| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006N12 | Sequence | 560 | 012038 (25) | ref|XP_009612962.1| | 3e-76 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 526 | 012038 (25) | ref|XP_006483030.1| | 4e-48 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li |
| JMFF010K22 | Sequence | 550 | 012038 (25) | ref|XP_009612962.1| | 7e-88 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | |||||
| JMFF023C08 | Sequence | 528 | 012038 (25) | ref|XP_009612962.1| | 2e-79 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 758 | 012038 (25) | gb|KJB31545.1| | 8e-92 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMFF027H06 | Sequence | 556 | 012038 (25) | ref|XP_009612962.1| | 3e-79 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | |||||
| JMFF028H09 | Sequence | 451 | 012038 (25) | ref|XP_009778100.1| | 1e-59 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | |||||
| JMFF033L02 | Sequence | 525 | 012038 (25) | gb|KJB50163.1| | 3e-121 | hypothetical protein B456_008G156700 [Gossypium raimondii] | 734 | 012038 (25) | ref|XP_006595717.1| | 4e-85 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial is |
| JMFF036N10 | Sequence | 601 | 012038 (25) | ref|XP_009612962.1| | 2e-102 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 724 | 012038 (25) | gb|KJB31545.1| | 5e-104 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMFF037L02 | Sequence | 545 | 012038 (25) | ref|XP_009612962.1| | 9e-82 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 738 | 012038 (25) | gb|KJB31545.1| | 1e-91 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMFF037M05 | Sequence | 603 | 012038 (25) | ref|XP_009612962.1| | 5e-85 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 725 | 012038 (25) | gb|KJB31545.1| | 3e-102 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMFF051E21 | Sequence | 609 | 012038 (25) | ref|XP_009612962.1| | 3e-102 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 572 | 012038 (25) | gb|KDO83131.1| | 2e-66 | hypothetical protein CISIN_1g017504mg [Citrus sinensis] gb|KDO83132.1| hypotheti |
| JMFN010L08 | Sequence | 626 | 012038 (25) | gb|KJB31545.1| | 2e-107 | hypothetical protein B456_005G195600 [Gossypium raimondii] | |||||
| JMSF001L02 | Sequence | 422 | 003449 (2) | ref|XP_009804116.1| | 2e-67 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 679 | 012038 (25) | ref|XP_009612962.1| | 9e-112 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li |
| JMSF015J16 | Sequence | 507 | 012038 (25) | ref|XP_009612962.1| | 2e-68 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 813 | 012038 (25) | gb|KJB31545.1| | 8e-132 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMSF021P01 | Sequence | 654 | 012038 (25) | ref|XP_009612962.1| | 5e-113 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 772 | 012038 (25) | gb|KJB31545.1| | 7e-121 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
| JMSF026N24 | Sequence | 646 | 012038 (25) | ref|XP_009612962.1| | 7e-103 | PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-li | 688 | 012038 (25) | gb|KJB31545.1| | 8e-93 | hypothetical protein B456_005G195600 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMFF033L02- GCGTTGCAACATAAGAAGAAATATCTGCTTT
rJMFF023C08- GCGTTGCAACATAAGAAGAAATATCTGCTTT
____________________________________________________________
consensus GCGTTGCAACATAAGAAGAAATATCTGCTTT
. : . : . : . : . : . :
rJMFF051E21- AATATATATC
rJMFF033L02- TCAGCAGTCCACATCAAGGCTTCTCCAATGTGTTATGACAAAATGGGGGAAATATATATC
rJMFF023C08- TCAGCAGTCCACATCAAGGCTTCTCCAATGTGTTATGACAAAATGGGGG-AATATATATC
rJMFF037L02- GCAGTCCACATCAAGGCTTCTCCAATGTGTTATGACAAAATGGGGGAAATATATATC
rJMFF037M05- GGGGGAATATATATC
rJMSF026N24- ATC
rJMFF036N10- TATC
____________________________________________________________
consensus TCAGCAGTCCACATCAAGGCTTCTCCAATGTGTTATGACAAAATGGGGGAAATATATATC
. : . : . : . : . : . :
rJMFF051E21- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-ACTCAATATCAGTTATTTG
rJMFF033L02- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
rJMFF023C08- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
rJMFF037L02- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
rJMFF037M05- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
rJMSF026N24- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACTGGCTCAATATCAGTTATTTG
rJMFF036N10- CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
rJMSF021P01- GCTCAATATCAGTTATTTG
rJMFF006N12- GTTATTTG
rJMSF015J16- GCTCAATATCAGTTATTTG
____________________________________________________________
consensus CCGCGAATTTTATTTTTTACAAAAAATTTATTCCGACACT-GCTCAATATCAGTTATTTG
. : . : . : . : . : . :
rJMFF051E21- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF033L02- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF023C08- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF037L02- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF037M05- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMSF026N24- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF036N10- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
JMFN010L08+ AGAGCAAAAGGAAGACTGCC
rJMSF021P01- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
rJMFF006N12- TTTGTCCTATGTGTTGCNTTCATGCTGAANNTTCAAGTTAAGAGCAAAANGAAGACTGCC
rJMSF015J16- TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
____________________________________________________________
consensus TTTGTCCTATGTGTTGCATTCATGCTGAAGTTTCAAGTTAAGAGCAAAAGGAAGACTGCC
. : . : . : . : . : . :
rJMFF051E21- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF033L02- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF023C08- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF037L02- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF037M05- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMSF026N24- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF036N10- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
JMFN010L08+ TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMSF021P01- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
rJMFF006N12- TNNNNACCGAGGTGGACANAGAATCAATATCCACNANAGGGCAGGTGTAAATANAGGTGT
rJMSF015J16- TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
____________________________________________________________
consensus TCAACACCGAGGTGGACAAAGAATCAATATCCACAAAAGGGCAGGTGTAAATAAAGGTGT
. : . : . : . : . : . :
rJMFF051E21- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF033L02- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF023C08- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF037L02- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF037M05- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMSF026N24- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF036N10- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
JMFN010L08+ AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMSF021P01- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
rJMFF006N12- AAATTTCAAATTTCAATCTGGATAATTCTAANCANCAGCGGCCTTTTGAACTGATCTATA
rJMSF015J16- AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
____________________________________________________________
consensus AAATTTCAAATTTCAATCTGGATAATTCTAAGCAGCAGCGGCCTTTTGAACTGATCTATA
. : . : . : . : . : . :
rJMFF051E21- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMFF033L02- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMFF023C08- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMFF037L02- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMFF037M05- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMSF026N24- ACAAGTCCTCTTGGCTG---GAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMFF036N10- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTCCAAG
JMFN010L08+ ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMSF021P01- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
rJMSF001L02- GCTGCACGAACAATGTCTTCAACCTGTGGAACAGCCATTCTTTCAAG
rJMFF006N12- ACNAGTCCTCTTGGCTGCACGAACTATATCTTCNACCTGNGGAANGGNCATTCTTTCNNN
rJMSF015J16- ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
____________________________________________________________
consensus ACAAGTCCTCTTGGCTGCACGAACTATATCTTCAACCTGTGGAAGGGCCATTCTTTCAAG
. : . : . : . : . : . :
rJMFF051E21- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMFF033L02- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMFF023C08- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMFF037L02- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMFF037M05- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMSF026N24- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMFF036N10- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
JMFN010L08+ ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMSF021P01- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
rJMSF001L02- ATTTGCTGCATAAGGCATAGGCACATCAGCCCCAGCTATCCTCTCAACTGGTGCATCAAG
rJMFF006N12- ATTTGCTGCATAANGCATANGAACATCNACTCCCGATATCCTTTCNACAGGNGCATCNAG
rJMSF015J16- ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
____________________________________________________________
consensus ATTTGCTGCATAAGGCATAGGAACATCAGCTCCCGATATCCTTTCAACAGGTGCATCAAG
. : . : . : . : . : . :
rJMFF051E21- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMFF033L02- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMFF023C08- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMFF037L02- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMFF037M05- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMSF026N24- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMFF036N10- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
JMFN010L08+ GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMSF021P01- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
rJMSF001L02- GTACTCAAAGCTTTCCTCAACTACAGTTGCACAGATCTCAGCGCCAACACCATGTTGAGG
rJMFF006N12- GTATCCANAGCTTTCCTCNACNACNGNTGCACAGATCTCAGNGCCNACACCATGTTGTGG
rJMSF015J16- GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
____________________________________________________________
consensus GTATCCAAAGCTTTCCTCGACAACAGTTGCACAGATCTCAGCGCCAACACCATGTTGTGG
. : . : . : . : . : . :
rJMFF051E21- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMFF033L02- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMFF023C08- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMFF037L02- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMFF037M05- GAAAACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMSF026N24- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMFF036N10- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
JMFN010L08+ GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMSF021P01- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
rJMSF001L02- AAACGCTTCCTCCACAGTTACCAGTCTGTTGGTTTTCCTAACAGAAGCATTGATTGTAGA
rJMFF006N12- GAACACTTCTTCANCAGTTACAAGTCTGTTGGTTNTCCTGACANAAGCATTGATGGTGGA
rJMSF015J16- GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
____________________________________________________________
consensus GAACACTTCTTCAACAGTTACAAGTCTGTTGGTTTTCCTGACAGAAGCATTGATGGTGGA
. : . : . : . : . : . :
rJMFF051E21- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMFF033L02- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMFF023C08- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMFF037L02- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMFF037M05- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMSF026N24- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMFF036N10- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
JMFN010L08+ TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMSF021P01- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
rJMSF001L02- TCTATCAAGTGGTCTGATTGAGCGCAAATTGATAATCTCAGCACTGATTCCTTCCTTTGC
rJMFF006N12- TCTATCAANANGTCTGATTGANCACAAATTTATAACCTCANCACTGATTCCTTCCTTTGC
rJMSF015J16- TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
____________________________________________________________
consensus TCTATCAAGAGGTCTGATTGAGCGCAAATTTATAACCTCAGCACTGATTCCTTCCTTTGC
. : . : . : . : . : . :
rJMFF051E21- AAGAATCTCTGCAGCCTTT
rJMFF033L02- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMFF023C08- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMFF037L02- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMFF037M05- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMSF026N24- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMFF036N10- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
JMFN010L08+ AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
rJMSF021P01- AAGAATCTCTGCAGCCT
rJMSF001L02- AAGAATCTCAGCAGCCTTGAGAGCATAACCAACCATTTTTGAGAAAGCAGTGATTGTCAC
rJMFF006N12- NANAATCTCT
rJMSF015J16- AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
____________________________________________________________
consensus AAGAATCTCTGCAGCCTTTAGAGCATAGCCCACCATTTTTGAGAAAGCAGTGATAGTCAC
. : . : . : . : . : . :
rJMFF033L02- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGAC
rJMFF023C08- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMFF037L02- ATCCTTTCCTTCTCTTTCNATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMFF037M05- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMSF026N24- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMFF036N10- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
JMFN010L08+ ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMSF001L02- ATCCTTTCCATCACACTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
rJMSF015J16- ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
____________________________________________________________
consensus ATCCTTTCCTTCTCTTTCAATTTTAGCTTTCCCAATTGGAAGACAGAAACTAGAATCAAG
. : . : . : . : . : . :
rJMFF023C08- AGCTTCATC
rJMFF037L02- AGCTTCATCTGA
rJMFF037M05- AGCTTCATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCA
rJMSF026N24- AGCTTCATCTGAAATAGGGAAGGACTCG
rJMFF036N10- AGCTTCATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCAAGGAATACAAC
JMFN010L08+ AGCTTCATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCAAGGAATACAAC
rJMSF001L02- AGCTTCAGCTGATACAGGGAAGGACTCACCATATAGCAATTCATTTTCAAGGAAAACAAC
rJMSF015J16- AGCTTCATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCAAGGAATACAAC
JMFF033L02+ ATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCAAGGAATACAAC
____________________________________________________________
consensus AGCTTCATCTGAAATAGGGAAGGACTCGCCATATAGCAATTCATTTTCAAGGAATACAAC
. : . : . : . : . : . :
rJMFF036N10- A
JMFN010L08+ AGGATC
rJMSF001L02- AGGATCTGGGTCCCTAATAGCAGCTTTGAG
rJMSF015J16- AGGATCTGGGTCCCTAATAGCAGCTTTGAGAAGCCCACGAGCATCTTCAGAAGAGTATGG
JMFF033L02+ AGGATCTGGGTCCCTAATAGCAGCTTTGAGAAGCCCACGAGCATCTTCAGAAGAGTATGG
____________________________________________________________
consensus AGGATCTGGGTCCCTAATAGCAGCTTTGAGAAGCCCACGAGCATCTTCAGAAGAGTATGG
. : . : . : . : . : . :
rJMSF015J16- AGCTAGAACCTTAAGTCCTGGACATGCAGCATACCATGCTGCATAG
JMFF033L02+ AGCTAGAACCTTAAGTCCTGGACATGCAGCATACCATGCTGCATAGCACTGGGAGTGCTG
JMFF036N10+ TGGACATGCAGCATACCATGCTGCATAGCACTGGGAGTGCTG
JMFF051E21+ TGGACATGCAGCATACCATGCTGCATAGCACTGGGAGTGCTG
JMSF026N24+ TCCTGGACATGCAGCATACCATGCTGCATAGCACTGGGAGTGCTG
____________________________________________________________
consensus AGCTAGAACCTTAAGTCCTGGACATGCAGCATACCATGCTGCATAGCACTGGGAGTGCTG
. : . : . : . : . : . :
JMFF033L02+ GGCACCAACACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
JMFF036N10+ GGCACCAACACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
JMFF010K22+ ACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
JMFF037L02+ CCATTAGGTCCTGTGAAAACAATAGGCACAGAGATNTG
JMFF051E21+ GGCACCAACACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
JMFF037M05+ CCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
JMFF027H06+ AATAGGCACAGAGATCTG
JMFF006N12+ AAACAATAGGCACAGAGATNTG
JMFF023C08+ ACAATAGGCACAGAGATCTG
JMSF026N24+ GGCACCAACACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
____________________________________________________________
consensus GGCACCAACACCAGCTGCAGCTCCATTAGGTCCTCTGAAAACAATAGGCACAGAGATCTG
. : . : . : . : . : . :
JMFF033L02+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF036N10+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF010K22+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF037L02+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTTAATTGCCTGCAT
JMFF051E21+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF037M05+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF027H06+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF006N12+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMFF023C08+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMSF021P01+ CCTGCAT
JMFF028H09+ CAT
JMSF015J16+ TTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
JMSF026N24+ ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
____________________________________________________________
consensus ACCAGCAGACATGTAGTTTGATTTTGCAGCAGAATTAATGATATGGTCAATTGCCTGCAT
. : . : . : . : . : . :
JMFF033L02+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF036N10+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF010K22+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF037L02+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF051E21+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF037M05+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF027H06+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF006N12+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF023C08+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMSF021P01+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMFF028H09+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMSF015J16+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
JMSF026N24+ TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
____________________________________________________________
consensus TGAAAAGTTAAATGTCATGAATTCTATAATAGGCTTCAGACCATAGTAAGCTGCACCCAC
. : . : . : . : . : . :
JMFF033L02+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF036N10+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF010K22+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF037L02+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF051E21+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF037M05+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGNTGTATCAAGAACTCTGTCTGGACCATA
JMFF027H06+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF006N12+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTNTGGACCATA
JMFF023C08+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMSF021P01+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMFF028H09+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMSF015J16+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
JMSF026N24+ TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
____________________________________________________________
consensus TCCAATCCCAGCAAATCCAGCCTCAGTAATAGGTGTATCAAGAACTCTGTCTGGACCATA
. : . : . : . : . : . :
JMFF033L02+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCTTGGTACTCACCAACCTCTTCACC
JMFF036N10+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF010K22+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF037L02+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF051E21+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF037M05+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF027H06+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF006N12+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTNTTCACC
JMFF023C08+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMSF021P01+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMFF028H09+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMSF015J16+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
JMSF026N24+ CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
____________________________________________________________
consensus CTTCTCCAAAAGCCCTTTTGTAATCTTGTATGCCCCCTGGTACTCACCAACCTCTTCACC
. : . : . : . : . : . :
JMFF033L02+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATT
JMFF036N10+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF010K22+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF037L02+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF051E21+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF037M05+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF027H06+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF006N12+ CATTAAAAAGACCTTAGGATCCGCAGACATTTNTTCATCAAGTGCTGAATTCAAGGCATC
JMFF023C08+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMSF021P01+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMFF028H09+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMSF015J16+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
JMSF026N24+ CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
____________________________________________________________
consensus CATTAAAAAGACCTTAGGATCCGCAGACATTTCTTCATCAAGTGCTGAATTCAAGGCATC
. : . : . : . : . : . :
JMFF036N10+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF010K22+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF037L02+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTNT
JMFF051E21+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF037M05+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF027H06+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF006N12+ ACGCACTGTTGTCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF023C08+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMSF021P01+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMFF028H09+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGAGATGCAAATACCCTGCTTNT
JMSF015J16+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
JMSF026N24+ ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
____________________________________________________________
consensus ACGCACTGTTATCTCTTTAGTCGTTGAAGAGAAGCTGCGGGATGCAAATACCCTGCTTCT
. : . : . : . : . : . :
JMFF036N10+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF010K22+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF037L02+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF051E21+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF037M05+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF027H06+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF006N12+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF023C08+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMSF021P01+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMFF028H09+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACNTAC
JMSF015J16+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
JMSF026N24+ CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
____________________________________________________________
consensus CATCAAAAATCTGTTTGCAATCAGAGCAGAAATGCCAGTAGAGGCCATTTTGCGACCTAC
. : . : . : . : . : . :
JMFF036N10+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF010K22+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF037L02+ AATTCCAGACATATCAATCCTCTTNTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF051E21+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF037M05+ AANTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF027H06+ AATTCCAGACATATCAATCCTNTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF006N12+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF023C08+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMSF021P01+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMFF028H09+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAGTCCCTGGGAGGTGTTTGA
JMSF015J16+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
JMSF026N24+ AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
____________________________________________________________
consensus AATTCCAGACATATCAATCCTCTTCTACTCGCACAATCACAG-CCCTGGGAGGTGTTTGA
. : . : . : . : . : . :
JMFF036N10+ CTGTTTGATGGAGGAGT
JMFF010K22+ CTGTTTGATGGAGGAGT
JMFF037L02+ CTGTTTGATGGAGGAGTGTTTGGGCAAC
JMFF051E21+ CTGTTTGATGGAGGAGTGTTTGGGCAAC
JMFF037M05+ CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTCGTATT
JMFF027H06+ CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTNGTATT
JMFF006N12+ CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTCGTATT
JMFF023C08+ CTGTTTGATGGAGGAGTGTTGGGGCAAC
JMSF021P01+ CTGTTTGATGGAGGAGTGTTTGGGCAAC
JMFF028H09+ CTGTTTGATGGAGGAGTGTTTGGGCAAC
JMSF015J16+ CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTC
JMSF026N24+ CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTCGTATTTGATC
____________________________________________________________
consensus CTGTTTGATGGAGGAGTGTTTGGGCAACAAAATTCCCAAAAGCTGCCTTCGTATTTGATC