Contig 012095:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017C14Sequence558012095 (8)ref|XP_009600672.1|5e-66PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana tomentosiformis]693006976 (7)ref|XP_009769232.1|6e-88PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF045B03Sequence604012095 (8)ref|XP_009600671.1|1e-64PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana tomentosiformis]496006976 (7)ref|XP_009600671.1|1e-45PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana tomentosiformis]
JMFF045B13Sequence642012095 (8)ref|XP_009789770.1|3e-56PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]595006976 (7)ref|XP_009769232.1|3e-74PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF047D11Sequence638012095 (8)ref|XP_009600672.1|2e-68PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana tomentosiformis]626006976 (7)ref|XP_009769232.1|9e-52PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF049E07Sequence548012095 (8)ref|XP_009789770.1|8e-38PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]549006976 (7)ref|XP_009769232.1|2e-70PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFF051J15Sequence612012095 (8)ref|XP_009789770.1|3e-52PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]600006976 (7)ref|XP_009769232.1|2e-51PREDICTED: protein HOTHEAD-like isoform X1 [Nicotiana sylvestris]
JMFS078G07Sequence625012095 (8)ref|XP_009789770.1|4e-52PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]
JMSF035J01Sequence658012095 (8)ref|XP_009789770.1|6e-54PREDICTED: protein HOTHEAD-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045B03+ ACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
JMFF017C14+ ACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
JMFF047D11+ AACTATCTGCTTCTCTACCCATGGGTAGGATTCATTCACCAGCTNTGCATCCC
JMFF045B13+ C
                      ____________________________________________________________
consensus AACTATCTGCTTCTCTACCCATGGGTAGGATTCATTCACCAGCTTTGCATCCC
 
. : . : . : . : . : . :
JMFF045B03+ ACCCTGCTTTCTGGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF017C14+ ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF047D11+ ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFF051J15+ CCCTGCTTTCTGNATATAACTGGGGCTAGCTCTAGTGTAGAAGCCGGCGTGNATGCAAG
JMFF045B13+ ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMFS078G07+ TGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
JMSF035J01+ CCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
                      ____________________________________________________________
consensus ACCCTGCTTTCTTGATATAACTTGGGCTAGCTCTAGTGTAGAAGCCGGCGTTGATGCAAG
 
. : . : . : . : . : . :
JMFF045B03+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF017C14+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF047D11+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF051J15+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF045B13+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMFF049E07+ GGCCCGGGAATGAAAGACGCCGTCGGTGGAGACGAAGACCT
JMFS078G07+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
JMSF035J01+ TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGATGAAGACCT
                      ____________________________________________________________
consensus TCCCGCCGCCGAGAACTCTGGCCCGGGAATTGAAGACGCCGTCGGTGGAGACGAAGACCT
 
. : . : . : . : . : . :
JMFF045B03+ GTGAGGCGGACGACGGTGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF017C14+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF047D11+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF051J15+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF045B13+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFF049E07+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMFS078G07+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
JMSF035J01+ GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
                      ____________________________________________________________
consensus GTGAGGCGGACGACGGCGAGGTGTCGGCCAAGGTGATGTGGAAGTTCTCCATGAACGACA
 
. : . : . : . : . : . :
JMFF045B03+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF017C14+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF047D11+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF051J15+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF045B13+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFF049E07+ CGTTGAGTTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMFS078G07+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
JMSF035J01+ CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
                      ____________________________________________________________
consensus CGTTTGAGTTGGCAAACGGCACGCCGCCTCTCTCCAGCAGCAGAACACTGAAGTTCTGCG
 
. : . : . : . : . : . :
JMFF045B03+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF017C14+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF047D11+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF051J15+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF045B13+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFF049E07+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMFS078G07+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
JMSF035J01+ ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
                      ____________________________________________________________
consensus ACAGCGTGGCCGCCAATGGGCACCCCGCCGTGCCGCCGCCCACTATAATGTAATCATAAT
 
. : . : . : . : . : . :
JMFF045B03+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF017C14+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF047D11+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF051J15+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF045B13+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFF049E07+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMFS078G07+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
JMSF035J01+ CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
                      ____________________________________________________________
consensus CCCTGTTCCCGCCGCCACCCACGGCGGCGTTTGACGACGACGATGACGAGGAGGAAGCGG
 
. : . : . : . : . : . :
JMFF045B03+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF017C14+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF047D11+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF051J15+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF045B13+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFF049E07+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMFS078G07+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
JMSF035J01+ CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
                      ____________________________________________________________
consensus CGGCGGAGTACGAGCTGGCATATTTTATGAATGGGTATTTATCATTCCAGAAATAATTAT
 
. : . : . : . : . : . :
JMFF045B03+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF017C14+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF047D11+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF051J15+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF045B13+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFF049E07+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMFS078G07+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
JMSF035J01+ TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
                      ____________________________________________________________
consensus TATTCTCTCTCCCTCGGCAAGAAGTGATGGCGCATAGAAGCGAGGAGACCAGAAGAAGTA
 
. : . : . : . : . : . :
JMFF045B03+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF017C14+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCC
JMFF047D11+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF051J15+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF045B13+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFF049E07+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMFS078G07+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
JMSF035J01+ AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
                      ____________________________________________________________
consensus AAAGAGGATGCCCAACCGCAGCCATGGACGACAGAACCCACAGACAACCTCAGAAAACAC
 
. : . : . : . : . : . :
JMFF045B03+ CAATCTATCTCTCTCTCTTCAAAGTGG
JMFF047D11+ CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTT
JMFF051J15+ CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTT
JMFF045B13+ CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMFF049E07+ CAATCTATCTCTCTCTCTTGTAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMFS078G07+ CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
JMSF035J01+ CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
                      ____________________________________________________________
consensus CAATCTATCTCTCTCTCTTCAAAGTGGCTTACGTTGGTTGGCCTTGTTTTCTCGTGTATC
 
. : . : . : . : . : . :
JMFF045B13+ TAATTTTCATACATATATACACACACC
JMFF049E07+ TAATTTTCATACATATATACACACACC
JMFS078G07+ TAATTTTCATACATATATACACACACCCTCTAATGTT
JMSF035J01+ TAATTTTCATACATATATACACACACCCTCTAATGTTAGTTGAAACTCGAGTTATATACC
                      ____________________________________________________________
consensus TAATTTTCATACATATATACACACACCCTCTAATGTTAGTTGAAACTCGAGTTATATACC