Contig 012220:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003N22Sequence510007343 (10)gb|AAF69014.1|AF260827_12e-62cysteine protease [Ipomoea batatas]774012220 (7)gb|AAF69014.1|AF260827_19e-94cysteine protease [Ipomoea batatas]
JMFF015N13Sequence554007343 (10)gb|AAF69014.1|AF260827_18e-87cysteine protease [Ipomoea batatas]530012220 (7)gb|AAF69014.1|AF260827_14e-49cysteine protease [Ipomoea batatas]
JMFF020O23Sequence540007343 (10)gb|AAF69014.1|AF260827_15e-68cysteine protease [Ipomoea batatas]779012220 (7)gb|AAF69014.1|AF260827_16e-114cysteine protease [Ipomoea batatas]
JMFF030D13Sequence450007343 (10)gb|AAF69014.1|AF260827_12e-63cysteine protease [Ipomoea batatas]715012220 (7)gb|AAF69014.1|AF260827_15e-97cysteine protease [Ipomoea batatas]
JMFN012L18Sequence638012220 (7)gb|AAF69014.1|AF260827_11e-80cysteine protease [Ipomoea batatas]
JMFN030K04Sequence648012220 (7)gb|AAF69014.1|AF260827_11e-145cysteine protease [Ipomoea batatas]
JMSF048A15Sequence687007343 (10)gb|AAF69014.1|AF260827_18e-106cysteine protease [Ipomoea batatas]798012220 (7)gb|AAF69014.1|AF260827_12e-119cysteine protease [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN012L18- ACTCGATTTGCTATACTAAAATGGGGGAGCACCATACCAAGG
                      ____________________________________________________________
consensus ACTCGATTTGCTATACTAAAATGGGGGAGCACCATACCAAGG
 
. : . : . : . : . : . :
JMFN012L18- AAATTTGGATGGTGGGTGACTGAGGTCCGTAGACTACTTTCGTATATTAAATACAGTGCA
                      ____________________________________________________________
consensus AAATTTGGATGGTGGGTGACTGAGGTCCGTAGACTACTTTCGTATATTAAATACAGTGCA
 
. : . : . : . : . : . :
JMFN012L18- GATATGATAGTGAATTTCTTCTATTTGCATAATTTATCCAAGTAGAAATTCATGCACTTG
                      ____________________________________________________________
consensus GATATGATAGTGAATTTCTTCTATTTGCATAATTTATCCAAGTAGAAATTCATGCACTTG
 
. : . : . : . : . : . :
JMFN012L18- ATGAAATGTATATTGGATACTGTCCCTTTATATGCTCCATTTATCAAAAGGGAAATCATT
                      ____________________________________________________________
consensus ATGAAATGTATATTGGATACTGTCCCTTTATATGCTCCATTTATCAAAAGGGAAATCATT
 
. : . : . : . : . : . :
JMFN012L18- ATCTCATTGCCTTAACACACGCAGGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
JMFN030K04- GGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
                      ____________________________________________________________
consensus ATCTCATTGCCTTAACACACGCAGGTTAAGGACAGGACTCTCAACGGAAACACAGCCTAT
 
. : . : . : . : . : . :
JMFN012L18- GGTTCCCATGTTATGCAATATGGTGATTTAGAACAGAATGTGGACTCTCTTTTTCTGTAT
JMFN030K04- GGTTCCCATGTTATGCAATATGGTGATTTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
rJMSF048A15+ TTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
rJMFF020O23+ TGTAT
                      ____________________________________________________________
consensus GGTTCCCATGTTATGCAATATGGTGATTTAGAGCAGAATGTGGACTCTCTTTTTCTGTAT
 
. : . : . : . : . : . :
JMFN012L18- ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
JMFN030K04- ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMSF048A15+ ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMFF020O23+ ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
rJMFF003N22+ ACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
                      ____________________________________________________________
consensus ATGGGTACAAATCCAGCAAATGAAAATTTCACTTTTGTGGATGAAAAATCGCTGAAATTA
 
. : . : . : . : . : . :
JMFN012L18- TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
JMFN030K04- TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMSF048A15+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF020O23+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF030D13+ TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
rJMFF003N22+ TCAGCGCCAAGAAAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
                      ____________________________________________________________
consensus TCAGCGCCAAG-AAGGGCTGTGAACCAGCGTGATGCAGATCTCTTGCATTTTTGGGACAA
 
. : . : . : . : . : . :
JMFN012L18- GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
JMFN030K04- GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMSF048A15+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF020O23+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF030D13+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
rJMFF003N22+ GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
                      ____________________________________________________________
consensus GTTCCGCAATGCTCCAGAAGGCTCGGCAAGGAAATCTGAAGCTCAGAAGCAGTTTACTGA
 
. : . : . : . : . : . :
JMFN012L18- AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
JMFN030K04- AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMSF048A15+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF020O23+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF030D13+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
rJMFF003N22+ AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
                      ____________________________________________________________
consensus AGCCATTTCACACAGAACACACCTAGACAACAGCATTTCACTCGTTGGAAAGCTCCTCTT
 
. : . : . : . : . : . :
JMFN012L18- TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCT
JMFN030K04- TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMSF048A15+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF020O23+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF030D13+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF015N13+ AAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
rJMFF003N22+ TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
                      ____________________________________________________________
consensus TGGAATCGAGAAAGGTCCCGAGGTGCTGAACAGCATCCGTGCTACTGGCCTACCCCTTGT
 
. : . : . : . : . : . :
JMFN030K04- TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMSF048A15+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF020O23+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF030D13+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF015N13+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
rJMFF003N22+ TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
                      ____________________________________________________________
consensus TGATGACTGGAGCTGCCTCAAGTCGTTTGTGAGAGCTTTCGAGACACACTGTGGTTCACT
 
. : . : . : . : . : . :
JMFN030K04- GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMSF048A15+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF020O23+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF030D13+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF015N13+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
rJMFF003N22+ GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
                      ____________________________________________________________
consensus GTCACAGTACGGGATGAAACACATGCGCTCCATTGCCAACATCTGCAATGCCGGGATTTC
 
. : . : . : . : . : . :
JMFN030K04- AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCNCTTCCTATTCCTG
rJMSF048A15+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF020O23+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF030D13+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF015N13+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
rJMFF003N22+ AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
                      ____________________________________________________________
consensus AGAGGAGCGGATGGTTGAGGCATCAGCTCAAGCTTGCCCAAGCTTCCCTTCCTATTCCTG
 
. : . : . : . : . : . :
JMFN030K04- GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCA
rJMSF048A15+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF020O23+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF030D13+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF015N13+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
rJMFF003N22+ GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
                      ____________________________________________________________
consensus GAGCTCTCTCCGCGGAGGATTCAGTGCATAATTTGCAGTGTGAATTGTGTAATTATCTGG
 
. : . : . : . : . : . :
rJMSF048A15+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF020O23+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF030D13+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF015N13+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
rJMFF003N22+ GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
                      ____________________________________________________________
consensus GGGTTTCATTATCAGCCTAGGTGCTAATTCAGATATTTGGGGGTTTCATTATCAATATAT
 
. : . : . : . : . : . :
rJMSF048A15+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF020O23+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF030D13+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF015N13+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
rJMFF003N22+ GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
                      ____________________________________________________________
consensus GATCAGAGAATTAATATTATGATGATGATTTTAGATTTACTGCTTGTTATTATAATAGCT
 
. : . : . : . : . : . :
rJMSF048A15+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF020O23+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF030D13+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF015N13+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
rJMFF003N22+ TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
                      ____________________________________________________________
consensus TCATGGCCTATTGGCCTGCATGTAAATCTTGTTGTGATGCGCTTTCTATCGGAATGGGGA
 
. : . : . : . : . : . :
rJMSF048A15+ TATAGCCAACCCATCTCTCTTTGTAAATAAT
rJMFF020O23+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF030D13+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF015N13+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAA
rJMFF003N22+ TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAATGAGT
                      ____________________________________________________________
consensus TATAGCCAACCCATCTCTCTTTGTAAATAATGTCCTAAACATATATATACCATAATGAGT