Contig 012026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011P06Sequence312012026 (3)gb|KHF97501.1|6e-08Maltoporin [Gossypium arboreum]675004274 (4)ref|XP_004243351.1|4e-46PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum]
JMSF018E01Sequence246012026 (3)ref|XP_006357482.1|2e-11PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum]779004274 (4)ref|XP_004243351.1|1e-53PREDICTED: bromodomain-containing protein 4-like [Solanum lycopersicum]
JMSF025K15Sequence654012026 (3)ref|XP_006357482.1|1e-64PREDICTED: transcription factor SPT20 homolog [Solanum tuberosum]779004274 (4)ref|XP_006367642.1|7e-53PREDICTED: adenylate cyclase, terminal-differentiation specific-like [Solanum t

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025K15+ TCAAGTGAATTGAGCTTGGTATCCGCTGCTCCATGATCACGAATCATATGAGAC
                      ____________________________________________________________
consensus TCAAGTGAATTGAGCTTGGTATCCGCTGCTCCATGATCACGAATCATATGAGAC
 
. : . : . : . : . : . :
JMSF025K15+ TGTACTTCTCCAATCGATTTATCAAGATTGTAACAATATAATTCCAACTGAGACAGCCGT
                      ____________________________________________________________
consensus TGTACTTCTCCAATCGATTTATCAAGATTGTAACAATATAATTCCAACTGAGACAGCCGT
 
. : . : . : . : . : . :
JMSF025K15+ GAACTAATTCCCTCAAGGAAACGCATCAGATTGTCAGCATACTTCTTCATGGTCATGTCA
                      ____________________________________________________________
consensus GAACTAATTCCCTCAAGGAAACGCATCAGATTGTCAGCATACTTCTTCATGGTCATGTCA
 
. : . : . : . : . : . :
JMSF025K15+ ACAGTAACCATAACATCTTCATTAAATGACGATTCTTCAGGAAGCCTATAAGGCGGAGCA
                      ____________________________________________________________
consensus ACAGTAACCATAACATCTTCATTAAATGACGATTCTTCAGGAAGCCTATAAGGCGGAGCA
 
. : . : . : . : . : . :
JMSF018E01+ TGCAGAAGTGGACGCA
JMSF025K15+ GTAAACATAGATGATCTCGTCATTCTGTTTTTTTGGAACTCCTTTGCAGAAGTGGACGCA
                      ____________________________________________________________
consensus GTAAACATAGATGATCTCGTCATTCTGTTTTTTTGGAACTCCTTTGCAGAAGTGGACGCA
 
. : . : . : . : . : . :
JMSF011P06+ CGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
JMSF018E01+ GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
JMSF025K15+ GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
                      ____________________________________________________________
consensus GCCGCGGGATCGGAGTGGAGGGTGCCATTAGAACTGGCGTGATTGGAGTAATCTTCGTAG
 
. : . : . : . : . : . :
JMSF011P06+ GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
JMSF018E01+ GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
JMSF025K15+ GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
                      ____________________________________________________________
consensus GAGCAAAGAATATCATCGGAGGCGGCGAAGTCAAACCCTTTGGAGACCGAATTGTTGGCC
 
. : . : . : . : . : . :
JMSF011P06+ GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
JMSF018E01+ GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
JMSF025K15+ GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
                      ____________________________________________________________
consensus GGAGCTGAGGATCCAGATGCCATAACCGCGAACAGAGAAATCTAACACTTTTGCTGAAGC
 
. : . : . : . : . : . :
JMSF011P06+ TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
JMSF018E01+ TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATC
JMSF025K15+ TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
                      ____________________________________________________________
consensus TGCGAATATTTCTAAAGATTATATGCAGAGAGAGGGGAAGAAAGGTATCGAAGTAGAAGT
 
. : . : . : . : . : . :
JMSF011P06+ GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
JMSF025K15+ GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
                      ____________________________________________________________
consensus GTAGAAGCAGGTGTGTGTGGACACATGAATTTCGGGGTGTACAGTACTGAAGCGTTTTTG
 
. : . : . : . : . : . :
JMSF011P06+ ATGAACCAACGTGAAAATCAT
JMSF025K15+ ATGAACCAACGTGAAAATCATGGCGGTTAGACTTCGAGGTTTGGTACTGAAGAAAGGCAC
                      ____________________________________________________________
consensus ATGAACCAACGTGAAAATCATGGCGGTTAGACTTCGAGGTTTGGTACTGAAGAAAGGCAC