clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF028F18 | Sequence | 484 | 012102 (4) | 654 | 015935 | ref|XP_004249906.1| | 3e-89 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Solanum lycopersicum] | |||
JMFF045L08 | Sequence | 624 | 012102 (4) | ref|XP_004249906.1| | 3e-13 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Solanum lycopersicum] | 555 | 007213 (2) | ref|XP_009621021.1| | 9e-64 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Nicotiana tomentosiform |
JMFS032H04 | Sequence | 429 | 012102 (4) | ref|XP_009761422.1| | 5e-53 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Nicotiana sylvestris] | |||||
JMSF037G14 | Sequence | 638 | 012102 (4) | ref|XP_004249906.1| | 2e-08 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Solanum lycopersicum] | 724 | 021541 | ref|XP_004249906.1| | 5e-85 | PREDICTED: BTB/POZ domain-containing protein At2g13690 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFS032H04+ TAGTCAAAGTTTGAGAATTTGATGAGTT
____________________________________________________________
consensus TAGTCAAAGTTTGAGAATTTGATGAGTT
. : . : . : . : . : . :
JMFS032H04+ GTCTTCAGTATACAGCCTGCCCAAGATGTCTCTGGTGGTTACATCATCAAACTTGACCCT
____________________________________________________________
consensus GTCTTCAGTATACAGCCTGCCCAAGATGTCTCTGGTGGTTACATCATCAAACTTGACCCT
. : . : . : . : . : . :
JMFS032H04+ ACCAAATAAGCTCCTCAGTTTCTCCTCTTCCTCTTCAGTCCAAGGCATGGCTTCTATGTA
____________________________________________________________
consensus ACCAAATAAGCTCCTCAGTTTCTCCTCTTCCTCTTCAGTCCAAGGCATGGCTTCTATGTA
. : . : . : . : . : . :
JMFS032H04+ CTTTAAACATGACAAAATTCCCCTCACAAATTTAATGCCAGCTGAAACCTCCAGCACATC
____________________________________________________________
consensus CTTTAAACATGACAAAATTCCCCTCACAAATTTAATGCCAGCTGAAACCTCCAGCACATC
. : . : . : . : . : . :
JMFS032H04+ AATGGCGCGGCAAACCCCCATTCTGAGGAGTGCTCTAGGGATATCTTCCTCGAACATAAG
____________________________________________________________
consensus AATGGCGCGGCAAACCCCCATTCTGAGGAGTGCTCTAGGGATATCTTCCTCGAACATAAG
. : . : . : . : . : . :
JMFS032H04+ CTCAATTGTCTGACGGAAAACGCCCAAATTATCCACATCCGGGACCTCAATCCGGCACAA
JMFF045L08+ CAA
____________________________________________________________
consensus CTCAATTGTCTGACGGAAAACGCCCAAATTATCCACATCCGGGACCTCAATCCGGCACAA
. : . : . : . : . : . :
JMFS032H04+ ACCCCTAGACTTTTTCCGATAATCCGCAATCAAGTCGGCAAATACCAAGCTATTAGCAGC
JMFF045L08+ ACCCCTAGACTTTTTCCGATAATCCGCAATCAAGTCGGCAAATACCAAGCTATTAGCAGC
JMSF037G14+ TCCGCAATCAAGTCGGCAAATACCAAGCTATTAGCAGC
____________________________________________________________
consensus ACCCCTAGACTTTTTCCGATAATCCGCAATCAAGTCGGCAAATACCAAGCTATTAGCAGC
. : . : . : . : . : . :
JMFS032H04+ GAGAGCCTCGGCGGAGAGCTCCAGCACCAAGGCACCCCCAT
JMFF045L08+ GAGAGCCTCGGCGGAGAGCTCCAGCACCAAGGCACCCCCATCACTCCCCTTGAGACTCAA
JMSF037G14+ GAGAGCCTCGGCGGAGAGCTCCAGCACCAAGGCACCCCCATTACTCCCCTTGAGACTCAA
____________________________________________________________
consensus GAGAGCCTCGGCGGAGAGCTCCAGCACCAAGGCACCCCCATTACTCCCCTTGAGACTCAA
. : . : . : . : . : . :
JMFF045L08+ CCTCGCGTCGAAGATTCCCTCGGGACCGCACTCCTCCTCCGTCACGGCGCTAGCATTAGA
JMFF028F18+ TCGGGACCGCACTCCTCCTCCGTCACGGCGCTAGCATTAGA
JMSF037G14+ CCTCGCGTCGAAGATTCCCTCGGGACCGCACTCCTCCTCCGTCACGGCGCTAGCATTAGA
____________________________________________________________
consensus CCTCGCGTCGAAGATTCCCTCGGGACCGCACTCCTCCTCCGTCACGGCGCTAGCATTAGA
. : . : . : . : . : . :
JMFF045L08+ GCCCTCGCGGCGGAGCGGCGAGGGCGACGCAGGAAGCTCAGCAGCGGAGCGGGAGGAATG
JMFF028F18+ GCCCTCGCGGCGGAGCGGCGAGGGCGACGCAGGAAGCTCAGCAGCGGAGCGGGAGGAATG
JMSF037G14+ GCCCTCGCGGCGGAGCGGCGAGGGCGACGCAGGAAGCTCAGCAGCGGAGCGGGAGGAATG
____________________________________________________________
consensus GCCCTCGCGGCGGAGCGGCGAGGGCGACGCAGGAAGCTCAGCAGCGGAGCGGGAGGAATG
. : . : . : . : . : . :
JMFF045L08+ CAGGTGGAGCGGCAGAGGATTGGGGGGAGCTAGGGTTTCGTCGATAGGAGACACCCGGCC
JMFF028F18+ CAGGTGGAGCGGCAGAGGATTGGGGGGAGCTAGGGTTTCGTCGATAGGAGACACCCGGCC
JMSF037G14+ CAGGTGGAGCGGCAGAGGATTGGGGGGAGCTAGGGTTTCGTCGATAGGAGACACCCGGCC
____________________________________________________________
consensus CAGGTGGAGCGGCAGAGGATTGGGGGGAGCTAGGGTTTCGTCGATAGGAGACACCCGGCC
. : . : . : . : . : . :
JMFF045L08+ CGGGGAAAGGATCCGGCGAGTAGTCCGAGTAACAAGAGTGTTAGTGTTGGATTTGCAAGA
JMFF028F18+ CGGGGAAAGGATCCGGCGAGTAGTCCGAGTAACAAGAGTGTTAGTGTTGGATTTGCAAGA
JMSF037G14+ CGGGGAAAGGATCCGGCGAGTAGTCCGAGTAACAAGAGTGTTAGTGTTGGATTTGCAAGA
____________________________________________________________
consensus CGGGGAAAGGATCCGGCGAGTAGTCCGAGTAACAAGAGTGTTAGTGTTGGATTTGCAAGA
. : . : . : . : . : . :
JMFF045L08+ GAGAGGGGAGGCGGGGAAGGAATGGGAAATGGAAGATGGGGATTTGGTCTTCTGAGAAAA
JMFF028F18+ GAGAGGGGAGGCGGGGAAGGAATGGGAAATGGAAGATGGGGATTTGGTCTTCTGAGAAAA
JMSF037G14+ GAGAGGGGAGGCGGGGAAGGAATGGGAAATGGAAGATGGGGATTTGGTCTTCTGAGAAAA
____________________________________________________________
consensus GAGAGGGGAGGCGGGGAAGGAATGGGAAATGGAAGATGGGGATTTGGTCTTCTGAGAAAA
. : . : . : . : . : . :
JMFF045L08+ AGCAGCTGAAGTAGTAGTGGGATTGTCGGGGCTGTGAGGCGGCTCGGCGAAGCAGCACCA
JMFF028F18+ AGCAGCTGAAGTAGTAGTGGGATTGTCGGGGCTGTGAGGCGGCTCGGCGAAGCAGCACCA
JMSF037G14+ AGCAGCTGAAGTAGTAGTGGGATTGTCGGGGCTGTGAGGCGGCTCGGCGAAGCAGCACCA
____________________________________________________________
consensus AGCAGCTGAAGTAGTAGTGGGATTGTCGGGGCTGTGAGGCGGCTCGGCGAAGCAGCACCA
. : . : . : . : . : . :
JMFF045L08+ GGAGCGGCGGGGCTTGGGCGGCGGCGGGTCACGGCGGCGGTTGGGTTTGAGGCGCGTGGA
JMFF028F18+ GGAGCGGCGGGGCTTGGGCGGCGGCGGGTCACGGCGGCGGTTGGGTTTGAGGCGCGTGGA
JMSF037G14+ GGAGCGGCGGGGCTTGGGCGGCGGCGGGTCACGGCGGCGGTTGGGTTTGAGGCGCGTGGA
____________________________________________________________
consensus GGAGCGGCGGGGCTTGGGCGGCGGCGGGTCACGGCGGCGGTTGGGTTTGAGGCGCGTGGA
. : . : . : . : . : . :
JMFF045L08+ GTGAGACATTTGTACAAAGAAGCTAAAGCTATGGCGAAAGAGACAACAAACGGAAGAAAG
JMFF028F18+ GTGAGACATTTGTACAAAGAAGCTAAAGCTATGGCGAAAGAGACAACAAACGGAAGAAAG
JMSF037G14+ GTGAGACATTTGTACAAAGAAGCTAAAGCTATGGCGAAAGAGACAACAAACGGAAGAAAG
____________________________________________________________
consensus GTGAGACATTTGTACAAAGAAGCTAAAGCTATGGCGAAAGAGACAACAAACGGAAGAAAG
. : . : . : . : . : . :
JMFF045L08+ AAGAGAGAGCGAGGAGGAAGA
JMFF028F18+ AAGAGAGAGCGAGGAGGAAGA
JMSF037G14+ AAGAGAGAGCGAGGAGGAAGAAGAGGGAGAAACGTTAAGCAATTAGCAGAGAATTATATC
____________________________________________________________
consensus AAGAGAGAGCGAGGAGGAAGAAGAGGGAGAAACGTTAAGCAATTAGCAGAGAATTATATC