATGGGAA
                      ____________________________________________________________
consensus             TTGCCAGATTCAAATTTGTTTCACCACACCCCTCATCAGCATCCAGGAATGGAATGGGAA
 
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rJMSF015E03+          ATAATCAATGACTTCAGAATTAACATGGTTAGACTTCACCAGAGGATGGACAATATGCAG
rJMSF034B08+                                                CCAGAGGATGGACCATATGCAG
rJMFF004C01+          ATAATCAATGACTTCAGAATTAACATGGTTAGACTTCACCAGAGGATGGACAATATGCAG
                      ____________________________________________________________
consensus             ATAATCAATGACTTCAGAATTAACATGGTTAGACTTCACCAGAGGATGGACAATATGCAG
 
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rJMSF015E03+          AGGATGCTAGAAGCGTGCATGGAAATGCAAGTTGAACTGCAGCGTTCAGTGTGGCAAGAA
rJMSF034B08+          ACGATGCTAGAAGCGTGCATGGAAATGCAAGTTGAACTGCAGCGTTCAGTGTGGCAAGAA
rJMFF004C01+          AGGATGCTAGAAGCGTGCATGGAAATGCAAGTTGAACTGCAGCGTTCAGTGTGGCAAGAA
                      ____________________________________________________________
consensus             AGGATGCTAGAAGCGTGCATGGAAATGCAAGTTGAACTGCAGCGTTCAGTGTGGCAAGAA
 
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rJMSF015E03+          GTTTCTGCAGCATTAAATCGATTCGCACCAAAAATTGATGCGGACGTGTGCGACGACGTT
rJMSF034B08+          GTTTCTGCAGCATTAAATCGATTCGCACCAAAAATTGATGCGGACGTGTGCGACGACGTT
rJMFF004C01+          GTTTCTGCAGCATTAAATCGATTCGCACCAAAAATTGATGCGGACGTGTGCGACGACGTT
                      ____________________________________________________________
consensus             GTTTCTGCAGCATTAAATCGATTCGCACCAAAAATTGATGCGGACGTGTGCGACGACGTT
 
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rJMSF015E03+          CACCTGAACGATGTATCGAAGTGGGACAAAGTAAGAAAGGGAATTTGCTGCTTGTGTTGT
rJMSF034B08+          CACCTGAACGATGTATCGAAGTGGGACAAAGTAAGAAAGGGAATTTGCTGCTTGTGTTGT
rJMFF004C01+          CACCTGAACGATGTATCGAAGTGGGACAAAGTAAGAAAGGGAATTTGCTGCTTGTGTTGT
                      ____________________________________________________________
consensus             CACCTGAACGATGTATCGAAGTGGGACAAAGTAAGAAAGGGAATTTGCTGCTTGTGTTGT
 
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rJMSF015E03+          AACAGCAACATAGATTCCTTACTCTACAGGTGTGGGCACATGTGCACATGCTCAAAATGT
rJMSF034B08+          AACAGCAACATAGATTCCTTACTCTACAGGTGTGGGCACATGTGCACATGCTCAAAATGT
rJMFF004C01+          AACAGCAACATAGATTCCTTACTCTACAGGTGTGGGCACATGTGCACATGCTCAAAATGT
                      ____________________________________________________________
consensus             AACAGCAACATAGATTCCTTACTCTACAGGTGTGGGCACATGTGCACATGCTCAAAATGT
 
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rJMSF015E03+          GCAGAGAAGNTGGTCCAAGGACAAGGAAAGTGCCCAATGTGTCGGGCGCCAGTAGTTGAG
rJMSF034B08+          GCAGAGAAGTTGGTCCAAGGACAAGGAAAGTGCCCAATGTGTCGGGCGCCAGTAGTTGAG
rJMFF004C01+          GCAGAGAAGTTGGTCCAAGGACAAGGAAAGTGCCCAATGTGTCGGGCGCCAGTAGTTGAG
                      ____________________________________________________________
consensus             GCAGAGAAGTTGGTCCAAGGACAAGGAAAGTGCCCAATGTGTCGGGCGCCAGTAGTTGAG
 
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rJMSF015E03+          GTGATCCGAGCTTACTGTATACAATAATGGAGAATAGTAGGT                  
rJMSF034B08+          GTGATCCGAGCTTACNGTATACAATAATGGAGAATAGTAGGTTGATCTAAACCCGAATAA
rJMFF004C01+          GTGATCCGAGCTTACTGTATACAATAATGGAGAATAGTAGGTTGATCTAAACCCGAATAA
                      ____________________________________________________________
consensus             GTGATCCGAGCTTACTGTATACAATAATGGAGAATAGTAGGTTGATCTAAACCCGAATAA
 
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rJMSF034B08+          AATACGAGGAATATAATACTTTCAGCACACCTGCTGTTTTAGGTCTATCCAGGGATGGCT
rJMFF004C01+          AATACGAGGAATATAATACTTTCAGCACACCTGCTGTTTTAGGTCTATCCAGGGATGGCT
                      ____________________________________________________________
consensus             AATACGAGGAATATAATACTTTCAGCACACCTGCTGTTTTAGGTCTATCCAGGGATGGCT
 
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rJMSF034B08+          GCTAAATTCNTCGTTAAGGTTAGAATAAGCGGAGGTGAAGCTTCGTTTTCTCCTCCAAAC
rJMFF004C01+          GCTAAATTCATCTTTAAGGTTAGAATAAGCGGAGGTGAAGCTTCGTTTTCTCCTCCAAAC
                      ____________________________________________________________
consensus             GCTAAATTCATCTTTAAGGTTAGAATAAGCGGAGGTGAAGCTTCGTTTTCTCCTCCAAAC
 
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rJMSF034B08+          CCTAATATCGCTAACAGAGCTTTTATTTTTAATTTTTGGTGAATGGCTTGCAAGTACAAT
rJMFF004C01+          CCTAATATCGCTAACAGAGCTTTTATTTTTAATTTTTGGTGAATGGCTTGCAAGTACAAT
                      ____________________________________________________________
consensus             CCTAATATCGCTAACAGAGCTTTTATTTTTAATTTTTGGTGAATGGCTTGCAAGTACAAT
 
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rJMSF034B08+          CAGCATATACTGTTGCNGGGTGTGNGCATAGAACAATGAGGCATATTCACTGTAGGGAAA
rJMFF004C01+          CAGCATATACTGTTGCTGGGTGTGTGCATAGAACAATGAGGCATATTCACTGTAGGGAAA
                      ____________________________________________________________
consensus             CAGCATATACTGTTGCTGGGTGTGTGCATAGAACAATGAGGCATATTCACTGTAGGGAAA
 
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rJMSF034B08+          AACAAAGAAAAATCATCTGGAGACATCAACATATTTATACCTTGTAAGATGCTCAAAATG
rJMFF004C01+          AACAAAGAAAAATCATCTGGAGACATCAATATATTTATACCTTGTAAGATGCTCAAAATG
                      ____________________________________________________________
consensus             AACAAAGAAAAATCATCTGGAGACATCAATATATTTATACCTTGTAAGATGCTCAAAATG
 
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rJMSF034B08+          TGTAATGCTTTGGACCATTGTATCTTGGCATAACA                         
rJMFF004C01+          TGTAATGCTTTGGACCATTGTATCTTGGCATAACATTTAACTAAACTGGACAGGAATATA
                      ____________________________________________________________
consensus             TGTAATGCTTTGGACCATTGTATCTTGGCATAACATTTAACTAAACTGGACAGGAATATA