Contig 012094:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027F05Sequence569012094 (4)ref|XP_009629011.1|5e-65PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Nicotiana tomentosifo
JMFS047D12Sequence624012094 (4)ref|XP_009629011.1|5e-82PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Nicotiana tomentosifo
JMFS092C04Sequence625012094 (4)ref|XP_009629011.1|3e-77PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Nicotiana tomentosifo
JMSF035I03Sequence631012094 (4)ref|XP_009629011.1|8e-78PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Nicotiana tomentosifo195013709 (2)

Alignment

This contig is upended


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JMFS047D12+                       TCCCGAATTTGGTACCTAATGTTCACGCCCTTGCTCGCCCATCTTATG
JMFS092C04+                                         ATGTTCACGCCCTTGCTCGCCCATCTTATG
JMSF035I03+                                         ATGTTCACGCCCTTGCTCGCCCATCTTATG
                      ____________________________________________________________
consensus                         TCCCGAATTTGGTACCTAATGTTCACGCCCTTGCTCGCCCATCTTATG
 
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JMFS047D12+           CATTCTTTCTCAATCATATCCTTAATGACAAGATCAGTGGAATCATCAAGGACTTGAATC
JMFS027F05+                                 TAATGACAAGATCAGTGGAATCATCAAGGACTTGAATC
JMFS092C04+           CATTCTTTCTCAATCATATCCTTAATGACAAGATCAGTGGAATCATCAAGGACTTGAATC
JMSF035I03+           CATTCTTTCTCAATCATATCCTTAATGACAAGATCAGTGGAATCATCAAGGACTTGAATC
                      ____________________________________________________________
consensus             CATTCTTTCTCAATCATATCCTTAATGACAAGATCAGTGGAATCATCAAGGACTTGAATC
 
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JMFS047D12+           ACAATTCGATCGGACGGCCAGGAGAGGTTACATGCAGCTCCAATGGAGATCTTGTAAACC
JMFS027F05+           ACAATTCGATCGGACGGCCAGGAGAGGTTACATGCAGCTCCAATGGAGATCTTGTAAACC
JMFS092C04+           ACAATTCGATCGGACGGCCAGGAGAGGTTACATGCAGCTCCAATGGAGATCTTGTAAACC
JMSF035I03+           ACAATTCGATCGGACGGCCAGGAGAGGTTACATGCAGCTCCAATGGAGATCTTGTAAACC
                      ____________________________________________________________
consensus             ACAATTCGATCGGACGGCCAGGAGAGGTTACATGCAGCTCCAATGGAGATCTTGTAAACC
 
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JMFS047D12+           TCTTTCTCGTTGAACATGGGGATTTGGATGAGGACCATAGGGTACGAGGCATTGCCGGAC
JMFS027F05+           TCTTTCTCGTTGAACATGGGGATTTGGATGAGGACCATAGGGTACGAGGCATTGCCGGAC
JMFS092C04+           TCTTTCTCGTTGAACATGGGGATTTGGATGAGGACCATAGGGTACGAGGCATTGCCGGAC
JMSF035I03+           TCTTTCTCGTTGAACATGGGGATTTGGATGAGGACCATAGGGTACGAGGCATTGCCGGAC
                      ____________________________________________________________
consensus             TCTTTCTCGTTGAACATGGGGATTTGGATGAGGACCATAGGGTACGAGGCATTGCCGGAC
 
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JMFS047D12+           TCCAAATCGTCGCGCATTGCCTCCCATTTGTACCGTTTATCCGGTTTCTTAAAGAAAATC
JMFS027F05+           TCCAAATCGTCGCGCATTGCCTCCCATTTGTACCGTTTATCCGGTTTCTTAAAGAAAATC
JMFS092C04+           TCCAAATCGTCGCGCATTGCCTCCCATTTGTACCGTTTATCCGGTTTCTTAAAGAAAATC
JMSF035I03+           TCCAAATCGTCGCGCATTGCCTCCCATTTGTACCGTTTATCCGGTTTCTTAAAGAAAATC
                      ____________________________________________________________
consensus             TCCAAATCGTCGCGCATTGCCTCCCATTTGTACCGTTTATCCGGTTTCTTAAAGAAAATC
 
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JMFS047D12+           TTAACCAGAATAATCACAATCCCCATGTAAAGCCGCTCGAAGAACAACATAAGCGACATG
JMFS027F05+           TTAACCAGAATAATCACAATCCCCATGTAAAGCCGCTCGAAGAACAACATAAGCGACATG
JMFS092C04+           TTAACCAGAATAATCACAATCCCCATGTAAAGCCGCTCGAAGAACAACATAAGCGACATG
JMSF035I03+           TTAACCAGAATAATCACAATCCCCATGTAAAGCCGCTCGAAGAACAACATAAGCGACATG
                      ____________________________________________________________
consensus             TTAACCAGAATAATCACAATCCCCATGTAAAGCCGCTCGAAGAACAACATAAGCGACATG
 
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JMFS047D12+           GCGAGGCAGACATAGACGGATAACCTTAACAGAGGGACAATGAGGGGCGCTTTGATGAGT
JMFS027F05+           GCGAGGCAGACATAGACGGATAACCTTAACAGAGGGACAATGAGGGGCGCTTTGATGAGT
JMFS092C04+           GCGAGGCAGACATAGACGGATAACCTTAACAGAGGGACAATGAGGGGCGCTTTGATGAGT
JMSF035I03+           GCGAGGCAGACATAGACGGATAACCTTAACAGAGGGACAATGAGGGGCGCTTTGATGAGT
                      ____________________________________________________________
consensus             GCGAGGCAGACATAGACGGATAACCTTAACAGAGGGACAATGAGGGGCGCTTTGATGAGT
 
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JMFS047D12+           TCCCACATCAGCCCCATCTGCGCCGCTATGTCGGCTGCCGGCCCCCGGAGCGTCTCCGGC
JMFS027F05+           TCCCACATCAGCCCCATCTGCGCCGCTATGTCGGCTGCCGGCCCCCGGAGCGTCTCCGGC
JMFS092C04+           TCCCACATCAGCCCCATCTGCGCCGCTATGTCGGCTGCCGGCCCCCGGAGCGTCTCCGGC
JMSF035I03+           TCCCACATCAGCCCCATCTGCGCCGCTATGTCGGCTGCCGGCCCCCGGAGCGTCTCCGGC
                      ____________________________________________________________
consensus             TCCCACATCAGCCCCATCTGCGCCGCTATGTCGGCTGCCGGCCCCCGGAGCGTCTCCGGC
 
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JMFS047D12+           ATCGATGCCGCCACAATGTTGCCGGAAACCTCCGCCATTCCTCTCCGGCGAGTTGCAGAA
JMFS027F05+           ATCGATGCCGCCACAATGTTGCCGGAAACCTCCGCCATTCCTCTCCGGCGAGTTGCAGAA
JMFS092C04+           ATCGATGCCGCCACAATGTTGCCGGAAACCTCCGCCATTCCTCTCCGGCGAGTTGCAGAA
JMSF035I03+           ATCGATGCCGCCACAATGTTGCCGGAAACCTCCGCCATTCCTCTCCGGCGAGTTGCAGAA
                      ____________________________________________________________
consensus             ATCGATGCCGCCACAATGTTGCCGGAAACCTCCGCCATTCCTCTCCGGCGAGTTGCAGAA
 
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JMFS047D12+           TTGATCGGAGCAGATCTGCTCTGTTAGTTGAATATATGCGTAGGGTTAAGCTGCGGAGAG
JMFS027F05+           TTGATCGGAGCAGATCTGCTCTGTTAGTTGAATATATGCGTAGGGTTAAGCTGCGGAGAG
JMFS092C04+           TTGATCGGAGCAGATCTGCTCTGTTAGTTGAATATATGCGTAGGGTTAAGCTGCGGAGAG
JMSF035I03+           TTGATCGGAGCAGATCTGCTCTGTTAGTTGAATATATGCGTAGGGTTAAGCTGCGGAGAG
                      ____________________________________________________________
consensus             TTGATCGGAGCAGATCTGCTCTGTTAGTTGAATATATGCGTAGGGTTAAGCTGCGGAGAG
 
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JMFS047D12+           GAAGGAGGAATTCAGATACAGCAGAATTGCGGCATC                        
JMFS027F05+           GAAGGAGGAATTCAGATACAGCAGAATTGCGGCATCGTGGAGGGAGAGAAA         
JMFS092C04+           GAAGGAGGAATTCAGATACAGCAGAATTGCGGCATCGTGGAGGGAGAGAAA         
JMSF035I03+           GAAGGAGGAATTCAGATACAGCAGAATTGCGGCATCGTGGAGGGAGAGAAAGAGAGAGTC
                      ____________________________________________________________
consensus             GAAGGAGGAATTCAGATACAGCAGAATTGCGGCATCGTGGAGGGAGAGAAAGAGAGAGTC