Contig 012135:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042B10Sequence780012135 (2)ref|XP_004248211.1|2e-161PREDICTED: protein MEI2-like 2 [Solanum lycopersicum] ref|XP_010327098.1| PREDIC
JMSF042N06Sequence102005087 (2)568012135 (2)ref|XP_006360001.1|3e-77PREDICTED: protein MEI2-like 2-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042N06+ AATTGAGGACCAGANAGCGTTCCAATTCCAGATGGNTGAT
                      ____________________________________________________________
consensus AATTGAGGACCAGANAGCGTTCCAATTCCAGATGGNTGAT
 
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rJMSF042N06+ TTACATGGCTAACCCGTCCGGGCTCTTTACCAATGGGTGTAATCTTCACCGGGTTTGAGA
                      ____________________________________________________________
consensus TTACATGGCTAACCCGTCCGGGCTCTTTACCAATGGGTGTAATCTTCACCGGGTTTGAGA
 
. : . : . : . : . : . :
rJMSF042N06+ GGTGGGCGGGAAGGATCGAGGCAAGCCCCGACATATGACTGCTGTTTACAGGGCTAAGAT
                      ____________________________________________________________
consensus GGTGGGCGGGAAGGATCGAGGCAAGCCCCGACATATGACTGCTGTTTACAGGGCTAAGAT
 
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rJMSF042N06+ TTCTCAAACCCGGAGATNGACTGTAATTATGCAACGGANTCGGCTCGACCGGACTGCCAA
                      ____________________________________________________________
consensus TTCTCAAACCCGGAGATNGACTGTAATTATGCAACGGANTCGGCTCGACCGGACTGCCAA
 
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rJMSF042N06+ AATTTGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
JMSF042B10+ AATTNGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
                      ____________________________________________________________
consensus AATTTGGCCAGCTGCCTGGCGGAGAATTGGCAATCGGTGAACCAACTGAATTCCTAAATG
 
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rJMSF042N06+ TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGNTGTNGCNTCAAGTTTNGACGGGCTC
JMSF042B10+ TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGTTGTTGCATCAAGTTTCGACGGGCTC
                      ____________________________________________________________
consensus TTCGAACATCATCATGTTCCAGCTCTAGGCTCAGTTGTTGCATCAAGTTTCGACGGGCTC
 
. : . : . : . : . : . :
rJMSF042N06+ CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCNTNTTTAAAG
JMSF042B10+ CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCCTATTTAAAG
                      ____________________________________________________________
consensus CGCCGGGCCGACTAGGTTCGAGCTTTATCCGCTTCCCAGCAATGTCGCTCCTATTTAAAG
 
. : . : . : . : . : . :
rJMSF042N06+ CTNTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAANTCAATGAACTTATGGNGTCGCT
JMSF042B10+ CTTTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAACTCAATGAACTTATGGTGTCGCT
                      ____________________________________________________________
consensus CTTTAAGAGCTGCCTCAGCAGCTCTAACGTCATAAAACTCAATGAACTTATGGTGTCGCT
 
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rJMSF042N06+ TATGTGGTGTCTCCCTNATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
JMSF042B10+ TATGTGGTGTCTCCCTTATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
                      ____________________________________________________________
consensus TATGTGGTGTCTCCCTTATCTCTTTGACTTCCCCATAAGTCCCAAATATTTGACGAATGT
 
. : . : . : . : . : . :
rJMSF042N06+ CTTCATTAGATACCGAAGGATCCAAATTGAACACAA
JMSF042B10+ CTTCATTAGATACCGAAGGATCCAAATTGAACACAACAAGTGTTCCTTGGTTAATGTCTT
                      ____________________________________________________________
consensus CTTCATTAGATACCGAAGGATCCAAATTGAACACAACAAGTGTTCCTTGGTTAATGTCTT
 
. : . : . : . : . : . :
JMSF042B10+ TCTCCGATGGATTTTCCTTTGGGATTGAAAAATGAATATCAAGTTTTCTTCGCCGTAAAG
                      ____________________________________________________________
consensus TCTCCGATGGATTTTCCTTTGGGATTGAAAAATGAATATCAAGTTTTCTTCGCCGTAAAG
 
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JMSF042B10+ GCTTATTTTGCAGAGCACGCATCGCAGTTCGAGCAGCTCGGATATCATAGTAAGATATCA
                      ____________________________________________________________
consensus GCTTATTTTGCAGAGCACGCATCGCAGTTCGAGCAGCTCGGATATCATAGTAAGATATCA
 
. : . : . : . : . : . :
JMSF042B10+ TCACAAATCCTCGGTGCTTGCATGCAGTATATAAGGTTCTGATATCGCCATATTGCTCGA
                      ____________________________________________________________
consensus TCACAAATCCTCGGTGCTTGCATGCAGTATATAAGGTTCTGATATCGCCATATTGCTCGA
 
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JMSF042B10+ ATAGAGATTTTAATTCGCTGTCTTCTACATTGCTGTTAATATTTCTAACAAACAATGTCC
                      ____________________________________________________________
consensus ATAGAGATTTTAATTCGCTGTCTTCTACATTGCTGTTAATATTTCTAACAAACAATGTCC
 
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JMSF042B10+ TCGAAGGGTGCTCTCCGTACGGGTGTTCCCCAGCAACTGTTCCTGCACCGTTTGAATAGC
                      ____________________________________________________________
consensus TCGAAGGGTGCTCTCCGTACGGGTGTTCCCCAGCAACTGTTCCTGCACCGTTTGAATAGC
 
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JMSF042B10+ CATAATGTGCAATACTGCTTCCAGGAGACATACTTAACTTGGCAAAGCCGTTAAATAGAT
                      ____________________________________________________________
consensus CATAATGTGCAATACTGCTTCCAGGAGACATACTTAACTTGGCAAAGCCGTTAAATAGAT
 
. : . : . : . : . : . :
JMSF042B10+ TCTCTTGGGACTCGGGTTCCATTTCAAATCCTCCCCCGCCAAATAGATCGTCCTCTAACT
                      ____________________________________________________________
consensus TCTCTTGGGACTCGGGTTCCATTTCAAATCCTCCCCCGCCAAATAGATCGTCCTCTAACT