Contig 012174:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037N06Sequence661012174 (3)ref|XP_007225145.1|8e-66hypothetical protein PRUPE_ppa002452mg [Prunus persica] gb|EMJ26344.1| hypotheti
JMSF044F10Sequence753012174 (3)ref|XP_007225145.1|7e-76hypothetical protein PRUPE_ppa002452mg [Prunus persica] gb|EMJ26344.1| hypotheti775022637ref|XP_006344155.1|3e-154PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-
JMSF047P01Sequence602012174 (3)ref|XP_007225145.1|3e-45hypothetical protein PRUPE_ppa002452mg [Prunus persica] gb|EMJ26344.1| hypotheti149021590

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044F10+                          CGGTAACCCGCGAGCATTTCGGCAAAGGAGGCCCGCAAAGAACGG
                      ____________________________________________________________
consensus                            CGGTAACCCGCGAGCATTTCGGCAAAGGAGGCCCGCAAAGAACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+                                        CCAGAGAGAGAAGCGGGTATCTCCCCAACAA
JMSF044F10+           GGTTGTTGGCGAATGAGGATTCGGGGAAACCAGAGAGAGAAGCGGGTATCTCCCCAACAA
                      ____________________________________________________________
consensus             GGTTGTTGGCGAATGAGGATTCGGGGAAACCAGAGAGAGAAGCGGGTATCTCCCCAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           GTCTGTTCCCGGAGACGTTGAAGTCCTGGAGATTCGGGAGGTTGACGCCGGAAATCGAAC
JMSF044F10+           GTCTGTTCCCGGAGACGTTGAAGTCCTGGAGATTCGGGAGGTTGACGCCGGAAATCGAAC
                      ____________________________________________________________
consensus             GTCTGTTCCCGGAGACGTTGAAGTCCTGGAGATTCGGGAGGTTGACGCCGGAAATCGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           CGGAGAACCCGTTTTCCTCGAGGCGCAGGGTGAGCAGATGAGTCAAATGGCTCGCACTCG
JMSF044F10+           CGGAGAACCCGTTTTCCTCGAGGCGCAGGGTGAGCAGATGAGTCAAATGGCTCGCACTCG
JMSF047P01+                                                                     CG
                      ____________________________________________________________
consensus             CGGAGAACCCGTTTTCCTCGAGGCGCAGGGTGAGCAGATGAGTCAAATGGCTCGCACTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           CCGGAATCTCACCGGAGAAATTATTATGCGACAGATCAAGCCTGTACAGCCTGAACAACG
JMSF044F10+           CCGGAATCTCACCGGAGAAATTATTATGCGACAGATCAAGCCTGTACAGCCTGAACAACG
JMSF047P01+           CCGGAATCTCACCGGAGAAATTATTATGCGACAGATCAAGCCTGTACAGCCTGAACAACG
                      ____________________________________________________________
consensus             CCGGAATCTCACCGGAGAAATTATTATGCGACAGATCAAGCCTGTACAGCCTGAACAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           ACGTCAGAGACGCCGGAAACTCGCCCGAGAGCTCATTGTACGAAAGAAACAACAGCTTCA
JMSF044F10+           ACGTCAGAGACGCCGGAAACTCGCCCGAGAGCTCATTGTACGAAAGAAACAACAGCTTCA
JMSF047P01+           ACGTCAGAGACGCCGGAAACTCGCCCGAGAGCTCATTGTACGAAAGAAACAACAGCTTCA
                      ____________________________________________________________
consensus             ACGTCAGAGACGCCGGAAACTCGCCCGAGAGCTCATTGTACGAAAGAAACAACAGCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           GTGCAGTGAGCTTAGAAAGGTCGGGGAGAGGACCCGTGAACCGGTTCCACTTGAGACTGA
JMSF044F10+           GTGCAGTGAGCTTAGAAAGGTCGGGGAGAGGACCCGTGAACCGGTTCCACTTGAGACTGA
JMSF047P01+           GTGCAGTGAGCTTAGAAAGGTCGGGGAGAGGACCCGTGAACCGGTTCCACTTGAGACTGA
                      ____________________________________________________________
consensus             GTGCAGTGAGCTTAGAAAGGTCGGGGAGAGGACCCGTGAACCGGTTCCACTTGAGACTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           GAACCCGGAGCTGGGTGAGCGAACTAAGCTGCTGAAACGAGCCATGGAGGTCGAAACCTT
JMSF044F10+           GAACCCGGAGCTGGGTGAGCGAACTAAGCTGCTGAAACGAGCCATGGAGGTCGAAACCTT
JMSF047P01+           GAACCCGGAGCTGGGTGAGCGAACTAAGCTGCTGAAACGAGCCATGGAGGTCGAAACCTT
                      ____________________________________________________________
consensus             GAACCCGGAGCTGGGTGAGCGAACTAAGCTGCTGAAACGAGCCATGGAGGTCGAAACCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           CAAGAACGAGGCGAGAAACCCGGTTGTTTTGGCAAGAAACACCAGTCCACCCACACAGGT
JMSF044F10+           CAAGAACGAGGCGAGAAACCCGGTTGTTTTGGCAAGAAACACCAGTCCACCCACACAGGT
JMSF047P01+           CAAGAACGAGGCGAGAAACCCGGTTGTTTTGGCAAGAAACACCAGTCCACCCACACAGGT
                      ____________________________________________________________
consensus             CAAGAACGAGGCGAGAAACCCGGTTGTTTTGGCAAGAAACACCAGTCCACCCACACAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           CGGAGCTGGAGTTCCAATCCCACAGCTTATTAGAAGTGTCCACAGCGGCTTTGAAGGACA
JMSF044F10+           CGGAGCTGGAGTTCCAATCCCACAGCTTATTAGAAGTGTCCACAGCGGCTTTGAAGGACA
JMSF047P01+           CGGAGCTGGAGTTCCAATCCCNCAGCTTATTAGAAGTGTCCACAGCGGCTTTGAAGGACA
                      ____________________________________________________________
consensus             CGGAGCTGGAGTTCCAATCCCACAGCTTATTAGAAGTGTCCACAGCGGCTTTGAAGGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           GCAACGTCTCAGCGTCTGGGTTTGAAGCAGCGTTTAGGAAGGAGAAATGGAAGAGAATGA
JMSF044F10+           GCAACGTCTCAGCGTCTGGGTTTGAAGCAGCGTTTAGGAAGGAGAAATGGAAGAGAATGA
JMSF047P01+           GCAACGTCTCAGCGTCTGGGTTTGAAGCAGCGTTTAGGAAGGAGAAATGGAAGAGAATGA
                      ____________________________________________________________
consensus             GCAACGTCTCAGCGTCTGGGTTTGAAGCAGCGTTTAGGAAGGAGAAATGGAAGAGAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           GAAGCAAGAGATAGAGAGATAAATGCAGTAGCGTTCTCAGTCTCGCCATTGTAGAGAGAG
JMSF044F10+           GAAGCAAGAGATAGAGAGATAAATGCAGTAGCGTTCTCAGTCTCGCCATTGTAGAGAGAG
JMSF047P01+           GAAGCAAGAGATAGAGAGATAAATGCAGTAGCGTTCTCAGTCTCGCCATTGTAGAGAGAG
                      ____________________________________________________________
consensus             GAAGCAAGAGATAGAGAGATAAATGCAGTAGCGTTCTCAGTCTCGCCATTGTAGAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF037N06+           AAGGTGAAGGTGGAGAAGAAATGGCGT                                 
JMSF044F10+           AAGGTGAAGGTGGAGAAGAAATGGCGTATGGAGGGAGGGAGCAGG               
JMSF047P01+           AAGGTGAAGGTGGAGAAGAAATGGCGTATGGAGGGAGGGAGCAGGTTGAAGGGTGAAGAA
                      ____________________________________________________________
consensus             AAGGTGAAGGTGGAGAAGAAATGGCGTATGGAGGGAGGGAGCAGGTTGAAGGGTGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF047P01+           AGAGGGTTAAGAGTGTAATTAATGCAAAAGCAATGGGACAATTGGTGAATAATAAATGCC
                      ____________________________________________________________
consensus             AGAGGGTTAAGAGTGTAATTAATGCAAAAGCAATGGGACAATTGGTGAATAATAAATGCC