Contig 012096: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF041J07- AGCTTGCTACATCATTATATGAAAACGTACAAAGAAA
rJMSF035J12- CTCATCCTATTAACACTTTCTCCAGCTTGCTACATCATTATATGAAAACGTACAAAGAAA
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consensus CTCATCCTATTAACACTTTCTCCAGCTTGCTACATCATTATATGAAAACGTACAAAGAAA
. : . : . : . : . : . :
rJMSF041J07- AGGAATAAGGAAAAGTGAATACAGCAACGAACACAACAATTTCAAAACATAAAAATAAAA
rJMSF035J12- AGGAATAAGGAAAAGTGAATACAGCAACGAACACAACAATTTCAAAACATAAAAATAAAA
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consensus AGGAATAAGGAAAAGTGAATACAGCAACGAACACAACAATTTCAAAACATAAAAATAAAA
. : . : . : . : . : . :
rJMSF041J07- AACTGGGCCAAATAGAACTTGCCTTAATGTTCCTAATAGAGTAAAAACTAGGAAGTAATC
rJMSF035J12- AACTGGGCCAAATAGAACTTGCCTTAATGTTCCTAATAGAGTAAAAACTAGGAAGTAATC
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consensus AACTGGGCCAAATAGAACTTGCCTTAATGTTCCTAATAGAGTAAAAACTAGGAAGTAATC
. : . : . : . : . : . :
rJMSF041J07- CTGACAAAAGAAGCTTTCAAGAACTGGCTTTCATTTTCAATCTGTAGCAGCAAGAGCTGA
rJMSF035J12- CTGACAAAAGAAGCTTTCAAGAACTGGCTTTCATTTTCAATCTGTAGCAGCAAGAGCTGA
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consensus CTGACAAAAGAAGCTTTCAAGAACTGGCTTTCATTTTCAATCTGTAGCAGCAAGAGCTGA
. : . : . : . : . : . :
rJMSF041J07- CTGCAACACATCTTCAAGGTACTTCTCAGCATCACCATACTGCCTTTTCTTCTCCTCAAT
rJMSF035J12- CTGCAACACATCTTCAAGGTACTTCTCAGCATCACCATACTGCCTTTTCTTCTCCTCAAT
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consensus CTGCAACACATCTTCAAGGTACTTCTCAGCATCACCATACTGCCTTTTCTTCTCCTCAAT
. : . : . : . : . : . :
rJMSF041J07- TGCCAATGCAGCCAAGGCTTTATCCGGAGGCAGGTCTTGGTAGCTTCTCAAAGTATCAAG
rJMSF035J12- TGCCAATGCAGCCAAGGCTTTATCCGGAGGCAGGTCTTGGTAGCTTCTCAAAGTATCAAG
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consensus TGCCAATGCAGCCAAGGCTTTATCCGGAGGCAGGTCTTGGTAGCTTCTCAAAGTATCAAG
. : . : . : . : . : . :
rJMSF041J07- AATAGGTTTTGTTTTGTTCTCCAAATCCTTTCTGTGCTCCGCCATTTCAACCAGCACTCC
rJMSF035J12- AATAGGTTTTGTTTTGTTCTCCAAATCCTTTCTGTGCTCCGCCATTTCAACCAGCACTCC
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consensus AATAGGTTTTGTTTTGTTCTCCAAATCCTTTCTGTGCTCCGCCATTTCAACCAGCACTCC
. : . : . : . : . : . :
rJMSF041J07- ATGACTTATCTCTGGGGTATAGCCAACACGGTTGAGCATTGCCTTGTAATTAGAATACTG
rJMSF035J12- ATGACTTATCTCTGGGGTATAGCCAACACGGTTGAGCATTGCCTTGTAATTAGAATACTG
JMSF041J07+ TGGGGTATAGCCAACACGGTTGAGCATTGCCTTGTAATTAGAATACTG
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consensus ATGACTTATCTCTGGGGTATAGCCAACACGGTTGAGCATTGCCTTGTAATTAGAATACTG
. : . : . : . : . : . :
rJMSF041J07- TTGAAAATATTGCCTCTCTTTGGAATCCATAATTGTCAGGTTCGTTTTCCAATTTTCCAT
rJMSF035J12- TTGAAAATTTTGCCTCTCTTTGGAATCCATAATTGTCAGGTTCGTTTTCCAATTTTCCAT
JMSF041J07+ TTGAAAATATTGCCTCTCTTTGGAATCCATAATTGTCAGGTTCGTTTTCCAATTTTCCAT
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consensus TTGAAAATATTGCCTCTCTTTGGAATCCATAATTGTCAGGTTCGTTTTCCAATTTTCCAT
. : . : . : . : . : . :
rJMSF041J07- TTGTGCTTCACAAGGAGCAATGTCATCTTCAAGCTGAGCAAGCGTTCTTTTCAAGTAAGT
rJMSF035J12- TTGTGCTTCACAAGGAGCAATGTCATCTTCAAGCTGAGCAAGCGTTCTTTTCAAGTAAGT
JMSF041J07+ TTGTGCTTCACAAGGAGCAATGTCATCTTCAAGCTGAGCAAGCGTTCTTTTCAAGTAAGT
JMSF035J12+ GTAAGT
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consensus TTGTGCTTCACAAGGAGCAATGTCATCTTCAAGCTGAGCAAGCGTTCTTTTCAAGTAAGT
. : . : . : . : . : . :
rJMSF041J07- CAATCTTGCTATTGCCTTCCGAGTGTAATCAAGAA
rJMSF035J12- CAATCTTGCTATTGCCTTCCGAGTGTAATCAAGAAGAACTTTAGATTCCTGTTGCACTTT
JMSF041J07+ CAATCTTGCTATTGCCTTCCGAGTGTAATCAAGAAGAACTTTAGATTCCTGTTGCACTTT
JMSF035J12+ CAATCTTGCTATTGCCTTCCGAGTGTAATCAAGAAGAACTTTAGATTCCTGTTGCACTTT
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consensus CAATCTTGCTATTGCCTTCCGAGTGTAATCAAGAAGAACTTTAGATTCCTGTTGCACTTT
. : . : . : . : . : . :
rJMSF035J12- AGCCCTCTTCTCTTCTACTGCTGTTTTCCTAAGAGAAAGATCTGCCATTGCTACAAGAAA
JMSF041J07+ AGCCCTCTTCTCTTCTACTGCTGTTTTCCTAAGAGAAAGATCTGCCATTGCTACAAGAAA
JMSF035J12+ AGCCCTCTTCTCTTCTACTGCTGTTTTCCTAAGAGAAAGATCTGCCATTGCTACAAGAAA
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consensus AGCCCTCTTCTCTTCTACTGCTGTTTTCCTAAGAGAAAGATCTGCCATTGCTACAAGAAA
. : . : . : . : . : . :
rJMSF035J12- GCTACTCAATTCAGTG
JMSF041J07+ GCTACTCAATTCAGTGTCTCTAATATTCAACAAATTCGCCATACTGGCAAGCACTTGTGC
JMSF035J12+ GCTACTCAATTCAGTGTCTCTAATATTCAACAAATTCGCCATACTGGCAAGCACTTGTGC
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consensus GCTACTCAATTCAGTGTCTCTAATATTCAACAAATTCGCCATACTGGCAAGCACTTGTGC
. : . : . : . : . : . :
JMSF041J07+ AGATGAAACCACATTCGGCGTCAAACTCTCTTGGGCCAATCCCACATTTTCTAATACCTC
JMSF035J12+ AGATGAAACCACATTCGGCGTCAAACTCTCTTGGGCCAATCCCACATTTTCTAATACCTC
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consensus AGATGAAACCACATTCGGCGTCAAACTCTCTTGGGCCAATCCCACATTTTCTAATACCTC
. : . : . : . : . : . :
JMSF041J07+ TCTTATCCTCGCAGCTTGAGACCTATACTCGGCAGCTTTTCGACGGAAATCATTGGCTAC
JMSF035J12+ TCTTATCCTCGCAGCTTGAGACCTATACTCGGCAGCTTTTTGACGGAAATCATTGGCTAC
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consensus TCTTATCCTCGCAGCTTGAGACCTATACTCGGCAGCTTTTTGACGGAAATCATTGGCTAC
. : . : . : . : . : . :
JMSF041J07+ GATCCCTGCGGCTTGATTTTTGGCCTGAGAAATGGTCGCAATATTGTGCAAATGCGCAAC
JMSF035J12+ GATCCCTGCGGCTTGATTTTTGGCCTGAGAAATGGTCGCAATATTGTGCAAATGCGCAAC
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consensus GATCCCTGCGGCTTGATTTTTGGCCTGAGAAATGGTCGCAATATTGTGCAAATGCGCAAC
. : . : . : . : . : . :
JMSF041J07+ GCTTCGTGCAGTGTACTCGAAATCAGGGACGTCCTTCCCAACAGCGTCGAATTGGGAAAC
JMSF035J12+ GCTTCGTGCAGTGTACTCGAAATCAGGGACGTCCTTCCCAACAGCGTCGAATTGGGAAAC
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consensus GCTTCGTGCAGTGTACTCGAAATCAGGGACGTCCTTCCCAACAGCGTCGAATTGGGAAAC
. : . : . : . : . : . :
JMSF041J07+ TAGCCATGATTTTACCTCTGCGATTCGGCTCGCATCTAAAGCACTACTCCCCTTCGTTGT
JMSF035J12+ TAGCCATGATTTTACCTCTGCGATTCGGCTCGCATCTAAAGCACTACTCCCCTTCGTTGT
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consensus TAGCCATGATTTTACCTCTGCGATTCGGCTCGCATCTAAAGCACTACTCCCCTTCGTTGT
. : . : . : . : . : . :
JMSF041J07+ TTCCGTCGATACTGAAGGATCGCTTCCGCCCAACATTTCACTCATCTTGCTAAAATGCAG
JMSF035J12+ TTCCGTCGATACTGAAGGATCGCTTCCGCCCAACATTTCACTCATCTTGCTAAAATGCAG
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consensus TTCCGTCGATACTGAAGGATCGCTTCCGCCCAACATTTCACTCATCTTGCTAAAATGCAG
. : . : . : . : . : . :
JMSF041J07+ ACAGATAAGTTATATGTAATTGCTTAGAAAAAGAAATCACAACGCCGGTCTTCCCCGCAA
JMSF035J12+ ACAGATAAGTTATATGTAATTGCTTAGAAAAAGAAATCACAACGCCGGTCTTCCCCGCAA
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consensus ACAGATAAGTTATATGTAATTGCTTAGAAAAAGAAATCACAACGCCGGTCTTCCCCGCAA
. : . : . : . : . : . :
JMSF041J07+ AAACTTCAATTTTCTTTCTGTTCGATCGCCGGCGAAGCTGAGGGTCGAGTGTC
JMSF035J12+ AAACTTCAATTTTCTTTCTGTTCGATCGCCGGCGAAGCTGAGGGTCGAGTGTCTACTTCC
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consensus AAACTTCAATTTTCTTTCTGTTCGATCGCCGGCGAAGCTGAGGGTCGAGTGTCTACTTCC