Contig 012015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023M14Sequence644012015 (2)ref|XP_011084903.1|1e-93PREDICTED: protein SRG1-like [Sesamum indicum]729012015 (2)ref|XP_009595967.1|6e-115PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023M14- TATATATTTTTGTTAACATATATATAAGGCTACAAGATT
                      ____________________________________________________________
consensus TATATATTTTTGTTAACATATATATAAGGCTACAAGATT
 
. : . : . : . : . : . :
rJMSF023M14- TACAATCAATTGGAATGAGCATTGAGCAATACATAATAATTATTTAACGCTAATTAATGA
                      ____________________________________________________________
consensus TACAATCAATTGGAATGAGCATTGAGCAATACATAATAATTATTTAACGCTAATTAATGA
 
. : . : . : . : . : . :
rJMSF023M14- CACTAAGTATATATACTTATGTGTATTATCTTGGCGATTTTGTAGACTGCCCTATCTGTG
                      ____________________________________________________________
consensus CACTAAGTATATATACTTATGTGTATTATCTTGGCGATTTTGTAGACTGCCCTATCTGTG
 
. : . : . : . : . : . :
rJMSF023M14- ATTTTCCCCTAGGACCCTTCGTCCTTATGTAAAGTCTATACTCGTTAAACGTCATCGCCG
                      ____________________________________________________________
consensus ATTTTCCCCTAGGACCCTTCGTCCTTATGTAAAGTCTATACTCGTTAAACGTCATCGCCG
 
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rJMSF023M14- GATATAATGGTGGATTTTCCGGTGTGATGAGCTCCTTCATTGGTTGTACAAGTAACTCTC
                      ____________________________________________________________
consensus GATATAATGGTGGATTTTCCGGTGTGATGAGCTCCTTCATTGGTTGTACAAGTAACTCTC
 
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rJMSF023M14- CCCTTGGATTGTAAAAATATGCCAAGGATACACGCTCTTCATTTGAGTTAACAATCACTC
                      ____________________________________________________________
consensus CCCTTGGATTGTAAAAATATGCCAAGGATACACGCTCTTCATTTGAGTTAACAATCACTC
 
. : . : . : . : . : . :
rJMSF023M14- TGTGCTCAACGCTTTTGTACACTGCATTGCTTAGTACCTGAATTTGATCCCCAATATTGA
                      ____________________________________________________________
consensus TGTGCTCAACGCTTTTGTACACTGCATTGCTTAGTACCTGAATTTGATCCCCAATATTGA
 
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rJMSF023M14- CGATGAAAGCATGCTGGGCCGGTTTAACGGTGATCCACTGGTCGTTCCGGCGGACTTGGA
                      ____________________________________________________________
consensus CGATGAAAGCATGCTGGGCCGGTTTAACGGTGATCCACTGGTCGTTCCGGCGGACTTGGA
 
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rJMSF023M14- GGCCGGCGACGTGCTGGTCCGGCAAGAGGATGGTCAAGCCGCCGGGGTCGGAATGAGAGG
                      ____________________________________________________________
consensus GGCCGGCGACGTGCTGGTCCGGCAAGAGGATGGTCAAGCCGCCGGGGTCGGAATGAGAGG
 
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rJMSF023M14- AGAGTCCGAGGGTGAGGTCCGGTTGGGGACATTTTGGGTAAAAATTTATTCTTAAACAAG
                      ____________________________________________________________
consensus AGAGTCCGAGGGTGAGGTCCGGTTGGGGACATTTTGGGTAAAAATTTATTCTTAAACAAG
 
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rJMSF023M14- CTCCAATGTCTTCCCCTCCAAACGCCTTTTGCAGACAACTTTCGTGTAGTCCGAGGTTAA
                      ____________________________________________________________
consensus CTCCAATGTCTTCCCCTCCAAACGCCTTTTGCAGACAACTTTCGTGTAGTCCGAGGTTAA
 
. : . : . : . : . : . :
rJMSF023M14- TCGACAAAATCTTCATTAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
JMSF023M14+ TAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
                      ____________________________________________________________
consensus TCGACAAAATCTTCATTAATTTCCCGCACAATTTTACCACTTGGTCAGAGTATTCTTCAA
 
. : . : . : . : . : . :
rJMSF023M14- TCACTTCCCTTAAAGAAGATGGAAAGGCGG
JMSF023M14+ TCACTTCCCTTAAAGAAGATGGAAAGGCGGGCCATTTGTTATGGTCCTTCAAAGAAGAAG
                      ____________________________________________________________
consensus TCACTTCCCTTAAAGAAGATGGAAAGGCGGGCCATTTGTTATGGTCCTTCAAAGAAGAAG
 
. : . : . : . : . : . :
JMSF023M14+ GGAGATAGTGAAGGAAATAGTAATCACTCCAATCAAGAATGGCGCCTTTCTCGACGCCCA
                      ____________________________________________________________
consensus GGAGATAGTGAAGGAAATAGTAATCACTCCAATCAAGAATGGCGCCTTTCTCGACGCCCA
 
. : . : . : . : . : . :
JMSF023M14+ ACCGGCTGCCGTAACCCTCGTAAGTGGTCGGAGAATTAGCGTACGCGGTTTTCACATCCA
                      ____________________________________________________________
consensus ACCGGCTGCCGTAACCCTCGTAAGTGGTCGGAGAATTAGCGTACGCGGTTTTCACATCCA
 
. : . : . : . : . : . :
JMSF023M14+ TGGGTTGGTGGAAGAATTCGCGCCAGACCTCCCTGGCTTGGTCCATCAACTCCGGCCGGA
                      ____________________________________________________________
consensus TGGGTTGGTGGAAGAATTCGCGCCAGACCTCCCTGGCTTGGTCCATCAACTCCGGCCGGA
 
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JMSF023M14+ CTCCGTGGTTCACCACCTGGAAAAACCCCCAGCTCCGGCAAGCCTCGGAGACCTGCTCCA
                      ____________________________________________________________
consensus CTCCGTGGTTCACCACCTGGAAAAACCCCCAGCTCCGGCAAGCCTCGGAGACCTGCTCCA
 
. : . : . : . : . : . :
JMSF023M14+ GGACGGCGGGGTTTACGTCGCCGTCGCCGTCGAGAAACTGCTGGAAGTCGATTAACGGGA
                      ____________________________________________________________
consensus GGACGGCGGGGTTTACGTCGCCGTCGCCGTCGAGAAACTGCTGGAAGTCGATTAACGGGA
 
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JMSF023M14+ TGTTGACGTCGGCGGCGGCGGCGGCGGTTAACGACGGCCGGTCTGTTGGCGGCTTGACGT
                      ____________________________________________________________
consensus TGTTGACGTCGGCGGCGGCGGCGGCGGTTAACGACGGCCGGTCTGTTGGCGGCTTGACGT
 
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JMSF023M14+ ACCTGTCGGGGATGGTGCCCAGACCGCTGTCGGACAGCGATTGGACGCGGACGATTGGCT
                      ____________________________________________________________
consensus ACCTGTCGGGGATGGTGCCCAGACCGCTGTCGGACAGCGATTGGACGCGGACGATTGGCT
 
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JMSF023M14+ CGGGCCAATCTCGCGGGCAGTTCATGTCGGAACCAACGGATTTACGTCGTCGTCGTCGCT
                      ____________________________________________________________
consensus CGGGCCAATCTCGCGGGCAGTTCATGTCGGAACCAACGGATTTACGTCGTCGTCGTCGCT
 
. : . : . : . : . : . :
JMSF023M14+ AAAATCAAGTACGATCGATGGTGACTATTGGGTGGTTAGTTGGGTCTTGAATTTGCTAGC
                      ____________________________________________________________
consensus AAAATCAAGTACGATCGATGGTGACTATTGGGTGGTTAGTTGGGTCTTGAATTTGCTAGC