Contig 012086:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037H02Sequence509012086 (4)ref|XP_009592191.1|2e-45PREDICTED: uncharacterized transporter YBR287W-like isoform X1 [Nicotiana tomen698002276 (7)ref|XP_009592449.1|9e-90PREDICTED: uncharacterized transporter YBR287W-like isoform X3 [Nicotiana tomen
JMFF037H13Sequence512012086 (4)ref|XP_009592191.1|5e-68PREDICTED: uncharacterized transporter YBR287W-like isoform X1 [Nicotiana tomen670002276 (7)ref|XP_009592449.1|2e-86PREDICTED: uncharacterized transporter YBR287W-like isoform X3 [Nicotiana tomen
JMFN025A23Sequence620012086 (4)ref|XP_009592191.1|3e-95PREDICTED: uncharacterized transporter YBR287W-like isoform X1 [Nicotiana tomen
JMSF034L21Sequence682012086 (4)ref|XP_009592191.1|2e-40PREDICTED: uncharacterized transporter YBR287W-like isoform X1 [Nicotiana tomen670002276 (7)ref|XP_009592449.1|2e-89PREDICTED: uncharacterized transporter YBR287W-like isoform X3 [Nicotiana tomen

Alignment

This contig is upended


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JMFN025A23+                 AATGATATTGTACACATAGGCCCAGAGATATATAGCTCCTACTGCCAAGGAAAG
                      ____________________________________________________________
consensus                   AATGATATTGTACACATAGGCCCAGAGATATATAGCTCCTACTGCCAAGGAAAG
 
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JMFN025A23+           TGAAGCATAGCTCATTCCATATGTATGACAAGCGTCAGGATCTCCAAATGGGCTGCCTTT
                      ____________________________________________________________
consensus             TGAAGCATAGCTCATTCCATATGTATGACAAGCGTCAGGATCTCCAAATGGGCTGCCTTT
 
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JMFN025A23+           CTCTTTACAAACTGCAGGAATTATAATAAGAAGCATGTTGCCCAAGTTCCCTGCGGCACA
JMFF037H13+            TCTTTACAAACTGCAGGAATTATAATAAGAAGCATGTTGCCCAAGTTCCCTGCGGCACA
JMFF037H02+            TCTTTACAANCTGCAGGAATTATAATAAGAAGCATGTTGCCCAAGTTCCNTGCGGCACA
                      ____________________________________________________________
consensus             CTCTTTACAAACTGCAGGAATTATAATAAGAAGCATGTTGCCCAAGTTCCCTGCGGCACA
 
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JMFN025A23+           ACAGCCCACAATAAGTCCTCGTAGATGTTGGGGAGCTCTTGCAACCTGAACAACAACCCA
JMFF037H13+           ACAGCCCACAATAAGTCCTCGTAGATGTTGGGGAGCTCTTGCAACCTGAACAACAACCCA
JMFF037H02+           ACAGCCCACAATAAGTCCTNGTAGATGTTGGGGAGCTCTTGCAACNTGAACAACAACCCA
                      ____________________________________________________________
consensus             ACAGCCCACAATAAGTCCTCGTAGATGTTGGGGAGCTCTTGCAACCTGAACAACAACCCA
 
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JMFN025A23+           -CCCAAGAATTGAACCAATCACAAATGTGACAAAGATGTTGAGAGGCATGAACCACATTT
JMFF037H13+           -CCCAAGAATTGAACCAATCACAAATGTGACAAAGATGTTGAGAGGCATGAACCACATTT
JMFF037H02+           NCCCAAGAATTGAACCAATCACAAATGTGACAAAGATGTTGAGAGGCATGAACCACATTT
JMSF034L21+            CCCAAGAATTGAACCAATCACAAATGTGACAAAGATGTTGAGAGGCATGAACCACATTT
                      ____________________________________________________________
consensus             -CCCAAGAATTGAACCAATCACAAATGTGACAAAGATGTTGAGAGGCATGAACCACATTT
 
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JMFN025A23+           TCATCATGCTTTCATATGTAATCGAATTGGCCAAGTTGCTGGAGACAAGCGATGGATTGA
JMFF037H13+           TCATCATGCTTTCATATGTAATCGAATTGGCCAAGTTGCTGGAGACAAGCGATGGATTGA
JMFF037H02+           TCATCATGCTTTCATATGTAATCGAATTGGCCAAGTTGCTGGAGACAAGCGATGGATTGA
JMSF034L21+           TCATCATGCTTTCATATGTAATCGAATTGGCCAAGTTGCTGGAGACAAGCGATGGATTGA
                      ____________________________________________________________
consensus             TCATCATGCTTTCATATGTAATCGAATTGGCCAAGTTGCTGGAGACAAGCGATGGATTGA
 
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JMFN025A23+           ATACAAAAAATACAATATTATTTAAATGCTTCCTTGCTTCCTCTCCCAACAAATCATAAC
JMFF037H13+           ATACAAAAAATACAATATTATTTAAATGCTTCCTTGCTTCCTCTCCCAACAAATCATAAC
JMFF037H02+           ATACAAAAAATACAATATTATTTAAATGCTTCCTTGCTTCCTCTCCCAACAAATCATAAC
JMSF034L21+           ATACAAAAAATACAATATTATTTAAATGCTTCCTTGCTTCCTCTCCCAACAAATCATAAC
                      ____________________________________________________________
consensus             ATACAAAAAATACAATATTATTTAAATGCTTCCTTGCTTCCTCTCCCAACAAATCATAAC
 
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JMFN025A23+           GTTCCAGCGCAAGAACTGATCCGAGTCCCGTCACCAGGAGCACTTTGAGGACTGGCATTG
JMFF037H13+           GTTCCAGCGCAAGAACTGATCCGAGTCCCGTCACCAGGAGCACTTTGAGGACTGGCATTG
JMFF037H02+           GTTCCAGCGCAAGAACTGATCCGAGTCCCGTCACCAGGAGCACTTTGAGGACTGGCATTG
JMSF034L21+           GTTCCAGCGCAAGAACTGATCCGAGTCCCGTCACCAGGAGCACTTTGAGGACTGGCATTG
                      ____________________________________________________________
consensus             GTTCCAGCGCAAGAACTGATCCGAGTCCCGTCACCAGGAGCACTTTGAGGACTGGCATTG
 
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JMFN025A23+           ATGCAGCAACGAATAGATCCAAAATAGCCCCCATATCTGGATTCTCTCAGCAAGCTAGCT
JMFF037H13+           ATGCAGCAACGAATAGATCCAAAATAGCCCCCATATCTGGATTCTCTCAGCAAGCTAGCT
JMFF037H02+           ATGCAGCAACGAATAGATCCAAAATAGCCCCCATATCTGGATTCTCTCAGCAAGCTAGCT
JMSF034L21+           ATGCAGCAACGAATAGATCCAAAATAGCCCCCATATCTGGATTCTCTCAGCAAGCTAGCT
                      ____________________________________________________________
consensus             ATGCAGCAACGAATAGATCCAAAATAGCCCCCATATCTGGATTCTCTCAGCAAGCTAGCT
 
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JMFN025A23+           AAATATTTAAATTCTCGTCACAACTGATCCAACTGCTAGCTCCACTCAGCTCAGCTCAGC
JMFF037H13+           AAATATTTAAATTCTCGTCACAACTGATCCAACTGCTAGCTCCACTCAGCTCAGCTCAGC
JMFF037H02+           AAATATTTAAATTCTCGTCACAACTGATCCAACTGCTAGCTCCACTCAGCTCAGCTCAGC
JMSF034L21+           AAATATTTAAATTCTCGTCACAACTGATCCAACTGCTAGCTCCACTCAGCTCAGCTCAGC
                      ____________________________________________________________
consensus             AAATATTTAAATTCTCGTCACAACTGATCCAACTGCTAGCTCCACTCAGCTCAGCTCAGC
 
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JMFN025A23+           TCAGTC                                                      
JMFF037H13+           TCAGTCA                                                     
JMFF037H02+           TCAGTCA                                                     
JMSF034L21+           TCAGTCAGATATCTGATGCATAGTAGCATACAATAGGAAGAACGTCCCAGACAGAAATGC
                      ____________________________________________________________
consensus             TCAGTCAGATATCTGATGCATAGTAGCATACAATAGGAAGAACGTCCCAGACAGAAATGC
 
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JMSF034L21+           GCATATCTTCCAGAAGTGCATGCATATATGAATATTCAGCCGGCGGCGATTCACTCCTTC
                      ____________________________________________________________
consensus             GCATATCTTCCAGAAGTGCATGCATATATGAATATTCAGCCGGCGGCGATTCACTCCTTC
 
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JMSF034L21+           CTCCTCCTCCGCCAGTTTGCACGTCGGAAACTTAAATGTAAATCCGGCGAATATATTGTT
                      ____________________________________________________________
consensus             CTCCTCCTCCGCCAGTTTGCACGTCGGAAACTTAAATGTAAATCCGGCGAATATATTGTT
 
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JMSF034L21+           CAACTACNGACGAATCATGCTCAAATCACACCTTCAATCCTTCTTATTATTGAAGTTTAT
                      ____________________________________________________________
consensus             CAACTACNGACGAATCATGCTCAAATCACACCTTCAATCCTTCTTATTATTGAAGTTTAT
 
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JMSF034L21+           AAGAATAACTTTCTTTGGAAAAAAAGTTTATAAGAATAATATAATGCTAGTTTAATAACC
                      ____________________________________________________________
consensus             AAGAATAACTTTCTTTGGAAAAAAAGTTTATAAGAATAATATAATGCTAGTTTAATAACC