Contig 012069:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014J07Sequence533012069 (4)ref|XP_009795110.1|6e-82PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris]687006910 (4)emb|CAA68143.1|2e-91cytosol aminopeptidase [Petroselinum crispum]
JMFF038A18Sequence255012069 (4)ref|XP_009795110.1|3e-42PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris]729006910 (4)emb|CAA68143.1|4e-98cytosol aminopeptidase [Petroselinum crispum]
JMSF001F08Sequence293012069 (4)ref|XP_009795110.1|1e-29PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris]719006910 (4)gb|KJB06906.1|4e-107hypothetical protein B456_001G0323001, partial [Gossypium raimondii] gb|KJB06907
JMSF032D04Sequence676012069 (4)ref|XP_009795110.1|4e-84PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris]772006910 (4)emb|CAA68143.1|1e-120cytosol aminopeptidase [Petroselinum crispum]

Alignment

This contig is upended


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JMSF032D04+                                                       TCTTCGAAAATCCCCA
                      ____________________________________________________________
consensus                                                         TCTTCGAAAATCCCCA
 
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JMSF032D04+           GCACAGTTCCGGTTGCTATTGCTGAGGCAGTACTGAGCTTTGATTCCGAAGAGAGGCCTT
                      ____________________________________________________________
consensus             GCACAGTTCCGGTTGCTATTGCTGAGGCAGTACTGAGCTTTGATTCCGAAGAGAGGCCTT
 
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JMFF014J07+                GAAGCAAGTGCAACAGCAATACTACTTGCCTGAGCAGATTTAGCAGCTGCAGCAA
JMSF032D04+           CGGCTGAAGCAAGTGCAACAGCAATACTACTTGCCTGAGCAGATTTAGCAGCTGCAGCAA
                      ____________________________________________________________
consensus             CGGCTGAAGCAAGTGCAACAGCAATACTACTTGCCTGAGCAGATTTAGCAGCTGCAGCAA
 
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JMFF014J07+           TAGTCTCACCGAGAGTACGATAAGCAGTGGTTGAAGAAACTGCTGATCCAAGCCCAACTA
JMSF032D04+           TAGTCTCACCGAGAGTACGATAAGCAGTGGTTGAAGAAACTGCTGATCCAAGCCCAACTA
                      ____________________________________________________________
consensus             TAGTCTCACCGAGAGTACGATAAGCAGTGGTTGAAGAAACTGCTGATCCAAGCCCAACTA
 
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JMFF038A18+                            CCAAGACCAGGAAGTCTAAGAACAGTGGATTGCCCAGATTTCC
JMFF014J07+           ACCCAATCCTTTTAGAACCAAGACCAGGAAGTCTAAGAACAGTGGATTGCCCAGATTTCC
JMSF032D04+           ACCCAATCCTTTTAGAACCAAGACCAGGAAGTCTAAGAACAGTGGATTGCCCAGATTTCC
                      ____________________________________________________________
consensus             ACCCAATCCTTTTAGAACCAAGACCAGGAAGTCTAAGAACAGTGGATTGCCCAGATTTCC
 
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JMFF038A18+           CAGAAAAATCTTCCTCGGAGGAGGCTTCGGACAGCAAACCACCCAATTTTGAATCCAACT
JMFF014J07+           CAGAAAAATCTTCCTCGGAGGAGGCTTCGGACAGCAAACCACCCAATTTTGAATCCAACT
JMSF032D04+           CAGAAAAATCTTCCTCGGAGGAAGCTTCGGACAGCAAACCACCCAATTTTGAATCCAACT
                      ____________________________________________________________
consensus             CAGAAAAATCTTCCTCGGAGGAGGCTTCGGACAGCAAACCACCCAATTTTGAATCCAACT
 
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JMFF038A18+           TTTGCAAGATCAAATTTTGGAACTTGGAATTTTCGTCTTTAACCATGTCCTTCTCTGTTA
JMFF014J07+           TTTGCAAGATCAAATTTTGGAACTTGGAATTTTCGTCTTTAACCATGTCCTTCTCTGTTA
JMSF032D04+           TTTGCAAGATCAAATTTTGGAACTTGGAATTTTCGTCTTTAACCATGTCCTTCTCTGTTA
                      ____________________________________________________________
consensus             TTTGCAAGATCAAATTTTGGAACTTGGAATTTTCGTCTTTAACCATGTCCTTCTCTGTTA
 
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JMFF038A18+           CACCCACTGCAAGGATATCTCCTTTCCATTCAAGCAAATCAACCTCTTTTGCAGCAAATG
JMFF014J07+           CACCCACTGCAAGGATATCTCCTTTCCATTCAAGCAAATCAACCTCTTTTGCAGCAAATG
JMSF001F08+              CCACTGCAAGGATATCTCCTTTCCATTCAAGCAAATCAACNTCTTTTGCAGCAAATG
JMSF032D04+           CACCCACTGCAAGGATATCTCCTTTCCATTCAAGCAAATCAACCTCTTTTGCAGCAAATG
                      ____________________________________________________________
consensus             CACCCACTGCAAGGATATCTCCTTTCCATTCAAGCAAATCAACCTCTTTTGCAGCAAATG
 
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JMFF038A18+           ATATCTTGGGGCGTTCGATTCGATTGGGA                               
JMFF014J07+           ATATCTTGGGGCGTTCGATTTGATTGGGATGAGTGAGGCCAAGAGTGGCCCGAGCTATGG
JMSF001F08+           ATATCTTGGGGCGTTCGATTTGATTGGGATGAGTGAGGCCAAGAGTGGCCCGAGCTATGG
JMSF032D04+           ATATCTTGGGGCGTTCGATTTGATTGGGATGAGTGAGGCCAAGAGTGGCCCGAGCTATGG
                      ____________________________________________________________
consensus             ATATCTTGGGGCGTTCGATTTGATTGGGATGAGTGAGGCCAAGAGTGGCCCGAGCTATGG
 
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JMFF014J07+           AGTGCGCCATACGCCTAGGTCTTCTGCAGCAGAGGGGCGAAACCGAGAAGGAAATAGCCC
JMSF001F08+           AGTGCGCCATACGCCTAGGTCTTCTGCAGCAGAGGGGCGAAACCGAGAAGGAAATAGCCC
JMSF032D04+           AGTGCGCCATACGCCTAGGTCTTCTGCAGCAGAGGGGCGAAACCGAGAAGGAAATAGCCC
                      ____________________________________________________________
consensus             AGTGCGCCATACGCCTAGGTCTTCTGCAGCAGAGGGGCGAAACCGAGAAGGAAATAGCCC
 
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JMFF014J07+           AGGCGGAGGTAGATCGGAATTTCAAGAAAATGGAAGAAGTAGAAGTGGAAGTAGAT    
JMSF001F08+           AGGCGGAGGTAGATCGGAATTTCAAGAAAATGGAAGAAGTAGAAGTGGAAGTAGATGTGG
JMSF032D04+           AGGCGGAGGTAGATCGGAATTTCAAGAAAATGGAAGAAGTAGAAGTGGAAGTAGATGTGG
                      ____________________________________________________________
consensus             AGGCGGAGGTAGATCGGAATTTCAAGAAAATGGAAGAAGTAGAAGTGGAAGTAGATGTGG
 
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JMSF001F08+           AAACGGCAGCGACCGCGATATTAGTAGCCAAAACTGAGGATCTCAAACTCAAAGC     
JMSF032D04+           AAACGGCAGCGACCGCGATATTAGTAGCCAAAACTGAGGATCTCAAACTCAAAGCGGCCC
                      ____________________________________________________________
consensus             AAACGGCAGCGACCGCGATATTAGTAGCCAAAACTGAGGATCTCAAACTCAAAGCGGCCC