clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS143G04 | Sequence | 627 | 012018 (3) | ref|XP_009587533.1| | 1e-81 | PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2 [Nicotiana tomen | |||||
JMSF023E24 | Sequence | 635 | 012018 (3) | ref|XP_009587533.1| | 4e-74 | PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2 [Nicotiana tomen | 797 | 001364 (2) | ref|XP_010094092.1| | 1e-61 | hypothetical protein L484_018109 [Morus notabilis] gb|EXB55182.1| hypothetical p |
JMSF024D24 | Sequence | 628 | 012018 (3) | ref|XP_009587533.1| | 4e-66 | PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2 [Nicotiana tomen | 772 | 001364 (2) | ref|XP_010094092.1| | 5e-65 | hypothetical protein L484_018109 [Morus notabilis] gb|EXB55182.1| hypothetical p |
This contig is upended
. : . : . : . : . : . :
JMFS143G04+ GAGAACACCCATAACTTTAGGGAACCCATGATTN
____________________________________________________________
consensus GAGAACACCCATAACTTTAGGGAACCCATGATTN
. : . : . : . : . : . :
JMFS143G04+ TGCAATATATTAAGGAACTCAAAAGTTTCCATTTCAAATCCATAGCTTCCATCAATGAGA
JMSF023E24+ TGCAATATATTAAGGAACTCAAAAGTTTCCATTTCAAATCCATAGCTTCCATCAATGAGA
JMSF024D24+ TTCAAATCCATAGCTTCCATCAATGAGA
____________________________________________________________
consensus TGCAATATATTAAGGAACTCAAAAGTTTCCATTTCAAATCCATAGCTTCCATCAATGAGA
. : . : . : . : . : . :
JMFS143G04+ AGCAATGCTAAATCAGCAAACTTTGCAACATCAATCATGCCATTGATATCATTTGGGCAC
JMSF023E24+ AGCAATGCTAAATCAGCAAACTTTGCAACATCAATCATGCCATTGATATCATTTGGGCAC
JMSF024D24+ AGCAATGCTAAATCAGCAAACTTTGCAACATCAATCATGCCATTGATATCATTTGGGCAC
____________________________________________________________
consensus AGCAATGCTAAATCAGCAAACTTTGCAACATCAATCATGCCATTGATATCATTTGGGCAC
. : . : . : . : . : . :
JMFS143G04+ TCCACAAACTGCAAACGCCTTTGCTTTCCTGATACAATAGTAATAGGACCACGAACTTCA
JMSF023E24+ TCCACAAACTGCAAACGCCTTTGCTTTCCTGATACAATAGTAATAGGACCACGAACTTCA
JMSF024D24+ TCCACAAACTGCAAACGCCTTTGCTTTCCTGATACAATAGTAATAGGACCACGAACTTCA
____________________________________________________________
consensus TCCACAAACTGCAAACGCCTTTGCTTTCCTGATACAATAGTAATAGGACCACGAACTTCA
. : . : . : . : . : . :
JMFS143G04+ GGTAAATTATGCTTTGTGTAGTGCTTGACAAGAGTCTTTATAAGCAGCGATTTTCCGACC
JMSF023E24+ GGTAAATTATGCTTTGTGTAGTGCTTGACAAGAGTCTTTATAAGCAGCGATTTTCCGACC
JMSF024D24+ GGTAAATTATGCTTTGTGTAGTGCTTGACAAGAGTCTTTATAAGCAGCGATTTTCCGACC
____________________________________________________________
consensus GGTAAATTATGCTTTGTGTAGTGCTTGACAAGAGTCTTTATAAGCAGCGATTTTCCGACC
. : . : . : . : . : . :
JMFS143G04+ TTGGGCGGTCCCTGGACTACAACAACAAAGGGAGCTGGCTCCCCGGTGGAGCGGTCAATT
JMSF023E24+ TTGGGCGGTCCCTGGACTACAACAACAAAGGGAGCTGGCTCCCCGGTGGAGCGGTCAATT
JMSF024D24+ TTGGGCGGTCCCTGGACTACAACAACAAAGGGAGCTGGCTCCCCGGTGGAGCGGTCAATT
____________________________________________________________
consensus TTGGGCGGTCCCTGGACTACAACAACAAAGGGAGCTGGCTCCCCGGTGGAGCGGTCAATT
. : . : . : . : . : . :
JMFS143G04+ GTCGGGACATGAAGCCTCCGCTGCTCCTTCTCGGTAGCTCGGGATTGCAGCCGCTTGGCT
JMSF023E24+ GTCGGGACATGAAGCCTCCGCTGCTCCTTCTCGGTAGCTCGGGATTGCAGCCGCTTGGCT
JMSF024D24+ GTCGGGACATGAAGCCTCCGCTGCTCCTTCTCGGTAGCTCGGGATTGCAGCCGCTTGGCT
____________________________________________________________
consensus GTCGGGACATGAAGCCTCCGCTGCTCCTTCTCGGTAGCTCGGGATTGCAGCCGCTTGGCT
. : . : . : . : . : . :
JMFS143G04+ TTTACTGTTGAAGTGAATGCAAACGCCTTAGGATTTTTTTGTTTTTGACTTTCGTCAATG
JMSF023E24+ TTTACTGTTGAAGTGAATGCAAACGCCTTAGGATTTTTTTGTTTTTGACTTTCGTCAATG
JMSF024D24+ TTTACTGTTGAAGTGAATGCAAACGCCTTAGGATTTTTTTGTTTTTGACTTTCGTCAATG
____________________________________________________________
consensus TTTACTGTTGAAGTGAATGCAAACGCCTTAGGATTTTTTTGTTTTTGACTTTCGTCAATG
. : . : . : . : . : . :
JMFS143G04+ GACTTCGATTTCTTCTTAGCTGAGGAGCCAGACTGCCGCTTCCTGTGCGACTTGTGCGAC
JMSF023E24+ GACTTCGATTTCTTCTTAGCTGAGGAGCCAGACTGCCGCTTCCTGTGCGACTTGTGCGAC
JMSF024D24+ GACTTCGATTTCTTCTTAGCTGAGGAGCCAGACTGCCGCTTCCTGTGCGACTTGTGCGAC
____________________________________________________________
consensus GACTTCGATTTCTTCTTAGCTGAGGAGCCAGACTGCCGCTTCCTGTGCGACTTGTGCGAC
. : . : . : . : . : . :
JMFS143G04+ TGCTCCTTACTGCCTTCAACCGCCATAGCTAGTTTTCAAAGGGAGACGGATTCCAGAGGG
JMSF023E24+ TGCTCCTTACTGCCTTCAACCGCCATAGCTAGTTTTCAAAGGGAGACGGATTCCAGAGGG
JMSF024D24+ TGCTCCTTACTGCCTTCAACCGCCATAGCTAGTTTTCAAAGGGAGACGGATTCCAGAGGG
____________________________________________________________
consensus TGCTCCTTACTGCCTTCAACCGCCATAGCTAGTTTTCAAAGGGAGACGGATTCCAGAGGG
. : . : . : . : . : . :
JMFS143G04+ CGAGGCGAAGTTTTTTAGAGTGAGTTCATGAAGGCTGTTGTTGAAGCTGATGA
JMSF023E24+ CGAGGCGAAGTTTTTTAGAGTGAGTTCATGAAGGCTGTTGTTGAAGCTGATGATTATGGA
JMSF024D24+ CGAGGCGAAGTTTTTTAGAGTGAGTTCATGAAGGCTGTTGTTGAAGCTGATGATTATGGA
____________________________________________________________
consensus CGAGGCGAAGTTTTTTAGAGTGAGTTCATGAAGGCTGTTGTTGAAGCTGATGATTATGGA
. : . : . : . : . : . :
JMSF023E24+ GGTTAATGGGGGGTGAGGAGGCGAAAGCCAGC
JMSF024D24+ GGTTAATGGGGGGTGAGGAGGCGAAAGCCAGCGGCGGGATTATGGCGCCGGTGACCTGCC
____________________________________________________________
consensus GGTTAATGGGGGGTGAGGAGGCGAAAGCCAGCGGCGGGATTATGGCGCCGGTGACCTGCC