Contig 012063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031D09Sequence653012063 (4)emb|CDP14265.1|2e-48unnamed protein product [Coffea canephora]709012063 (4)ref|XP_009797293.1|207PREDICTED: uncharacterized protein LOC104243745 [Nicotiana sylvestris]
JMSF052K01Sequence653012063 (4)ref|XP_006358729.1|237PREDICTED: uncharacterized protein LOC102600527 [Solanum tuberosum]928012063 (4)ref|XP_006358729.1|261PREDICTED: uncharacterized protein LOC102600527 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031D09- GGACTTATCAATTTCTCAAATTGTGCCCAATTTAACAAACCTTTTACCTTAAGA
                      ____________________________________________________________
consensus GGACTTATCAATTTCTCAAATTGTGCCCAATTTAACAAACCTTTTACCTTAAGA
 
. : . : . : . : . : . :
rJMSF031D09- AATCAGAGTACATTGATGTCTACAACAATGTAAATATATCGTCATCGTCATCGTCCATCA
rJMSF052K01- GTACATTGATGTCTACAACAATGTAAATATATCGTCATCGTCATCGTCCATCA
                      ____________________________________________________________
consensus AATCAGAGTACATTGATGTCTACAACAATGTAAATATATCGTCATCGTCATCGTCCATCA
 
. : . : . : . : . : . :
rJMSF031D09- CCTGGGAAGCAGACGGACTTAAAAGCCCGTGGGAGTACAAGATTCAATAAGATTGAAACT
rJMSF052K01- CCTGGGAAGCAGACGGACTTAAAAGCCCGTGGGAGTACAAGATTCAATAAGATTGAAACT
                      ____________________________________________________________
consensus CCTGGGAAGCAGACGGACTTAAAAGCCCGTGGGAGTACAAGATTCAATAAGATTGAAACT
 
. : . : . : . : . : . :
rJMSF031D09- GACAGTATCTATTTCTTTATAAGTTGCTGATACAGACAAAGGAGCTTTGAATTTGGAAGG
rJMSF052K01- GACAGTATCTATTTCTTTATAAGTTGCTGATACAGACAAAGGAGCTTTGAATTTGGAAGG
                      ____________________________________________________________
consensus GACAGTATCTATTTCTTTATAAGTTGCTGATACAGACAAAGGAGCTTTGAATTTGGAAGG
 
. : . : . : . : . : . :
rJMSF031D09- TAATGCTAAGAAAATGACGATTTCGACTGCCTCCTATCGCTCCTTAAGTTCCTGCTCAAA
rJMSF052K01- TAATGCTAAGAAAATGACGATTTCGACTGCCTCCTATCGCTCCTTAAGTTCCTGCTCAAA
                      ____________________________________________________________
consensus TAATGCTAAGAAAATGACGATTTCGACTGCCTCCTATCGCTCCTTAAGTTCCTGCTCAAA
 
. : . : . : . : . : . :
rJMSF031D09- TTGAAGTAATTTTTCACGAAGAGGTTGCAGAAACAATCTAAAATCCTGTTTGATCCGCTG
rJMSF052K01- TTGAAGTAATTTTTCACGAAGAGGTTGCAGAAACAATCTAAAATCCTGTTTGATCCGCTG
                      ____________________________________________________________
consensus TTGAAGTAATTTTTCACGAAGAGGTTGCAGAAACAATCTAAAATCCTGTTTGATCCGCTG
 
. : . : . : . : . : . :
rJMSF031D09- CTTATCTTTTGGTTCAAGATCCTTGTCTTCACTTAGACTTGCCTCAATCTGCAAGTCATC
rJMSF052K01- CTTATCTTTTGGTTCAAGATCCTTGTCTTCACTTAGACTTGCCTCAATCTGCAAGTCATC
JMSF052K01+ TTCAAGATCCTTGTCTTCACTTAGACTTGCCTCAATCTGCAAGTCATC
                      ____________________________________________________________
consensus CTTATCTTTTGGTTCAAGATCCTTGTCTTCACTTAGACTTGCCTCAATCTGCAAGTCATC
 
. : . : . : . : . : . :
rJMSF031D09- CAGCTCACCGAACGAGAACTCTGGTATCTCTATATGGCCCTTGACCACCTTCTTCTCAGC
rJMSF052K01- CAGCTCACCGAACGAGAACTCTGGTATCTCTATATGGCCCTTGACCACCTTCTTCTCAGC
JMSF052K01+ CAGCTCACCGAACGAGAACTCTGGTATCTCTATATGGCCCTTGACCACCTTCTTCTCAGC
                      ____________________________________________________________
consensus CAGCTCACCGAACGAGAACTCTGGTATCTCTATATGGCCCTTGACCACCTTCTTCTCAGC
 
. : . : . : . : . : . :
rJMSF031D09- TCCAACAAGCCACTCACCTTTCACCTTTAGTGTTAGCTCATATGTGTAGCCAACACGTTT
rJMSF052K01- TCCAACAAGCCACTCACCTTTCACCTTTAGTGTTAGCTCATATGTGTAGCCAACACGTTT
JMSF052K01+ TCCAACAAGCCACTCACCTTTCACCTTTAGTGTTAGCTCATATGTGTAGCCAACACGTTT
JMSF031D09+ AGCCACTCACCTTTCACCTTTAGTGTTAGCTCATATGTGTAGCCAACACGTTT
                      ____________________________________________________________
consensus TCCAACAAGCCACTCACCTTTCACCTTTAGTGTTAGCTCATATGTGTAGCCAACACGTTT
 
. : . : . : . : . : . :
rJMSF031D09- TTTGTTCCGCACAGTCACCAAGAATGCATCACCGTTACATTTTGTTACTTCTGTTATTTC
rJMSF052K01- TTTGTTCCGCACAGTCACCAAGAATGCATCACCGTTACATTTTGTTACTTCTGTTATTTC
JMSF052K01+ TTTGTTCCGCACAGTCACCAAGAATGCATCACCGTTACATTTTGTTACTTCTGTTATTTC
JMSF031D09+ TTTGTTCCGCACAGTCACCAAGAATGCATCACCGTTACATTTTGTTACTTCTGTTATTTC
                      ____________________________________________________________
consensus TTTGTTCCGCACAGTCACCAAGAATGCATCACCGTTACATTTTGTTACTTCTGTTATTTC
 
. : . : . : . : . : . :
rJMSF031D09- AGCTTTGCCGCCAGACAGTTCCAGAGATCCCACAGATACAAGCAACTCCTTAATCCTATC
rJMSF052K01- AGCTTTGCCGCCAGACAGTTCCAGAGATCCCACAGATACAAGCAACTCCTTAATCCTATC
JMSF052K01+ AGCTTTGCCGCCAGACAGTTCCAGAGATCCCACAGATACAAGCAACTCCTTAATCCTATC
JMSF031D09+ AGCTTTGCCGCCAGACAGTTCCAGAGATCCCACAGATACAAGCAACTCCTTAATCCTATC
                      ____________________________________________________________
consensus AGCTTTGCCGCCAGACAGTTCCAGAGATCCCACAGATACAAGCAACTCCTTAATCCTATC
 
. : . : . : . : . : . :
rJMSF031D09- ATTTGCCCATTTATTTAGACTTTTCTCTTCCCAAGTTCCAGCCCTATTCCAGGCG
rJMSF052K01- ATTTGCCCATTTATTTAGACTTTTCTCTTCCCAAGTTCCAGCCCTATTCCAGGCGGAGCC
JMSF052K01+ ATTTGCCCATTTATTTAGACTTTTCTCTTCCCAAGTTCCAGCCCTATTCCAGGCGGAGCC
JMSF031D09+ ATTTGCCCATTTATTTAGACTTTTCTCTTCCCAAGTTCCAGCCCTATTCCAGGCGGAGCC
                      ____________________________________________________________
consensus ATTTGCCCATTTATTTAGACTTTTCTCTTCCCAAGTTCCAGCCCTATTCCAGGCGGAGCC
 
. : . : . : . : . : . :
rJMSF052K01- AAGATGGGTGGGGGTTTGATTGTTAGGTTGGTCCCCTGGGTTGAGCTTCCGGGGAACCGG
JMSF052K01+ AAGATGGGTGGGGGTTTGATTGTTAGGTTGGTCCCCTGGGTTGAGCTTCCGGGGAACCGG
JMSF031D09+ AAGATGGGTGGGGGTTTGATTGTTAGGTTGGTCCCCTGGGTTGAGCTTCCGGGGAACCGG
                      ____________________________________________________________
consensus AAGATGGGTGGGGGTTTGATTGTTAGGTTGGTCCCCTGGGTTGAGCTTCCGGGGAACCGG
 
. : . : . : . : . : . :
rJMSF052K01- CAGGGGAGCAGCGTCTGCGGTCTTCTCCCTAACCCAGTAGGTGTACGACGGCGCAGTCTC
JMSF052K01+ CAGGGGAGCAGCGTCTGCGGTCTTCTCCCTAACCCAGTAGGTGTACGACGGCGCAGTCTC
JMSF031D09+ CAGGGGAGCAGCGTCTGCGGTCTTCTCCCTAACCCAGTAGGTGTACGACGGCGCAGTCTC
                      ____________________________________________________________
consensus CAGGGGAGCAGCGTCTGCGGTCTTCTCCCTAACCCAGTAGGTGTACGACGGCGCAGTCTC
 
. : . : . : . : . : . :
rJMSF052K01- CTCCTTAGGCTTCTCCTCGGCAGCGGCGGCGGCGGCGGCAGCTGCACTTCCCTCCATTAT
JMSF052K01+ CTCCTTAGGCTTCTCCTCGGCAGCGGCGGCGGCGGCGGCAGCTGCACTTCCCTCCATTAT
JMSF031D09+ CTCCTTAGGCTTCTCCTCGGCAGCGGCGGCGGCGGCGGCAGCTGCACTTCCCTCCATTAT
                      ____________________________________________________________
consensus CTCCTTAGGCTTCTCCTCGGCAGCGGCGGCGGCGGCGGCAGCTGCACTTCCCTCCATTAT
 
. : . : . : . : . : . :
rJMSF052K01- TGTTATTATTACAAATCAAGATCAAGATCAAGAGCTTAAATCTTAATCCTTATCAGCAAT
JMSF052K01+ TGTTATTATTACAAATCAAGATCAAGATCAAGAGCTTAAATCTTAATCCTTATCAGCAAT
JMSF031D09+ TGTTATTATTACAAATCAAGATCAAGATCAAGAGCTTAAATCTTAATCCTTATCAGCAAT
                      ____________________________________________________________
consensus TGTTATTATTACAAATCAAGATCAAGATCAAGAGCTTAAATCTTAATCCTTATCAGCAAT
 
. : . : . : . : . : . :
rJMSF052K01- ATAACGACAACGGATCTCAATGGCACAGCGGAGAA
JMSF052K01+ ATAACGACAACGGATCTCAATGGCACAGCGGAGAATGACGATTT
JMSF031D09+ ATAACGACAACGGATCTCAATGGCACAGCGGAGAATGACGATTTTAGAGCAGAAACGAGA
                      ____________________________________________________________
consensus ATAACGACAACGGATCTCAATGGCACAGCGGAGAATGACGATTTTAGAGCAGAAACGAGA
 
. : . : . : . : . : . :
JMSF031D09+ AACCCAATGGGCTACTTTATACTTCAAGATCAAAACTTCAGTTATTATATAATCAGTACT
                      ____________________________________________________________
consensus AACCCAATGGGCTACTTTATACTTCAAGATCAAAACTTCAGTTATTATATAATCAGTACT
 
. : . : . : . : . : . :
JMSF031D09+ AGAAATGAATATAATATTTTTCCCCTAATTAAATAAATGTTAGGGTTCACCTTTCCCATC
                      ____________________________________________________________
consensus AGAAATGAATATAATATTTTTCCCCTAATTAAATAAATGTTAGGGTTCACCTTTCCCATC