Contig 012147:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021H07Sequence551012147 (3)ref|XP_006353741.1|1e-63PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum]740014091 (3)gb|EYU25780.1|1e-95hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata]
JMFF039F13Sequence521012147 (3)ref|XP_006353741.1|5e-61PREDICTED: organic cation/carnitine transporter 7-like [Solanum tuberosum]744014091 (3)gb|EYU25780.1|9e-95hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata]
JMSF044A14Sequence492012147 (3)ref|XP_009800312.1|4e-39PREDICTED: organic cation/carnitine transporter 7 [Nicotiana sylvestris]653014091 (3)gb|EYU25780.1|1e-72hypothetical protein MIMGU_mgv1a005148mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF021H07+                                                  GAGAAGATAACCATCCATAAC
                      ____________________________________________________________
consensus                                                    GAGAAGATAACCATCCATAAC
 
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JMFF039F13+              CCGGTTTTCTGGAGGTACAAATTCAAGAAACCAAGAGGAGTACACAGGCCCACTGGC
JMFF021H07+           CCCCCGGTTTTCTGGAGGTACAAATTCAAGAAACCAAGAGGAGTACACAGGCCCACCGGC
                      ____________________________________________________________
consensus             CCCCCGGTTTTCTGGAGGTACAAATTCAAGAAACCAAGAGGAGTACACAGGCCCACTGGC
 
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JMFF039F13+           CAGGCCAGTGCCAACCAACATACGAAGGACAAGCAAAGATATATAATTTGGGGAAAAGGC
JMFF021H07+           CAGGCCAGTGCCAACCAACATACGAAGGACAAGCAAAGATATATAATTTGGGGAAAAGGC
JMSF044A14+                                                           TGGGGAAAAGGC
                      ____________________________________________________________
consensus             CAGGCCAGTGCCAACCAACATACGAAGGACAAGCAAAGATATATAATTTGGGGAAAAGGC
 
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JMFF039F13+           ACTTAAAAATGCAGTTACAGTTGTCACGACTGCTACACTCAAAAGGCCCTTCCTTCTTCC
JMFF021H07+           ACTTAAAAATGCAGTTACAGTTGTCACGACTGCTACACTCAAAAGGCCCTTCCTTCTTCC
JMSF044A14+           ACTTAAAAATGCAGTTACAGTTGTCACGACTGCTACACTCAAAAGGCCCTTCCTTCTTCC
                      ____________________________________________________________
consensus             ACTTAAAAATGCAGTTACAGTTGTCACGACTGCTACACTCAAAAGGCCCTTCCTTCTTCC
 
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JMFF039F13+           ACAGTTATCAGCAACGATGCCCCAGAAATAAGCTCCGACTAACATGCCGGCGAAACCAAC
JMFF021H07+           ACAGTTATCAGCAACGATGCCCCAGAAATAAGCTCCGACTAACATGCCGGCGAAAACAAC
JMSF044A14+           ACAGTTATCAGCAACGATGCCCCAGAAATAAGCTTCGACTAACATGCCGGCGAAAACAAC
                      ____________________________________________________________
consensus             ACAGTTATCAGCAACGATGCCCCAGAAATAAGCTCCGACTAACATGCCGGCGAAAACAAC
 
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JMFF039F13+           AGTGGTGATGAGACTTTCCTGGGCAGATGAAAGTCCCCAGACGGACTTCACGGAGGGGCC
JMFF021H07+           AGTGGTGATGAGACTTTCCTGGGCAGATGAAAGTCCCCAGACGGACTTCACGGAGGGGCC
JMSF044A14+           AGTGGTGATGAGACTTTCCTGGGCAGATGAAAGTCCCCAGACGGACTTCACGGAGGGGCC
                      ____________________________________________________________
consensus             AGTGGTGATGAGACTTTCCTGGGCAGATGAAAGTCCCCAGACGGACTTCACGGAGGGGCC
 
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JMFF039F13+           AATGAAGGAGAGGATCATCACCTCCATTGCGTCCACCACCGCACCGAGCCCCGCATAAGC
JMFF021H07+           AATGAAGGAGAGGATCATCACCTCCATTGCGTCCACCACCGCACCGAGCCCCGCATAAGC
JMSF044A14+           AATGAAGGAGAGGATCATCACCTCCATTGCGTCCACCACCGCACCGAGCCCCGCATAAGC
                      ____________________________________________________________
consensus             AATGAAGGAGAGGATCATCACCTCCATTGCGTCCACCACCGCACCGAGCCCCGCATAAGC
 
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JMFF039F13+           AAGCACCAAGAACTGAAATTTCCCGAACCCGGCCGCCGACAGTGCTTCATCCACCGTGTA
JMFF021H07+           AAGCACCAAGAACTGAAATTTCCCGAACCCGGCCGCCGACAGTGCTTCATCCACCGTGTA
JMSF044A14+           AAGCACCAAGAACTGAAATTTCCCGAACCCGGCCGCCGACAGTGCTTCATCCACCGTGTA
                      ____________________________________________________________
consensus             AAGCACCAAGAACTGAAATTTCCCGAACCCGGCCGCCGACAGTGCTTCATCCACCGTGTA
 
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JMFF039F13+           ATAAGCTCCATTGTCTTCAACATCCTGAGAGTAATCAAGCTATGACACCTCTTCCTCATC
JMFF021H07+           ATAAGCTCCATTGTCTTCAACATCCTGAGAGTAATCAAGCTGTGACACCTCTTCCTCATC
JMSF044A14+           ATAAGCTCCATTGTCTTCAACATCCTGAGAGTAATCAAGCTGTGACACCTCTTCCTCATC
                      ____________________________________________________________
consensus             ATAAGCTCCATTGTCTTCAACATCCTGAGAGTAATCAAGCTGTGACACCTCTTCCTCATC
 
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JMFF039F13+           AATCATGGTTGGTCTTTCTGTCAGGCAATTAACCGAATACCAAC                
JMFF021H07+           AATCATGGTTGGTCTTTCTGTCAGGCAATTAACCGAATACCAAC                
JMSF044A14+           AATCATGGTTGGTCTTTCTGTCAGGCAATTAACCGAATACCAACAAGGCACGAACTCCAC
                      ____________________________________________________________
consensus             AATCATGGTTGGTCTTTCTGTCAGGCAATTAACCGAATACCAACAAGGCACGAACTCCAC
 
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JMSF044A14+           AAACCAGTCCAAGAAAACTGAAAACTAACTTGCCTTTCCGCCCATCCCCCTCCAAACACC
                      ____________________________________________________________
consensus             AAACCAGTCCAAGAAAACTGAAAACTAACTTGCCTTTCCGCCCATCCCCCTCCAAACACC