Contig 012188:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C07Sequence576012188 (5)ref|XP_009768363.1|2e-53PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana sylvestris] ref|728010994 (4)
JMFF024N10Sequence460012188 (5)ref|XP_011085424.1|3e-34PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Sesamum indicum]691010994 (4)ref|XP_009601056.1|4e-35PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana tomentosiformis]
JMFS027D07Sequence559012188 (5)gb|ACU23227.1|2e-40unknown [Glycine max]
JMFS086E04Sequence612012188 (5)ref|XP_009768363.1|1e-51PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Nicotiana sylvestris] ref|
JMSF049H09Sequence635012188 (5)gb|ACU23227.1|3e-54unknown [Glycine max]746010994 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF010C07+ GAAGGGCAGCCCGAATAACAACTAAC
JMFS086E04+ GAAGGGCAGCCCGAATAACAACTAAC
JMSF049H09+ TCTGCAGCTGAAGGGCAGCCCGAATAACAACTAAC
                      ____________________________________________________________
consensus TCTGCAGCTGAAGGGCAGCCCGAATAACAACTAAC
 
. : . : . : . : . : . :
JMFS027D07+ AACATGCCCCGCCCAATCACAATT
JMFF010C07+ TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
JMFS086E04+ TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCNCCGCCCAATCACAATT
JMSF049H09+ TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
                      ____________________________________________________________
consensus TGCTTGCCTCTTGTGGGTTGAACCCGTGCTAGAACTAACATGCCCCGCCCAATCACAATT
 
. : . : . : . : . : . :
JMFS027D07+ CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFF010C07+ CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFF024N10+ TGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMFS086E04+ CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
JMSF049H09+ CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
                      ____________________________________________________________
consensus CTGGCAAAGAGATACCCTTTCCTCAATGCATCTCACAAAAGCAGGCTGTGCATTGCATCT
 
. : . : . : . : . : . :
JMFS027D07+ CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFF010C07+ CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFF024N10+ CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMFS086E04+ CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
JMSF049H09+ CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
                      ____________________________________________________________
consensus CTCACATACAAGTGTCCTGGGGTGGCGCCGTGAAAGGGCATTTGCAGAATGAACATTCCG
 
. : . : . : . : . : . :
JMFS027D07+ GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFF010C07+ GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFF024N10+ GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMFS086E04+ GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
JMSF049H09+ GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
                      ____________________________________________________________
consensus GTCACAGGACAGACACAAACAAGCTGCATCAGACCGACAATATACAATAGATCGCTGCTC
 
. : . : . : . : . : . :
JMFS027D07+ CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFF010C07+ CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFF024N10+ CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMFS086E04+ CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
JMSF049H09+ CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
                      ____________________________________________________________
consensus CCCGCAAAATTCACACATATAACCCATTACTCTCTTTCGATTTTCCAAGATCAAAGCCCA
 
. : . : . : . : . : . :
JMFS027D07+ GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFF010C07+ GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFF024N10+ GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMFS086E04+ GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
JMSF049H09+ GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
                      ____________________________________________________________
consensus GCAAGCTCACAATTCTCAGAACTTGAGCTTGGCACTATCCTTTTAACCGAATAAAATAGC
 
. : . : . : . : . : . :
JMFS027D07+ TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
JMFF010C07+ TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC
JMFF024N10+ TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC
JMFS086E04+ TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGC
JMSF049H09+ TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
                      ____________________________________________________________
consensus TTATGAATGAAGACTTCCAACAAACAATCACTCCTCACAGTGCTTTTTGCGTAAATTAAC
 
. : . : . : . : . : . :
JMFS027D07+ TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
JMSF049H09+ TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
                      ____________________________________________________________
consensus TGTGAAGCAGGCCAAGAAAACGGTAGAACAGAGACAAGTACAGATAACCTTTTTTCTCAG
 
. : . : . : . : . : . :
JMFS027D07+ CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
JMSF049H09+ CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
                      ____________________________________________________________
consensus CAGCTTTCACATGGACAATGAAAACCCTAAAACAGAAAGATCAGACCTTTCCAGACACCC
 
. : . : . : . : . : . :
JMFS027D07+ TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCT
JMSF049H09+ TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCTATGCTC
                      ____________________________________________________________
consensus TTTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTATATATCTCTCTCGCACCTATGCTC