| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005I13 | Sequence | 368 | 023684 | ref|XP_006357771.1| | 1e-04 | PREDICTED: calcium-binding protein CML24-like [Solanum tuberosum] | 334 | 012067 (9) | ref|XP_006357771.1| | 1e-04 | PREDICTED: calcium-binding protein CML24-like [Solanum tuberosum] |
| JMFF033P15 | Sequence | 546 | 012067 (9) | ref|XP_009628802.1| | 8e-63 | PREDICTED: probable calcium-binding protein CML18 [Nicotiana tomentosiformis] | 685 | 012067 (9) | ref|XP_009804163.1| | 9e-78 | PREDICTED: calcium-binding protein CML24-like [Nicotiana sylvestris] |
| JMFN009D19 | Sequence | 622 | 012067 (9) | ref|XP_009804163.1| | 6e-79 | PREDICTED: calcium-binding protein CML24-like [Nicotiana sylvestris] | |||||
| JMFN017D12 | Sequence | 610 | 012067 (9) | ref|XP_009804163.1| | 4e-79 | PREDICTED: calcium-binding protein CML24-like [Nicotiana sylvestris] | |||||
| JMFN031E23 | Sequence | 622 | 012067 (9) | ref|XP_009804163.1| | 6e-79 | PREDICTED: calcium-binding protein CML24-like [Nicotiana sylvestris] | |||||
| JMFN031K13 | Sequence | 639 | 012067 (9) | ref|XP_009628802.1| | 7e-79 | PREDICTED: probable calcium-binding protein CML18 [Nicotiana tomentosiformis] | |||||
| JMSF031N02 | Sequence | 665 | 012067 (9) | ref|XP_009804163.1| | 4e-75 | PREDICTED: calcium-binding protein CML24-like [Nicotiana sylvestris] | 652 | 012067 (9) | ref|XP_009628802.1| | 4e-75 | PREDICTED: probable calcium-binding protein CML18 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF033P15- ATTCATGAAATTGGACTT
____________________________________________________________
consensus ATTCATGAAATTGGACTT
. : . : . : . : . : . :
rJMFF005I13- CAGCTT
rJMFF033P15- GGATCGGAATAACCGTAGAAATATTTGGAATAAATCGTAATCCAGTCATATCAACAGCTT
rJMSF031N02- GCTT
JMSF031N02+ CAGCTT
____________________________________________________________
consensus GGATCGGAATAACCGTAGAAATATTTGGAATAAATCGTAATCCAGTCATATCAACAGCTT
. : . : . : . : . : . :
rJMFF005I13- TTGGCCGAAAAAAAAAAGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
rJMFF033P15- TTGGCCGAAAAAAAAAAGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
JMFN031E23+ GTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
JMFN009D19+ AGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
JMFN017D12+ AGTAATACAGCCATGCAATAAGCATCTA
JMFN031K13+ AAAAAAAAAAGTATGAAGTTNGGACAGTAATACAGCCATGCAATAAGCATCTA
rJMSF031N02- TTGGCCGAAAAAAAAAAGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
JMSF031N02+ TNGGCCGAAAAAAAAAAGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATNTA
____________________________________________________________
consensus TTGGCCGAAAAAAAAAAGTATGAAGTTTGGACAGTAATACAGCCATGCAATAAGCATCTA
. : . : . : . : . : . :
rJMFF005I13- ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
rJMFF033P15- ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
JMFN031E23+ ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
JMFN009D19+ ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTTGAAACTCGGCTAAACTGA
JMFN017D12+ ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
JMFN031K13+ ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
rJMSF031N02- ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
JMFF033P15+ TAAACTGA
JMSF031N02+ ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
____________________________________________________________
consensus ATCAGATCAAACTACTTAAATGCTAAACCTACCGTTAATTTCGAAACTCGGCTAAACTGA
. : . : . : . : . : . :
rJMFF005I13- ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
rJMFF033P15- ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
JMFN031E23+ ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
JMFN009D19+ ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
JMFN017D12+ ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
JMFN031K13+ ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
rJMSF031N02- ATGATCAAGGCTCAAGACCTAGCCATCATC-TTTTGAATTCCTCGAAGTTAACGCAGCCG
JMFF033P15+ ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
JMSF031N02+ ATGATCAAGGCTCAAGACCTAGCCATCATC-TTTTGAATTCCTCGAAGTTAACGCAGCCG
____________________________________________________________
consensus ATGATCAAGGCTCAAGACCTAGCCATCATCTTTTTGAATTCCTCGAAGTTAACGCAGCCG
. : . : . : . : . : . :
rJMFF005I13- TCGCC
rJMFF033P15- TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMFN031E23+ TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMFN009D19+ TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMFN017D12+ TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMFN031K13+ TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
rJMSF031N02- TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMFF033P15+ TCGCCGTCGACGTCGACGGAAGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
JMSF031N02+ TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
____________________________________________________________
consensus TCGCCGTCGACGTCGACGG-AGCTAATCATGCGGCGGCAGTCCTTGAGCGAACACTTCTC
. : . : . : . : . : . :
rJMFF033P15- TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMFN031E23+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMFN009D19+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMFN017D12+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMFN031K13+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
rJMSF031N02- TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMFF033P15+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
JMSF031N02+ TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
____________________________________________________________
consensus TCCGAGGCTCTTCATCACCGAGTGAAGCTCGCTGGCGGAGATCTTCCCGTTCTTATCCTT
. : . : . : . : . : . :
rJMFF033P15- GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMFN031E23+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMFN009D19+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMFN017D12+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMFN031K13+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
rJMSF031N02- GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMFF033P15+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
JMSF031N02+ GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
____________________________________________________________
consensus GTCGTACAGGCTGAAGGCGTCGCGGAGGTCCTTGTCCTCGGAGTCGGATCCTCCGTCGCT
. : . : . : . : . : . :
rJMFF033P15- GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMFN031E23+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMFN009D19+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMFN017D12+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMFN031K13+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
rJMSF031N02- GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMFF033P15+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
JMSF031N02+ GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
____________________________________________________________
consensus GGAGCAGTGGAAAGCCGCGAACTCCTCCATATCGATGAATCCGTCGCCGTCAGTATCGAC
. : . : . : . : . : . :
rJMFF033P15- CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMFN031E23+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMFN009D19+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMFN017D12+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMFN031K13+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
rJMSF031N02- CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMFF033P15+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
JMSF031N02+ CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
____________________________________________________________
consensus CTCCAGCATTATGCGCTTCACCTCCTCCGCCGACGTCTTGGAGCCGAGCGCATTCAGAAT
. : . : . : . : . : . :
rJMFF033P15- CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMFN031E23+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMFN009D19+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMFN017D12+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMFN031K13+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
rJMSF031N02- CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMFF033P15+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
JMSF031N02+ CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
____________________________________________________________
consensus CGCTCCGAGCTCCGACAGCGAGATTTTGCCGTCGCCATTCGAGTCAAACTTCCTGAACAC
. : . : . : . : . : . :
rJMFF033P15- CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMFN031E23+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMFN009D19+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMFN017D12+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMFN031K13+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
rJMSF031N02- CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMFF033P15+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
JMSF031N02+ CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
____________________________________________________________
consensus CTTCTCCACTTCCCCCATCGCGCCGCCAGAAATCACCGCCGCTTTCGGATCGCTTCCGCT
. : . : . : . : . : . :
rJMFF033P15- TTTTGCCA
JMFN031E23+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTG
JMFN009D19+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGT
JMFN017D12+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACT
JMFN031K13+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACTTCTG
rJMSF031N02- TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACTTCTG
JMFF033P15+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACTTCTGGGAGACTTT
JMSF031N02+ TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACTTCTGGGAGACTTTTCCC
____________________________________________________________
consensus TTTTGCCATTACAGAGAGAGACTATAATAGGGAAAGTGTGACTTCTGGGAGACTTTTCCC