| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002G06 | Sequence | 414 | 012100 (6) | ref|XP_010917239.1| | 2e-20 | PREDICTED: protein bem46-like [Elaeis guineensis] | 736 | 012100 (6) | ref|XP_010324017.1| | 5e-95 | PREDICTED: protein bem46 isoform X2 [Solanum lycopersicum] |
| JMSF017D15 | Sequence | 474 | 012100 (6) | ref|XP_002514075.1| | 6e-38 | Protein bem46, putative [Ricinus communis] gb|EEF48029.1| Protein bem46, putativ | 794 | 012100 (6) | ref|XP_010324017.1| | 1e-109 | PREDICTED: protein bem46 isoform X2 [Solanum lycopersicum] |
| JMSF036I14 | Sequence | 606 | 012100 (6) | ref|XP_009621406.1| | 2e-28 | PREDICTED: protein bem46 [Nicotiana tomentosiformis] | 692 | 012100 (6) | ref|XP_010324017.1| | 3e-84 | PREDICTED: protein bem46 isoform X2 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF036I14- AAGGAATGTTGATGTTCAGACTGAATTCCCTTATGCTA
rJMSF002G06- ATGTTGATGTTCAGACTGAATTCCCTTATGCTA
rJMSF017D15- ATGTTGATGTTCAGACTGAATTCCCTTATGCTA
____________________________________________________________
consensus AAGGAATGTTGATGTTCAGACTGAATTCCCTTATGCTA
. : . : . : . : . : . :
rJMSF036I14- TCTATCATTACATGTGTATTGTATAACTATAACAATAAAATTAAGAAAGATATGGTATCA
rJMSF002G06- TCTATCATTACATGTGTATTGTATAACTATAACAATAAAATTAAGAAAGATATGGTATCA
rJMSF017D15- TCTATCATTACATGTGTATTGTATAACTATAACAATAAAATTAAGAAAGATATGGTATCA
____________________________________________________________
consensus TCTATCATTACATGTGTATTGTATAACTATAACAATAAAATTAAGAAAGATATGGTATCA
. : . : . : . : . : . :
rJMSF036I14- TATATTTTAACATTGGACAATCCACATCTTGCCTTGCCACTGGAAATTTGCACTGAATGT
rJMSF002G06- TATATTTTAACATTGGACAATCCACATCTTGCCTTGCCACTGGAAATTTGCACTGAATGT
rJMSF017D15- TATATTTTAACATTGGACAATCCACATCTTGCCTTGCCACTGGAAATTTGCACTGAATGT
____________________________________________________________
consensus TATATTTTAACATTGGACAATCCACATCTTGCCTTGCCACTGGAAATTTGCACTGAATGT
. : . : . : . : . : . :
rJMSF036I14- TTCCGGGACAAAAAAAGTTGAGAGCTCCGCGGTCCATCGGTCGCAATCACACAGAACATT
rJMSF002G06- TTCCGGGACAAAAAAAGTTGAGAGCTCCGCGGTCCATCGGTCGCAATCACACAGAACATT
rJMSF017D15- TTCCGGGACAAAAAAAGTTGAGAGCTCCGCGGTCCATCGGTCGCAATCACACAGAACATT
____________________________________________________________
consensus TTCCGGGACAAAAAAAGTTGAGAGCTCCGCGGTCCATCGGTCGCAATCACACAGAACATT
. : . : . : . : . : . :
rJMSF036I14- TCGCCACGTTGCTCTTGTGGTACTCTTCCCCTTGTAGTTCATGATCCTTCTTCTCCGGAA
rJMSF002G06- TCGCCACGTTGCTCTTGTGGTACTCTTCCCCTTGTAGTTCATGATCCTTCTTCTCCGGAA
rJMSF017D15- TCGCCACGTTGCTCTTGTGGTACTCTTCCCCTTGTAGTTCATGATCCTTCTTCTCCGGAA
____________________________________________________________
consensus TCGCCACGTTGCTCTTGTGGTACTCTTCCCCTTGTAGTTCATGATCCTTCTTCTCCGGAA
. : . : . : . : . : . :
rJMSF036I14- CAGTTTGTTCCATAAACTGCTGAATTGCTCTCCAATATTTATCACCACCAGCCAACCATG
rJMSF002G06- CAGTTTGTTCCATAAACTGCTGAATTGCTCTCCAATATTTATCACCACCAGCCAACCATG
rJMSF017D15- CAGTTTGTTCCATAAACTGCTGAATTGCTCTCCAATATTTATCACCACCAGCCAACCATG
____________________________________________________________
consensus CAGTTTGTTCCATAAACTGCTGAATTGCTCTCCAATATTTATCACCACCAGCCAACCATG
. : . : . : . : . : . :
rJMSF036I14- TATCCATGTGCATTGCGGTCGGAAACTCCACAAATAAGCATTGCCTATTGCATGCAGCTG
rJMSF002G06- TATCCATGTGCATTGCGGTCGGAAACTCCACAAATAAGCATTGCCTATTGCATGCAGCTG
rJMSF017D15- TATCCATGTGCATTGCGGTCGGAAACTCCACAAATAAGCATTGCCTATTGCATGCAGCTG
____________________________________________________________
consensus TATCCATGTGCATTGCGGTCGGAAACTCCACAAATAAGCATTGCCTATTGCATGCAGCTG
. : . : . : . : . : . :
rJMSF036I14- CCCTGGAATATAGCATCTCCATGTGGGATGGGGGAACCAATTCATCTTGTAAACCAGAGA
rJMSF002G06- CCCTGGAATATAGCATCTCCATGTGGGATGGGGGAACCAATTCATCTTGTAAACCAGAGA
rJMSF017D15- CCCTGGAATATAGCATCTCCATGTGGGATGGGGGAACCAATTCATCTTGTAAACCAGAGA
____________________________________________________________
consensus CCCTGGAATATAGCATCTCCATGTGGGATGGGGGAACCAATTCATCTTGTAAACCAGAGA
. : . : . : . : . : . :
rJMSF036I14- GGAAAAGGATTGGTTGTTTGATCTGGCCAACAACATCAATGGTATTCCATGGAGATCTAA
rJMSF002G06- GGAAAAGGATTGGTTGTTTGATCTGGCCAACAACATCAATGGTATTCCATGGAGATCTAA
rJMSF017D15- GGAAAAGGATTGGTTGTTTGATCTGGCCAACAACATCAATGGTATTCCATGGAGATCTAA
____________________________________________________________
consensus GGAAAAGGATTGGTTGTTTGATCTGGCCAACAACATCAATGGTATTCCATGGAGATCTAA
. : . : . : . : . : . :
rJMSF036I14- CCAGAAAATTAAGAAGTTTGAGTCCCTTTGAATCACTTCCTCCAATAAACCACTTCAAGA
rJMSF002G06- CCAGAAAATTAAGAAGTTTGAGTCCCTTTGAATCACTTCCTCCAATAAACCACTTCAAGA
rJMSF017D15- CCAGAAAATTAAGAAGTTTGAGTCCCTTTGAATCACTTCCTCCAATAAACCACTTCAAGA
____________________________________________________________
consensus CCAGAAAATTAAGAAGTTTGAGTCCCTTTGAATCACTTCCTCCAATAAACCACTTCAAGA
. : . : . : . : . : . :
rJMSF036I14- ACGGCACAAGAACTCCGGCCATGTCAAGGATAGAGGTAAAAGTATTCTCCAAAATCAGTG
rJMSF002G06- ACGGCACAAGAACTCCGGCCATGTCAAGGATAGAGGTAAAAGTATTCTCCAAAATCAGTG
rJMSF017D15- ACGGCACAAGAACTCCGGCCATGTCAAGGATAGAGGTAAAAGTATTCTCCAAAATCAGTG
____________________________________________________________
consensus ACGGCACAAGAACTCCGGCCATGTCAAGGATAGAGGTAAAAGTATTCTCCAAAATCAGTG
. : . : . : . : . : . :
rJMSF036I14- CTGAGACCTTATCAGGATTATTTTTGGCAAGTACAGAACCAACTGCTCCTCCTA
rJMSF002G06- CTGAGACCTTATCAGGATTATTTTTGGCAAGTACAGAACCAACTGCTCCTCCTAGTGATC
rJMSF017D15- CTGAGACCTTATCAGGATTATTTTTGGCAAGTACAGAACCAACTGCTCCTCCTAGTGATC
JMSF036I14+ GTGATC
____________________________________________________________
consensus CTGAGACCTTATCAGGATTATTTTTGGCAAGTACAGAACCAACTGCTCCTCCTAGTGATC
. : . : . : . : . : . :
rJMSF002G06- TTCCAAAACCTACTATTCTAGACGTGTCAATATCTGTCCT
rJMSF017D15- TTCCAAAAACTACTATTCTAGACGTGTCAATATCTGTCCTCTGAATCAGATGATCTATTG
JMSF036I14+ TTCCAAAAACTACTATTCTAGACGTGTCAATATCTGTCCTCTGAATCAGATGATCTATTG
____________________________________________________________
consensus TTCCAAAAACTACTATTCTAGACGTGTCAATATCTGTCCTCTGAATCAGATGATCTATTG
. : . : . : . : . : . :
rJMSF017D15- CTGC
JMSF036I14+ CTGCCTATTCAAAAAGAAAACATAATCTCTTAGAACTCAACCTGAAAGGTATAGTTGAAT
____________________________________________________________
consensus CTGCCTATTCAAAAAGAAAACATAATCTCTTAGAACTCAACCTGAAAGGTATAGTTGAAT
. : . : . : . : . : . :
JMSF036I14+ CTGTCTGGCATGAAAATTATGGTAGCAATCAATACTTGAGCATCCTTTGTAATTCCATGC
____________________________________________________________
consensus CTGTCTGGCATGAAAATTATGGTAGCAATCAATACTTGAGCATCCTTTGTAATTCCATGC
. : . : . : . : . : . :
JMSF017D15+ CTGGGCGGTGGGAAAAAAACTTGATGAACC
JMSF002G06+ CTGGGCGGTGGGAAAAAAACTTGATGAACC
JMSF036I14+ TGAGAAGGGTATCCACCACTGGCACCATAGCTGGGCGGTGGGAAAAAAACTTGATGAACC
____________________________________________________________
consensus TGAGAAGGGTATCCACCACTGGCACCATAGCTGGGCGGTGGGAAAAAAACTTGATGAACC
. : . : . : . : . : . :
JMSF017D15+ AGGCATGGAGGTGGACGCCGTCGGAAGATCTGAGCCAGACGTCTTCGTAGGGGAGGCGGA
JMSF002G06+ AGGCATGGAGGTGGACGCCGTCGGAAGATCTGAGCCAGACGTCTTCGTAGGGGAGGCGGA
JMSF036I14+ AGGCATGGAGGTGGACGCCGTCGGAAGATCTGAGCCAGACGTCTTCGTAGGGGAGGCGGA
____________________________________________________________
consensus AGGCATGGAGGTGGACGCCGTCGGAAGATCTGAGCCAGACGTCTTCGTAGGGGAGGCGGA
. : . : . : . : . : . :
JMSF017D15+ GGCGAGCAGGCGTTATGTGATAGGACTTGGGGACGCCAGGCAACACCGGCTCGTAGACAA
JMSF002G06+ GGCGAGCAGGCGTTATGTGATAGGACTTGGGGACGCCAGGCAACACCGGCTCGTAGACAA
JMSF036I14+ GGCGAGCAGGCGTTATGTGATAGGACTTGGGGACGCCAGGCAACACCGGCTCGTAGACAA
____________________________________________________________
consensus GGCGAGCAGGCGTTATGTGATAGGACTTGGGGACGCCAGGCAACACCGGCTCGTAGACAA
. : . : . : . : . : . :
JMSF017D15+ GCCTATCTTGGAACGCCACCAGCAATGCCATCACCGCCAGCACCGTCGCTGCCACGCCGT
JMSF002G06+ GCCTATCTTGGAACGCCACCAGCAATGCCATCACCGCCAGCACCGTCGCTGCCACGCCGT
JMSF036I14+ GCCTATCTTGGAACGCCACCAGCAATGCCATCACCGCCAGCACCGTCGCTGCCACGCCGT
____________________________________________________________
consensus GCCTATCTTGGAACGCCACCAGCAATGCCATCACCGCCAGCACCGTCGCTGCCACGCCGT
. : . : . : . : . : . :
JMSF017D15+ ACAGCATCCAGGTCAAGTACAACTCCAGCATTCTCCCTCTCCGAGTAGATGCGCACGCGC
JMSF002G06+ ACAGCATCCAGGTCAAGTACAACTCCAGCATTCTCCCTCTCCGAGTAGATGCGCACGCGC
JMSF036I14+ ACAGCATCCAGGTCAAGTACAACTCCAGCATTCTCCCTCTCCGAGTAGATGCGCACGCGC
____________________________________________________________
consensus ACAGCATCCAGGTCAAGTACAACTCCAGCATTCTCCCTCTCCGAGTAGATGCGCACGCGC
. : . : . : . : . : . :
JMSF017D15+ ATGTGCGATCACATACGTCTTACATGTATATGCAAATTCAAATTCAAATTCAAATGCAAA
JMSF002G06+ ATGTGCGATCACATACGTCTTACATGTATATGCAAATTCAAATTCAAATTCAAATGCAAA
JMSF036I14+ ATGTGCGATCACATACGTCTTACATGTATATGCAAATTCAAATTCAAATTCAAATGCAAA
____________________________________________________________
consensus ATGTGCGATCACATACGTCTTACATGTATATGCAAATTCAAATTCAAATTCAAATGCAAA
. : . : . : . : . : . :
JMSF017D15+ TGCAATCTTCCTCTCTCTTTTCTCTTAGCCGGAGCCTGGAAGCACAAGTCCGGTAC
JMSF002G06+ TGCAATCTTCCTCTCTCTTTTCTCTTAGCCGGAGCCTGGAAGCACAAGTCCGGTAC
JMSF036I14+ TGCAATCTTCCTCTCTCTTTTCTCTTAGCCGGAGCCTGGAAGCACAAGTCCGGTACACCC
____________________________________________________________
consensus TGCAATCTTCCTCTCTCTTTTCTCTTAGCCGGAGCCTGGAAGCACAAGTCCGGTACACCC