Contig 012048:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF028D03+                                                                CATGAAG
                      ____________________________________________________________
consensus                                                                  CATGAAG
 
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JMSF028D03+           ACTGAATTGCATAATAATAACTCAAGAGTATGTAGAAGTCTTATGGAACAATGACTCAAA
                      ____________________________________________________________
consensus             ACTGAATTGCATAATAATAACTCAAGAGTATGTAGAAGTCTTATGGAACAATGACTCAAA
 
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JMSF028D03+           TAACAGGAAACTTGATTGGTAACAAAACAAAAAGGAAAATCTTAAGAAGATGAATTAACC
                      ____________________________________________________________
consensus             TAACAGGAAACTTGATTGGTAACAAAACAAAAAGGAAAATCTTAAGAAGATGAATTAACC
 
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JMSF028D03+           CACTGCCGTAATCAAAGAAACAAAGGTTGGCAAATTCAATAAAACAAAGAAAAAGCAAAT
                      ____________________________________________________________
consensus             CACTGCCGTAATCAAAGAAACAAAGGTTGGCAAATTCAATAAAACAAAGAAAAAGCAAAT
 
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JMSF028D03+           TAAAGAAATAGGTAAAAATGCTTATGTCAATTCAAATGCTGCTGCCAAGATTTACGAATT
                      ____________________________________________________________
consensus             TAAAGAAATAGGTAAAAATGCTTATGTCAATTCAAATGCTGCTGCCAAGATTTACGAATT
 
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JMSF028D03+           AATTCTAGTAGCTGGACCTTAGTGTGAGGCCGCCGACCACAAAAGTACTGCCAGAAGCAC
                      ____________________________________________________________
consensus             AATTCTAGTAGCTGGACCTTAGTGTGAGGCCGCCGACCACAAAAGTACTGCCAGAAGCAC
 
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JMSF003B02+                                                     ACGCCGAACTGCCAGAAT
JMFF048G17+                                                               GCCAGAAC
JMSF028D03+           AGCTGCTCAGAAAATGACCGCCGATTGGAAGCTGCCGCACCAACGCCGAACTGCCAGAAT
                      ____________________________________________________________
consensus             AGCTGCTCAGAAAATGACCGCCGATTGGAAGCTGCCGCACCAACGCCGAACTGCCAGAAT
 
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JMSF003B02+           AGAATCGACTATCGTCGACTCAGAAACTACCGCGAACCACCGCCGGAAATCTCCGGGATT
JMFF048G17+           AGAATCGGCTCTCGTCGACTCAGAAATTGCCGCGAACCACCGCCGGAAATCTCCGGAATT
JMSF028D03+           AGAATCGACTATCGTCGACTCAGAAACTACCGCGAACCACCGCCGGAAATCTCCGGGATT
                      ____________________________________________________________
consensus             AGAATCGACTATCGTCGACTCAGAAACTACCGCGAACCACCGCCGGAAATCTCCGGGATT
 
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JMSF003B02+           GGTTTGGATCAAA                                               
JMFF048G17+           GGTTCGGATCAAA                                               
JMSF028D03+           GGTTTGGATCAAAATTGGTCGCCGTACTTGCGACGCCTCCGGAATTGGTCCGGGACGATT
                      ____________________________________________________________
consensus             GGTTTGGATCAAAATTGGTCGCCGTACTTGCGACGCCTCCGGAATTGGTCCGGGACGATT
 
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JMSF028D03+           GATGATGATCATGAACCTCGGCCTCCCTTAATTATATACACCCACAGCTTCTGTCAAAGT
                      ____________________________________________________________
consensus             GATGATGATCATGAACCTCGGCCTCCCTTAATTATATACACCCACAGCTTCTGTCAAAGT
 
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JMSF028D03+           CTTGTGCTGAACGATCGGATCTCCCCAAGAATCGGACGCGTTGATGATAATACTGGTTCT
                      ____________________________________________________________
consensus             CTTGTGCTGAACGATCGGATCTCCCCAAGAATCGGACGCGTTGATGATAATACTGGTTCT
 
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JMSF028D03+           GATTTGCGCAAGAACGACTCTCTCGTACGTCGATTGGCGGATGAAGAAATTTATTTGATC
                      ____________________________________________________________
consensus             GATTTGCGCAAGAACGACTCTCTCGTACGTCGATTGGCGGATGAAGAAATTTATTTGATC