Contig 012093:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035D21Sequence697012093 (2)ref|XP_004253440.1|1e-71PREDICTED: probable inactive receptor kinase At4g23740, partial [Solanum lycope636014132 (2)emb|CDP05105.1|3e-77unnamed protein product [Coffea canephora]
JMSF052A23Sequence702012093 (2)ref|XP_006350601.1|4e-73PREDICTED: probable inactive receptor kinase At4g23740-like isoform X1 [Solanum864014132 (2)emb|CDP05105.1|1e-112unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052A23+ TTCTTTCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
JMSF035D21+ TCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
                      ____________________________________________________________
consensus TTCTTTCTGTGAATAGCAAAGAATCAACAGCACAGCAATTAC
 
. : . : . : . : . : . :
JMSF052A23+ CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
JMSF035D21+ CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
                      ____________________________________________________________
consensus CGCAAACCCTAAAGCACAGCTTCCAATTATGATCCCCAGCAGTGCAGGTTCACTAAGGCT
 
. : . : . : . : . : . :
JMSF052A23+ TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
JMSF035D21+ TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
                      ____________________________________________________________
consensus TTTGGACTTCTTGCTCAGCGGAGCATCAGGAGGAAGAACAGAGGGAACGGGAGGTAAAGA
 
. : . : . : . : . : . :
JMSF052A23+ GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
JMSF035D21+ GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
                      ____________________________________________________________
consensus GATCACCGGAGAAAGATGGTTACCAGCAAAAGCTGAATCAGGGAATCTTCCAAGAGATGG
 
. : . : . : . : . : . :
JMSF052A23+ AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
JMSF035D21+ AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
                      ____________________________________________________________
consensus AGGCAAATTTCCAGTGAGGTTATTGTTGGACAGATCTAATAGCTGCAAGCTAGGGAGGTT
 
. : . : . : . : . : . :
JMSF052A23+ GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
JMSF035D21+ GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
                      ____________________________________________________________
consensus GAGATCAGGAATATCGCCCGAGAGCGAGTTGTTAGCAAGACTCAAAGCTGTCAAATGAGT
 
. : . : . : . : . : . :
JMSF052A23+ CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
JMSF035D21+ CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
                      ____________________________________________________________
consensus CAAGTTCGACATCGAGGAAGGTATGCTCCCATTAAACTCATTATTTGACAAATTCAACAC
 
. : . : . : . : . : . :
JMSF052A23+ TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
JMSF035D21+ TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
                      ____________________________________________________________
consensus TGAAAGGCTTTTCCAAACAGAAAAATCAGCCGGCAGAGGACCATGAAAGCTATTGGACTG
 
. : . : . : . : . : . :
JMSF052A23+ GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
JMSF035D21+ GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
                      ____________________________________________________________
consensus GAGATAGAGCATGGTCAAATTCTCAAGCTTCCAGAAATCAGAAGGGAAAGAACCAGAGAT
 
. : . : . : . : . : . :
JMSF052A23+ CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
JMSF035D21+ CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
                      ____________________________________________________________
consensus CCGATTGGATCTCAGACTCAAAATCTGAAGTCCAGATAAACGGCTCAAGGAATTCAAAGG
 
. : . : . : . : . : . :
JMSF052A23+ AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
JMSF035D21+ AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
                      ____________________________________________________________
consensus AATTGAGCCACGCATTCCAATTCCCGGCAACCTAACCGCTATGATTTTATCCTTATTATG
 
. : . : . : . : . : . :
JMSF052A23+ ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT
JMSF035D21+ ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT
                      ____________________________________________________________
consensus ATTGCAAGTCACTCCAACCCAGCTGCTACAAGCTGAGGTTTGCTCCTTCCAATTCAGCTT