Contig 012168:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I13Sequence454012168 (2)ref|XP_009623304.1|9e-07PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230698014109 (3)emb|CDP10226.1|5e-108unnamed protein product [Coffea canephora]
JMSF047E10Sequence706012168 (2)ref|XP_009623304.1|6e-09PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230770014109 (3)emb|CDP10226.1|8e-117unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002I13+ GAACCCATCAGTGTTGGGTTGCTGGCAAACCAATGG
JMSF047E10+ TGGAGACAAAGAACCCATCAGTGTTGGGTTGCTGGCAANCCAATGG
                      ____________________________________________________________
consensus TGGAGACAAAGAACCCATCAGTGTTGGGTTGCTGGCAAACCAATGG
 
. : . : . : . : . : . :
JMSF002I13+ CNTAAAACACACAGAAACCACCAGAAAAAACCCCAAAATTCCAACCCCCATCAGAGTATT
JMSF047E10+ CCTAAAACACACAGAAACCACCAGAAAAAACCCCAAAATTCCAACCCCCATCAGAGTATT
                      ____________________________________________________________
consensus CCTAAAACACACAGAAACCACCAGAAAAAACCCCAAAATTCCAACCCCCATCAGAGTATT
 
. : . : . : . : . : . :
JMSF002I13+ AGGCGCCAATCTGTACGGCTACTGTTCTTTAAAAGGGAAATTTCTTAATTTCCCCTCAGA
JMSF047E10+ AGGCGCCAATCTGTACGGCTACTGTTCTTTAAAAGGGAAATTTCTTAATTTCCCCTCAGA
                      ____________________________________________________________
consensus AGGCGCCAATCTGTACGGCTACTGTTCTTTAAAAGGGAAATTTCTTAATTTCCCCTCAGA
 
. : . : . : . : . : . :
JMSF002I13+ ATTGAAAAACACCAACAAGTCAACAACCCCAAAAAGTCTCCTTTCTCAGACTATTACCAC
JMSF047E10+ ATTGAAAAACACCAACAAGTCAACAACCCCAAAAAGTCTCCTTTCTCAGACTATTACCAC
                      ____________________________________________________________
consensus ATTGAAAAACACCAACAAGTCAACAACCCCAAAAAGTCTCCTTTCTCAGACTATTACCAC
 
. : . : . : . : . : . :
JMSF002I13+ TCTCTTTTCAAACCTTATCAAAAACCAACACAGATTCCAAAGACATCTGCTAAAACCAAA
JMSF047E10+ TCTCTTTTCAAACCTTATCAAAAACCAACACAGATTCCAAAGACATCTGCTAAAACCAAA
                      ____________________________________________________________
consensus TCTCTTTTCAAACCTTATCAAAAACCAACACAGATTCCAAAGACATCTGCTAAAACCAAA
 
. : . : . : . : . : . :
JMSF002I13+ ACCACATAACATAAAATAATTTTATTTCTGGTCAAAAATCAAATCTTGAGCAGTGGGTTT
JMSF047E10+ ACCACATAACATAAAATAATTTTATTTCTGGTCAAAAATCAAATCTTGAGCAGTGGGTTT
                      ____________________________________________________________
consensus ACCACATAACATAAAATAATTTTATTTCTGGTCAAAAATCAAATCTTGAGCAGTGGGTTT
 
. : . : . : . : . : . :
JMSF002I13+ GAGCCAAGAACCAGTGGAAGTGGCACACAAGTGAAAGGCTTGTCAGAGAACCATGCATGT
JMSF047E10+ GAGCCAAGAACCAGTGGAAGTGGCACACAAGTGAAAGGCTTGTCAGAGAACCATGCATGT
                      ____________________________________________________________
consensus GAGCCAAGAACCAGTGGAAGTGGCACACAAGTGAAAGGCTTGTCAGAGAACCATGCATGT
 
. : . : . : . : . : . :
JMSF002I13+ CTAATGAACCCAACACAGAAAACAAAACCCAAAGCTGAATAGCACTTGAGATGCTC
JMSF047E10+ CTAATGAACCCAACACAGAAAACAAAACCCAAAGCTGAATAGCACTTGAGATGCTCCAAA
                      ____________________________________________________________
consensus CTAATGAACCCAACACAGAAAACAAAACCCAAAGCTGAATAGCACTTGAGATGCTCCAAA
 
. : . : . : . : . : . :
JMSF047E10+ ATTCTTAGAACATCCCTCCTCAAATGAAACAACAAAAGCTACTTTGAAGTGAAACAGAGA
                      ____________________________________________________________
consensus ATTCTTAGAACATCCCTCCTCAAATGAAACAACAAAAGCTACTTTGAAGTGAAACAGAGA
 
. : . : . : . : . : . :
JMSF047E10+ ACACAAAAGCAATTTTCTTTTTTAACTTTGTTTTTAGAATCTAGTTGGGGGCAGCAAATT
                      ____________________________________________________________
consensus ACACAAAAGCAATTTTCTTTTTTAACTTTGTTTTTAGAATCTAGTTGGGGGCAGCAAATT
 
. : . : . : . : . : . :
JMSF047E10+ GACACTGGTGAGGTAGGGGTGAGGCATTAAAGTTTGAGGTTCATAAATGAAAAGGAATGA
                      ____________________________________________________________
consensus GACACTGGTGAGGTAGGGGTGAGGCATTAAAGTTTGAGGTTCATAAATGAAAAGGAATGA
 
. : . : . : . : . : . :
JMSF047E10+ AGGAAAGGGGCTTTTGGGTGATGAATAATGGATTTAGCAGAGAGCTGTTGGTGGAAAATC
                      ____________________________________________________________
consensus AGGAAAGGGGCTTTTGGGTGATGAATAATGGATTTAGCAGAGAGCTGTTGGTGGAAAATC