Contig 012113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018C18Sequence529012113 (3)ref|XP_006351637.1|3e-52PREDICTED: probable fructokinase-4-like [Solanum tuberosum]759013682 (3)ref|XP_009757358.1|1e-69PREDICTED: fructokinase-1 [Nicotiana sylvestris]
JMSF038B17Sequence722012113 (3)ref|XP_006351637.1|6e-58PREDICTED: probable fructokinase-4-like [Solanum tuberosum]872013682 (3)ref|XP_009757358.1|1e-88PREDICTED: fructokinase-1 [Nicotiana sylvestris]
JMSF039L03Sequence680012113 (3)ref|XP_006351637.1|1e-49PREDICTED: probable fructokinase-4-like [Solanum tuberosum]867013682 (3)ref|XP_009757358.1|3e-82PREDICTED: fructokinase-1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF038B17+ CGGTTC
                      ____________________________________________________________
consensus CGGTTC
 
. : . : . : . : . : . :
JMFF018C18+ TGAAGCACATCTGAGAGGAAACGTCCATA
JMSF038B17+ ATTCATCCCAACCATACTGATTCCTTCACTATGAAGCACATCTGAGAGGAAACGTCCATA
JMSF039L03+ TCTGAGAGGAAACGTCCATA
                      ____________________________________________________________
consensus ATTCATCCCAACCATACTGATTCCTTCACTATGAAGCACATCTGAGAGGAAACGTCCATA
 
. : . : . : . : . : . :
JMFF018C18+ GACATCATTGCCAACATGACCAATTGTAGTACAGCAAAGCCCAAGTCTCGCTGCTGCTAT
JMSF038B17+ GACATCATTGCCAACATGACCAATTGTAGTACAGCAAAGCCCAAGTCTCGCTGCTGCTAT
JMSF039L03+ GACATCATTGCCAACATGACCAATTGTAGTACAGCAAAGCCCAAGTCTCGCTGCTGCTAT
                      ____________________________________________________________
consensus GACATCATTGCCAACATGACCAATTGTAGTACAGCAAAGCCCAAGTCTCGCTGCTGCTAT
 
. : . : . : . : . : . :
JMFF018C18+ TGCTACATTGCTGTTGCCACCAGCTTCCCAGTATTCCTTATCCGGTGGAGTTTTGGACAG
JMSF038B17+ TGCTACATTGCTGTTGCCACCAGCTTCCCAGTATTCCTTATCCGGTGGAGTTTTGGACAG
JMSF039L03+ TGCTACATTGCTGTTGCCACCAGCTTCCCAGTATTCCTTATCCGGTGGAGTTTTGGACAG
                      ____________________________________________________________
consensus TGCTACATTGCTGTTGCCACCAGCTTCCCAGTATTCCTTATCCGGTGGAGTTTTGGACAG
 
. : . : . : . : . : . :
JMFF018C18+ CTCATCCATGTAAGCCTTGCGCTGGTCACGGGGCTTGGGGGGCAGTTTAGGGACATTGAG
JMSF038B17+ CTCATCCATGTAAGCCTTGCGCTGGTCACGGGGCTTGGGGGGCAGTTTAGGGACATTGAG
JMSF039L03+ CTCATCCATGTAAGCCTTGCGCTGGTCACGGGGCTTGGGGGGCAGTTTAGGGACATTGAG
                      ____________________________________________________________
consensus CTCATCCATGTAAGCCTTGCGCTGGTCACGGGGCTTGGGGGGCAGTTTAGGGACATTGAG
 
. : . : . : . : . : . :
JMFF018C18+ CACAATATCAACGCAGAGGTTCCCGAGCGTCGCGACATCTATGTCCTTAACCCCGACCGC
JMSF038B17+ CACAATATCAACGCAGAGGTTCCCGAGCGTCGCGACATCTATGTCCTTAACCCCGACCGC
JMSF039L03+ CACAATATCAACGCAGAGGTTCCCGAGCGTCGCGACATCTATGTCCTTAACCCCGACCGC
                      ____________________________________________________________
consensus CACAATATCAACGCAGAGGTTCCCGAGCGTCGCGACATCTATGTCCTTAACCCCGACCGC
 
. : . : . : . : . : . :
JMFF018C18+ CCTGAGGCGGCGGTCTTCGCCGGAGCCGTTGGAACGCCGGAGCTTTGTTGCCGGAATTTC
JMSF038B17+ CCTGAGGCGGCGGTCTTCGCCGGAGCCGTTGGAACGCCGGAGCTTTGTTGCCGGAATTTC
JMSF039L03+ CCTGAGGCGGCGGTCTTCGCCGGAGCCGTTGGAACGCCGGAGCTTTGTTGCCGGAATTTC
                      ____________________________________________________________
consensus CCTGAGGCGGCGGTCTTCGCCGGAGCCGTTGGAACGCCGGAGCTTTGTTGCCGGAATTTC
 
. : . : . : . : . : . :
JMFF018C18+ TATCCCCCGGCTATTGAGAACCGAACAACGAGCCCTACTTCTATTGAGCGAGACGGAACG
JMSF038B17+ TATCCCCCGGCTATTGAGAACCGAACAACGAGCCCTACTTCTATTGAGCGAGACGGAACG
JMSF039L03+ TATCCCCCGGCTATTGAGAACCGAACAACGAGCCCTACTTCTATTGAGCGAGACGGAACG
                      ____________________________________________________________
consensus TATCCCCCGGCTATTGAGAACCGAACAACGAGCCCTACTTCTATTGAGCGAGACGGAACG
 
. : . : . : . : . : . :
JMFF018C18+ AATTACAGGCAGTCTAGGGTTTTGAGCAGAGGTCGGGTGTGAGAAAAGGCCATTTGGTGG
JMSF038B17+ AATTACAGGCAGTCTAGGGTTTTGAGCAGAGGTCGGGTGTGAGAAAAGGCCATTTGGTGG
JMSF039L03+ AATTACAGGCAGTCTAGGGTTTTGAGCAGAGGTCGGGTGTGAGAAAAGGCCATTTGGTGG
                      ____________________________________________________________
consensus AATTACAGGCAGTCTAGGGTTTTGAGCAGAGGTCGGGTGTGAGAAAAGGCCATTTGGTGG
 
. : . : . : . : . : . :
JMFF018C18+ AACTAGCGTCGATTTCCCGGTTATAGCTTGATGATGCATTCAGGTAACAAAAACCACAAA
JMSF038B17+ AACTAGCGTCGATTTCCCGGTTATAGCTTGATGATGCATTCAGGTAACAAAAACCACAAA
JMSF039L03+ AACTAGCGTCGATTTCCCGGTTATAGCTTGATGATGCATTCAGGTAACAAAAACCACAAA
                      ____________________________________________________________
consensus AACTAGCGTCGATTTCCCGGTTATAGCTTGATGATGCATTCAGGTAACAAAAACCACAAA
 
. : . : . : . : . : . :
JMFF018C18+ TCACAATCTCAAATTCAACA
JMSF038B17+ TCACAATCTCAAATTCAACAGAGTAACAGTGGAGAAGAGAATGGCGGTGTTATCACGATT
JMSF039L03+ TCACAATCTCAAATTCAACAGAGTAACAGTGGAGAAGAGAATGGCGGTGTTATCACGATT
                      ____________________________________________________________
consensus TCACAATCTCAAATTCAACAGAGTAACAGTGGAGAAGAGAATGGCGGTGTTATCACGATT
 
. : . : . : . : . : . :
JMSF038B17+ GTGAAATGCGCAATCTCTTACGAATCTGAGAATCTTGGAATGGAATTGATTCAATTGAAT
JMSF039L03+ GTGAAATGCGCAATCTCTTACGAATCTGAGAATCTTGGAATGGAATTGATTCAATTGAAT
                      ____________________________________________________________
consensus GTGAAATGCGCAATCTCTTACGAATCTGAGAATCTTGGAATGGAATTGATTCAATTGAAT
 
. : . : . : . : . : . :
JMSF038B17+ GGAAGGTTCATAACTTCTTAGGAATAACCGTAGTCATTCCACTATCCACTCCAA
JMSF039L03+ GGAAGGTTCATAACTTCTTAGGAATAACCGTAGTCATTCCACTATCCACTCCAATGAATC
                      ____________________________________________________________
consensus GGAAGGTTCATAACTTCTTAGGAATAACCGTAGTCATTCCACTATCCACTCCAATGAATC