Contig 012128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044F12Sequence635012128 (6)ref|XP_006355864.1|292PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]604012128 (6)emb|CDP03608.1|9e-18unnamed protein product [Coffea canephora]
JMSF029F10Sequence585012128 (6)ref|XP_006355864.1|291PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]789012128 (6)ref|XP_009594395.1|2e-57PREDICTED: uncharacterized protein LOC104090905 isoform X1 [Nicotiana tomentosi
JMSF041H04Sequence810012128 (6)ref|XP_006355864.1|295PREDICTED: uncharacterized protein LOC102606119 [Solanum tuberosum]565012128 (6)emb|CDP03608.1|2e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF044F12- CATTCTTGCAATGCAAGTTGCAACTTCAATACTGAAATCCATATACTAACAGTATA
                      ____________________________________________________________
consensus CATTCTTGCAATGCAAGTTGCAACTTCAATACTGAAATCCATATACTAACAGTATA
 
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rJMFF044F12- AATATTTGTTTAGCCATTGTAATAAAACTATAAACAGAAACAACAGAGCTAGCTTGCAGC
rJMSF041H04- ACAGAAACAACAGAGCTAGCTTGCAGC
rJMSF029F10- GTAATAAAACGATAAACAGAAACAACAGAGCTAGCTTGCAGC
                      ____________________________________________________________
consensus AATATTTGTTTAGCCATTGTAATAAAACTATAAACAGAAACAACAGAGCTAGCTTGCAGC
 
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rJMFF044F12- TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
rJMSF041H04- TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
rJMSF029F10- TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
                      ____________________________________________________________
consensus TAGCTGAAGAAAACAAGAAAATCTAACATGTCTTCATTATTTACATAATCCATTACTGCC
 
. : . : . : . : . : . :
rJMFF044F12- ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
rJMSF041H04- ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
rJMSF029F10- ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
                      ____________________________________________________________
consensus ATCCTTGACTCTCCCTATTTCACATGGAAACAAGAAATTTCCAGGAATTAAAGCTAGTCA
 
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rJMFF044F12- ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
rJMSF041H04- ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
rJMSF029F10- ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
                      ____________________________________________________________
consensus ATGCATTATTAGTACACTGCATTGGTTACAGAAATAAAGATACTGGTAACACTTTTGTGT
 
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rJMFF044F12- CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
rJMSF041H04- CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
rJMSF029F10- CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
                      ____________________________________________________________
consensus CTAAATCAAGAAAAACTTAATGCACGGTTAACTAATGTTACAAGAGAGGGACCCAGTGGA
 
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rJMFF044F12- GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
rJMSF041H04- GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
rJMSF029F10- GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
                      ____________________________________________________________
consensus GCCTAATCACCAAATCCCTTCTTTCGACATTTTCAGAAAGTTGCAGAGGGTAATGTTCGG
 
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rJMFF044F12- TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
rJMSF041H04- TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
rJMSF029F10- TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
                      ____________________________________________________________
consensus TAGTTCACTATAACCCGCCTTCTTCTTCTTTATCTTTGTGATCTTCACCGCCCCCGTCCC
 
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rJMFF044F12- AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
rJMSF041H04- AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
rJMSF029F10- AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
JMSF041H04+ CGAGATCAAGTTGTAGTACTCACAAACACC
                      ____________________________________________________________
consensus AGTCCCTTTTGTTTGTGTGACAACCGTCACCGAGATCAAGTTGTAGTACTCACAAACACC
 
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rJMFF044F12- ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA
rJMSF041H04- ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
rJMSF029F10- ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
JMSF041H04+ ATGCAATANCAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCANTCAC
                      ____________________________________________________________
consensus ATGCAATAACAAACGATGGAAAGGATCTTGAACAGAAAGGTCCAGCACATCCCCA-TCAC
 
. : . : . : . : . : . :
rJMSF041H04- CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGA
rJMSF029F10- CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMFF044F12+ GATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMSF029F10+ TCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
JMSF041H04+ CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
                      ____________________________________________________________
consensus CACTATCTTTGATAAAAGTTCGAAGACATTCCTCATAATTATTGATGAGTTCTGGAAGAA
 
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rJMSF029F10- AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMFF044F12+ AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMSF029F10+ AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
JMSF041H04+ AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
                      ____________________________________________________________
consensus AGTTACGGCGAAGTGCCTCTCTTGTTCGACAATCCACTCTATGCCATGCGGTTAATACTG
 
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rJMSF029F10- CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMFF044F12+ CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMSF029F10+ CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
JMSF041H04+ CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
                      ____________________________________________________________
consensus CAGCCTTATCATTATTAATAGTGCAACTTTTCCGCTTTGACACTGAACTTTCAAGGGCCT
 
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rJMSF029F10- TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGT-CCACTCTCCAAGAT
JMFF044F12+ TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
JMSF029F10+ TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
JMSF041H04+ TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
                      ____________________________________________________________
consensus TCATCATGGTAGCCTCTTTATCCATGTCAATGTTCCTGAACTTGTCCCACTCTCCAAGAT
 
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rJMSF029F10- TTGTCATGCAA
JMFF044F12+ TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
JMSF029F10+ TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
JMSF041H04+ TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
                      ____________________________________________________________
consensus TTGTCATGCAAAATGGTGAGAGAGGCACATCATCACCAAAAGGTGGCGGAGCAAACAACC
 
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JMFF044F12+ CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
JMSF029F10+ CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
JMSF041H04+ CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
                      ____________________________________________________________
consensus CTCTAATTTCTTCAGCATTCAAGCGAGGAACCAATTCCATCAGTAGACGGTCATTCAACC
 
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JMFF044F12+ ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
JMSF029F10+ ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
JMSF041H04+ ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
                      ____________________________________________________________
consensus ATCTGCGAGATCTTCGGTTGCTGACTTTTCCAGCCAAGTTTTCAAGTAACTCAATCTTCT
 
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JMFF044F12+ TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
JMSF029F10+ TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
JMSF041H04+ TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
                      ____________________________________________________________
consensus TCTCAATAGCAAACCCTCGGGACTTCACATTTTCTCCTTTGGGATTGTCAAAGAGGGTCG
 
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JMFF044F12+ AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
JMSF029F10+ AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
JMSF041H04+ AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
                      ____________________________________________________________
consensus AGAAGATGAGATCTTCTCTCTGCAAGACTTCAGGGGTCGCCATGCTTGTTTGAATTTTGA
 
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JMFF044F12+ CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
JMSF029F10+ CTTCT
JMSF041H04+ CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
                      ____________________________________________________________
consensus CTTCTGAGGAGAATAAAGATTGTCTCTTTAGAATCAGGTGAGACAGATCGGAAGAGGAAA
 
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JMFF044F12+ GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGT
JMSF041H04+ GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGTAGCGAAGAAGATGGC
                      ____________________________________________________________
consensus GCAAGAGAGAAAATGGTGGTTGAATGTCAGAGGAAGAAGATGCGTAGCGAAGAAGATGGC
 
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JMSF041H04+ AGCCAAACAGGACCTTAAATTGCAAGACTAGCAGCAAATGCAGAAGAATATGCCGTGAAC
                      ____________________________________________________________
consensus AGCCAAACAGGACCTTAAATTGCAAGACTAGCAGCAAATGCAGAAGAATATGCCGTGAAC