Contig 012105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS037C03Sequence208012105 (9)
JMFS038H10Sequence597012105 (9)ref|XP_009805047.1|3e-21PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS076D04Sequence627012105 (9)ref|XP_009805047.1|7e-32PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS094E12Sequence614012105 (9)ref|XP_009805047.1|2e-41PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS106E12Sequence627012105 (9)ref|XP_009805047.1|7e-33PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS135G07Sequence632012105 (9)ref|XP_009805047.1|7e-33PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS157H12Sequence514012105 (9)ref|XP_009805047.1|8e-15PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMFS165E06Sequence602012105 (9)ref|XP_009805047.1|3e-37PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p
JMSF038D11Sequence666012105 (9)ref|XP_009805047.1|7e-39PREDICTED: phototropin-2 [Nicotiana sylvestris] ref|XP_009805048.1| PREDICTED: p881003002 (2)ref|XP_006347791.1|2e-136PREDICTED: phototropin-2-like isoform X1 [Solanum tuberosum] ref|XP_006347792.1|

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS094E12+ ACCAGTCATTGCAAAGAA
JMFS165E06+ A
JMSF038D11+ A
                      ____________________________________________________________
consensus ACCAGTCATTGCAAAGAA
 
. : . : . : . : . : . :
JMFS094E12+ GCCAGTGCTGGCGTACACAATAGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
JMFS076D04+ GCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
JMFS106E12+ AGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
JMFS135G07+ TAGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
JMFS165E06+ GCCAGTGCTGGCGTACACAATAGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
JMSF038D11+ GCCAGTGCTGGCGTACACAATAGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
                      ____________________________________________________________
consensus GCCAGTGCTGGCGTACACAATAGGGCAATCAGGCTTAGTAGCATCGGAGACGACGAATGT
 
. : . : . : . : . : . :
JMFS094E12+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMFS076D04+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMFS106E12+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMFS135G07+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMFS165E06+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMFS038H10+ TGCTGCAACGTTGATANAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
JMSF038D11+ CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
                      ____________________________________________________________
consensus CTGCTGCAACGTTGATAAAGCGTCCTTCAGTTCTTGAGAAACGCGAGGCATATCCGATCC
 
. : . : . : . : . : . :
JMFS094E12+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS076D04+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS106E12+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS135G07+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS165E06+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS157H12+ CAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMFS038H10+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
JMSF038D11+ GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
                      ____________________________________________________________
consensus GTGACTTGAAGAATCAGTTGATAACTTCTCCAGTGAGGTTTTCCTCCTGCTCTCTGCTTC
 
. : . : . : . : . : . :
JMFS094E12+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS076D04+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS106E12+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS135G07+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS165E06+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS157H12+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMFS038H10+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
JMSF038D11+ TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
                      ____________________________________________________________
consensus TCCAACTGAATTTTTGGGGAACGCATAGAAGCGACCTTCTTCCACGTCGTCTTTCTTCAT
 
. : . : . : . : . : . :
JMFS094E12+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS076D04+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS106E12+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS135G07+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS165E06+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS157H12+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMFS038H10+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
JMSF038D11+ CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
                      ____________________________________________________________
consensus CACAGTCAATCCCCATTCCGCAGTCCTCTGTGCTATGGTGGCTTCTGTAGGGTCTCCATC
 
. : . : . : . : . : . :
JMFS094E12+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS076D04+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS106E12+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS135G07+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS165E06+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS157H12+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMFS038H10+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
JMSF038D11+ CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
                      ____________________________________________________________
consensus CCCCCCATTAGCCTTCGCGGCGGTTCTAGAGTCGAAAGCCATCCACTTCCCAACTGGCTC
 
. : . : . : . : . : . :
JMFS094E12+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS076D04+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS106E12+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS135G07+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS165E06+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS157H12+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMFS038H10+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
JMSF038D11+ CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
                      ____________________________________________________________
consensus CTTGTTGAGCGTTGAATTCCCAGATGGTCCTTGTCCGAGCACCTGCACATCGATATTCTG
 
. : . : . : . : . : . :
JMFS094E12+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS076D04+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS106E12+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS135G07+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS165E06+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS037C03+ AACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS157H12+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMFS038H10+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
JMSF038D11+ GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
                      ____________________________________________________________
consensus GATCCTGTTACTAACCGCCTCGCCGATTTGGCGCCTCAATTTGGGTTCAAACACTTGGAT
 
. : . : . : . : . : . :
JMFS094E12+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS076D04+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS106E12+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS135G07+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS165E06+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS037C03+ TGATCGTTTAGAAACAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS157H12+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMFS038H10+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
JMSF038D11+ TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
                      ____________________________________________________________
consensus TGATCGTTTAGTAGCAGCACTTGATGACTCCATATATAAATAATATTATATTCACACACT
 
. : . : . : . : . : . :
JMFS094E12+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTAC
JMFS076D04+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMFS106E12+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMFS135G07+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMFS165E06+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMFS037C03+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAACTCAATTCCTGTGCTGATACAGGA
JMFS157H12+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMFS038H10+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
JMSF038D11+ CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
                      ____________________________________________________________
consensus CATATGTATCGCCGCGAAGAATTGGAAACACTTCAATTCAATTCCTGTGCTGCTACTGGA
 
. : . : . : . : . : . :
JMFS076D04+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAACGA
JMFS106E12+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAA
JMFS135G07+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAACGA
JMFS165E06+ C
JMFS037C03+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCA
JMFS157H12+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAA
JMFS038H10+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAACGA
JMSF038D11+ CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAACGAGTGTAGCTC
                      ____________________________________________________________
consensus CACATTAAATCAAGTGATCGAAGTAAACAGTACAGTTCCAAAATGAAACGAGTGTAGCTC