Contig 012157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K11Sequence641012157 (5)ref|XP_009779935.1|8e-34PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nicotiana sylv767011416 (3)ref|XP_010315626.1|1e-114PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Sol
JMFF027D09Sequence557012157 (5)ref|XP_009779935.1|2e-19PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nicotiana sylv754011416 (3)ref|XP_010315626.1|9e-115PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Sol
JMFS001H05Sequence620012157 (5)ref|XP_009779935.1|6e-31PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nicotiana sylv
JMFS130E02Sequence623012157 (5)ref|XP_010315627.1|7e-23PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X3 [Sol
JMSF046A07Sequence681012157 (5)ref|XP_009779935.1|7e-39PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nicotiana sylv699011416 (3)ref|XP_006360317.1|4e-66PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like [Solanum t

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS130E02+ TTTGAGAACTGATGATAAAGTTAAGGATCAATTATAGTTGATCAAAAACATAAAAATT
                      ____________________________________________________________
consensus TTTGAGAACTGATGATAAAGTTAAGGATCAATTATAGTTGATCAAAAACATAAAAATT
 
. : . : . : . : . : . :
JMFS130E02+ AAAAAGAATATTTTAAAAATGACACGTGTCATGCTTGGGAAGAATTAACCTACTATACTC
                      ____________________________________________________________
consensus AAAAAGAATATTTTAAAAATGACACGTGTCATGCTTGGGAAGAATTAACCTACTATACTC
 
. : . : . : . : . : . :
JMFS130E02+ GTCAATTTGGACTCAATTGAACAATTTTACAGGTTTAGGGGATCTGAATGGAGCTTTTTT
                      ____________________________________________________________
consensus GTCAATTTGGACTCAATTGAACAATTTTACAGGTTTAGGGGATCTGAATGGAGCTTTTTT
 
. : . : . : . : . : . :
JMFS130E02+ TACTTAGGAACCTAATTGCAATATCCGAATGACTTAGGAGGCCAATTTGACCCTTTTTCC
                      ____________________________________________________________
consensus TACTTAGGAACCTAATTGCAATATCCGAATGACTTAGGAGGCCAATTTGACCCTTTTTCC
 
. : . : . : . : . : . :
JMFS130E02+ AAAATTTAAATCAACTTTCCCCAAGTAGCCTCTTAATCAATCCAAGACTCTAAGTGCAAT
                      ____________________________________________________________
consensus AAAATTTAAATCAACTTTCCCCAAGTAGCCTCTTAATCAATCCAAGACTCTAAGTGCAAT
 
. : . : . : . : . : . :
JMFS130E02+ AATATTAAAATGCAATAAGATAACAATCCTGATTATAGGCTTTATGCTGCATGACACCAT
                      ____________________________________________________________
consensus AATATTAAAATGCAATAAGATAACAATCCTGATTATAGGCTTTATGCTGCATGACACCAT
 
. : . : . : . : . : . :
JMFS130E02+ TTCTCCGCAAGGTTTCCCCAGAAATCATTCGCTGGGAAAAGTATGTAAGTAGCTCACTAC
                      ____________________________________________________________
consensus TTCTCCGCAAGGTTTCCCCAGAAATCATTCGCTGGGAAAAGTATGTAAGTAGCTCACTAC
 
. : . : . : . : . : . :
JMFS130E02+ TTAGAGGTTCCAATCTCAAACTGTGCTCATCTAACTGTCTGTATTTCTTATTTGATTTCA
                      ____________________________________________________________
consensus TTAGAGGTTCCAATCTCAAACTGTGCTCATCTAACTGTCTGTATTTCTTATTTGATTTCA
 
. : . : . : . : . : . :
JMFS130E02+ AGCTCTTCTTCATATCTCCATTTGTTGACTTCGTATCTCCCAATGCCTGTGCGCTGCCTC
JMSF046A07+ CCAATGCCTGTGCGCTGCCTC
                      ____________________________________________________________
consensus AGCTCTTCTTCATATCTCCATTTGTTGACTTCGTATCTCCCAATGCCTGTGCGCTGCCTC
 
. : . : . : . : . : . :
JMFS130E02+ TCCAGCCACATTTACCTCGAAAGCAGGTCCATAAAGCTGTATCCCCTTTATGATCAATAT
JMFF007K11+ AAAGCAGGTCCATAAAGCTGTATCCCCTTTATGATCAATAT
JMFS001H05+ AAAGCAGGTCCATANAGCTGTATCCCCTTATGNATCAATAT
JMSF046A07+ TCCAGCCACATTTACCTCGAAAGCAGGTCCATAAAGCTGTATCCCCTTTATGATCAATAT
                      ____________________________________________________________
consensus TCCAGCCACATTTACCTCGAAAGCAGGTCCATAAAGCTGTATCCCCTTTATGATCAATAT
 
. : . : . : . : . : . :
JMFS130E02+ AAAGAGATAAGCTCCTCTCATTATT
JMFF007K11+ AAAGAGATAAGCTCCTCTCATTATTGTCCCCGCCTTTGCACATTGGACAATGCAATCCAG
JMFS001H05+ AAAGAGATAAGCTCCTCTCATTATTGTCNCCGCCTNTGCACATTGGACAATGCAATCCAG
JMFF027D09+ TTGGACAATGCAATCCAG
JMSF046A07+ AAAGAGATAAGCTCCTCTCATTATTGTCCCCGCCTTTGCACATTGGACAATGCAATCCAG
                      ____________________________________________________________
consensus AAAGAGATAAGCTCCTCTCATTATTGTCCCCGCCTTTGCACATTGGACAATGCAATCCAG
 
. : . : . : . : . : . :
JMFF007K11+ AGTATTGGCCAGGGGCACACGAACCACTATCTATACCGGCCTCCTTAAGTTTCTGGTTCA
JMFS001H05+ AGTATTGGCCAGGGGCACACGAACCACTATCTATACCGGCCTCCTTAAGTTTCTGGTTCA
JMFF027D09+ AGTATTGGCCAGGGGCACACGAACCACTATCTATACCGGCCTCCTTAAGTTTCTGGTTCA
JMSF046A07+ AGTATTGGCCAGGGGCACACGAACCACTATCTATACCGGCCTCCTTAAGTTTCTGGTTCA
                      ____________________________________________________________
consensus AGTATTGGCCAGGGGCACACGAACCACTATCTATACCGGCCTCCTTAAGTTTCTGGTTCA
 
. : . : . : . : . : . :
JMFF007K11+ ACAAGTTCAATCGCGAGGATTTCGCCTCGGGGCCATCTTCCAGGGAAACTGGCGGGGGAA
JMFS001H05+ ACAAGTTCAATCGCGAGGATTTCGCCTCGGGGCCATCTTCCAGGGAAACTGGCGGGGGAA
JMFF027D09+ ACAAGTTCAATCGCGAGGATTTCGCCTCGGGGCCATCTTCCAGGGAAACTGGCGGGGGAA
JMSF046A07+ ACAAGTTCAATCGCGAGGATTTCGCCTCGGGGCCATCTTCCAGGGAAACTGGCGGGGGAA
                      ____________________________________________________________
consensus ACAAGTTCAATCGCGAGGATTTCGCCTCGGGGCCATCTTCCAGGGAAACTGGCGGGGGAA
 
. : . : . : . : . : . :
JMFF007K11+ CGGGATGGGCCCTGTAGGACAAACGGGAGGCCTGACGAGCGGGGGAGACGGGTTTGGAAG
JMFS001H05+ CGGGATGGGCCCTGTAGGACAAACGGGAGGCCTGACGAGCGGGGGAGACGGGTTTGGAAG
JMFF027D09+ CGGGATGGGCCCTGTAGGACAAACGGGAGGCCTGACGAGCGGGGGAGACGGGTTTGGAAG
JMSF046A07+ CGGGATGGGCCCTGTAGGACAAACGGGAGGCCTGACGAGCGGGGGAGACGGGTTTGGAAG
                      ____________________________________________________________
consensus CGGGATGGGCCCTGTAGGACAAACGGGAGGCCTGACGAGCGGGGGAGACGGGTTTGGAAG
 
. : . : . : . : . : . :
JMFF007K11+ CAAATGCAGTAAATATGAGGCCGTGGCCGTGAGTGTGGATGAGACGGGAAGGAACTGAGG
JMFS001H05+ CAAATGCAGTAAATATGAGGCCGTGGCCGTGAGTGTGGATGAGACGGGAAGGAACTGAGG
JMFF027D09+ CAAATGCAGTAAATATGAGGCCGTGGCCGTGAGTGTGGATGAGACGGGAAGGAACTGAGG
JMSF046A07+ CAAATGCAGTAAATATGAGGCCGTGGCCGTGAGTGTGGATGAGACGGGAAGGAACTGAGG
                      ____________________________________________________________
consensus CAAATGCAGTAAATATGAGGCCGTGGCCGTGAGTGTGGATGAGACGGGAAGGAACTGAGG
 
. : . : . : . : . : . :
JMFF007K11+ GCGTTATGGAATTCAAAACCGGTTTCGGTGCGACTATGAAGGAGGACTTCAAGGAAGTGT
JMFS001H05+ GCGTTATGGAATTCAAAACCGGTTTCGGCGCGACTATGAAGGAGGACTTCAAGGAAGTGT
JMFF027D09+ GCGTTATGGAATTCAAAACCGGTTTCGGTGCGACTATGAAGGAGGACTTCAAGGAAGTGT
JMSF046A07+ GCGTTATGGAATTCAAAACCGGTTTCGGCGCGACTATGAAGGAGGACTTCAAGGAAGTGT
                      ____________________________________________________________
consensus GCGTTATGGAATTCAAAACCGGTTTCGGTGCGACTATGAAGGAGGACTTCAAGGAAGTGT
 
. : . : . : . : . : . :
JMFF007K11+ GCACCAGATGCTTGGAAGACGCCATTATCACCAGAAGATTGTTCAACTTACAGCTACAGC
JMFS001H05+ GCACCAGATGCTTGGAAGACGCCATTATCACCAGAAGATTGTTCAACTTACAGCTACAGC
JMFF027D09+ GCACCAGATGCTTGGAAGACGCCATTATCACCAGAAGATTGTTCAACTTACAGCTACAGC
JMSF046A07+ GCACCAGATGCTTGGAAGACGCCATTATCACCAGAAGATTGTTCAACTTACAGCTACAGC
                      ____________________________________________________________
consensus GCACCAGATGCTTGGAAGACGCCATTATCACCAGAAGATTGTTCAACTTACAGCTACAGC
 
. : . : . : . : . : . :
JMFF007K11+ TACTGAAACTGTACGAGAAGAGTCCTCCGCGAGTTTGAAGGTGAAGCATAGCAGAAGCAA
JMFS001H05+ TACTGAAACTGTACGAGAAGAGTCCTCCGCGAGTTTGAAGGTGAAGCATAGCAGAAGCAA
JMFF027D09+ TACTGAAACTGTACGAGAAGAGTCCTCCGCGAGTTTGAAGGTGAAGCATAGCAGAAGCAA
JMSF046A07+ TACTGAAACTGTACGAGAAGAGTCCTCCGCGAGTTTGAAGGTGAAGCATAGCAGAAGCAA
                      ____________________________________________________________
consensus TACTGAAACTGTACGAGAAGAGTCCTCCGCGAGTTTGAAGGTGAAGCATAGCAGAAGCAA
 
. : . : . : . : . : . :
JMFF007K11+ CACGCTATTCCTCTTCTTTTTAGCTTTCAGGAAGCAGAAGCAGAAAGGAAACGGGCGGCT
JMFS001H05+ CACGCTATTCCTCTTCTTTTTAGCTTTCAGGAAGCAGAAGCAGAAAGGAAATGGGCGGCT
JMFF027D09+ CACGCTATTCCTCTTCTTTTTAGCTTTCAGGAAGCAGAAGCAGAAAGGAAACGGGCGGCT
JMSF046A07+ CACGCTATTCCTCTTCTTTTTAGCTTTCAGGAAGCAGAAGCAGAAAGGAAATGGGCGGCT
                      ____________________________________________________________
consensus CACGCTATTCCTCTTCTTTTTAGCTTTCAGGAAGCAGAAGCAGAAAGGAAATGGGCGGCT
 
. : . : . : . : . : . :
JMFF007K11+ GCGAATATGAGATTGCTCATCTCCTTATTTGGTACTGATAGACTTCATTCATTCAACAT
JMFS001H05+ GCGAATATGAGATTGCTCATCTCCTTATTTGGTACTGAT
JMFF027D09+ GCGAATATGAGATTGCTCATCTCCTTATTTGGTACTGATAGACTTCATTCATTCAACAT
JMSF046A07+ GCGAATATGAGATTGCTCATCTCCTTATTTGGTACTGATAGACTTCATTCATTCAACATC
                      ____________________________________________________________
consensus GCGAATATGAGATTGCTCATCTCCTTATTTGGTACTGATAGACTTCATTCATTCAACATC