Contig 012084:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031B01Sequence196012084 (2)676005729 (2)gb|AFK39458.1|2e-107unknown [Lotus japonicus]
JMSF034B12Sequence195012084 (2)734005729 (2)emb|CDP00114.1|2e-122unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF031B01+                                                     TNNGGTTTTTTTTTGNTT
JMSF034B12+                                                          TTTTTTTTTGNTT
                      ____________________________________________________________
consensus                                                       TNNGGTTTTTTTTTGNTT
 
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JMSF031B01+           TTTTTTTGTTTTTTTTTTGTTTTTTTTAAAACTGTTTTTGCTACTTTAGCTAAGCTTCGA
JMSF034B12+           TTTTTTTGTTTTTTTTTTGTTTTTTTTAAAACTGTTTTTGCTACTTTAGCTAAGCTTCGA
                      ____________________________________________________________
consensus             TTTTTTTGTTTTTTTTTTGTTTTTTTTAAAACTGTTTTTGCTACTTTAGCTAAGCTTCGA
 
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JMSF031B01+           GAATGAAATGCTTGCGCGAAGAGAATCCGATAACGCCTCTCTCCGGCGAGCGAGAGACGA
JMSF034B12+           GAATGAAATGCTTGCGCGAAGAGAATCCGATAACGCCTCTCTCCGGCGAGCGAGAGACGA
                      ____________________________________________________________
consensus             GAATGAAATGCTTGCGCGAAGAGAATCCGATAACGCCTCTCTCCGGCGAGCGAGAGACGA
 
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JMSF031B01+           GGCGGATCGCGGTGGTGTATAGGCGGAGCGGAGCTGAGTGTTAACGGCTAACTTCTG   
JMSF034B12+           GGCGGATCGCGGTGGTGTATAGGCGGAGCGGAGCTGAGTGTTAACGGCTAACTTCTGAGC
                      ____________________________________________________________
consensus             GGCGGATCGCGGTGGTGTATAGGCGGAGCGGAGCTGAGTGTTAACGGCTAACTTCTGAGC