Contig 012010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E14Sequence608012010 (6)ref|XP_011081286.1|2e-91PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum]
JMFF030L11Sequence608012010 (6)ref|XP_011081286.1|2e-91PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum]757006204 (7)emb|CDP09995.1|7e-107unnamed protein product [Coffea canephora]
JMFF033I14Sequence477012010 (6)ref|XP_009785488.1|2e-57PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Nicotiana sylvestris]810006204 (7)emb|CDP09995.1|2e-114unnamed protein product [Coffea canephora]
JMSF014D17Sequence481012010 (6)emb|CDP09995.1|5e-48unnamed protein product [Coffea canephora]759006204 (7)emb|CDP09995.1|8e-116unnamed protein product [Coffea canephora]
JMSF023G21Sequence695012010 (6)ref|XP_011081286.1|1e-97PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum]765006204 (7)emb|CDP09995.1|8e-86unnamed protein product [Coffea canephora]
JMSF034N01Sequence678012010 (6)ref|XP_011081286.1|4e-108PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum]707006204 (7)emb|CDP09995.1|2e-100unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF034N01+                                                 ATAAGACGTGCATAAACAACTG
                      ____________________________________________________________
consensus                                                   ATAAGACGTGCATAAACAACTG
 
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JMSF034N01+           CATGGGTAGAGACTTTACCCAATCCACCGGGCCACCACTTGCTTGAAGTCAGTGTAGGAC
JMFF030L11+                                                        AAGTCAGTGTAGGAC
JMFF019E14+                                                        AAGTCAGTGTAGGAC
JMSF023G21+                                    ACCGGGCCACCACTTGCTTGAAGTCAGTGTAGGAC
                      ____________________________________________________________
consensus             CATGGGTAGAGACTTTACCCAATCCACCGGGCCACCACTTGCTTGAAGTCAGTGTAGGAC
 
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JMSF034N01+           TGTGAATAATAAATTCACCAGTTCGGGGATCAAAAGTGGCAGTGGTTTCAAGGCCTTGCA
JMFF030L11+           TGTGAATAATAAATTCATCAGTTCGGGGATCAAAAGTGGCAGTGGTTTCAAGGCCTTGCA
JMFF019E14+           TGTGAATAATAAATTCATCAGTTCGGGGATCAAAAGTGGCAGTGGTTTCAAGGCCTTGCA
JMSF023G21+           TGTGAATAATAAATTCATCAGTTCGGGGATCAAAAGTGGCAGTGGTTTCAAGGCCTTGCA
                      ____________________________________________________________
consensus             TGTGAATAATAAATTCATCAGTTCGGGGATCAAAAGTGGCAGTGGTTTCAAGGCCTTGCA
 
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JMFF033I14+                                                                     GG
JMSF034N01+           CGTTCGATCCATGACCAAGCTCAGTTTGTGCGTAGCAGCCAATAATTTCCATTTTGTAGG
JMFF030L11+           CGTTCGATCCATGACCAAGCTCAGTTTGTGCGTAGCAGCCAATAATTTCCATTTTGTAGG
JMFF019E14+           CGTTCGATCCATGACCAAGCTCAGTTTGTGCGTAGCAGCCAATAATTTCCATTTTGTAGG
JMSF023G21+           CGTTCGATCCATGACCAAGCTCAGTTTGTGCGTAGCAGCCAATAATTTCCATTTTGTAGG
                      ____________________________________________________________
consensus             CGTTCGATCCATGACCAAGCTCAGTTTGTGCGTAGCAGCCAATAATTTCCATTTTGTAGG
 
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JMFF033I14+           CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
JMSF034N01+           CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
JMFF030L11+           CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
JMFF019E14+           CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
JMSF014D17+                                                         TATGGCAGGTACAA
JMSF023G21+           CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
                      ____________________________________________________________
consensus             CCAACGGTAACCACTTCTTTTGCTGTTCTTCGGTGCCCGATCCTTTTATGGCAGGTACAA
 
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JMFF033I14+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
JMSF034N01+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
JMFF030L11+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
JMFF019E14+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
JMSF014D17+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
JMSF023G21+           ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
                      ____________________________________________________________
consensus             ACATACCCCAATGAAGGTCAGTATACGCAGGCTCATCCATATAGAACCTAAACTTTCGTG
 
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JMFF033I14+           CCTNTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
JMSF034N01+           CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
JMFF030L11+           CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
JMFF019E14+           CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
JMSF014D17+           CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
JMSF023G21+           CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
                      ____________________________________________________________
consensus             CCTCTTCCTCGGTAAGACGAAGTTCATTGATTAGTTTCCAGGCATGATTCACCTTCCTCA
 
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JMFF033I14+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
JMSF034N01+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
JMFF030L11+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
JMFF019E14+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
JMSF014D17+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
JMSF023G21+           GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
                      ____________________________________________________________
consensus             GTGCATTCTTAAACAATTCCTTCCTTGGCATCATAGTTCTGCCCTCCTTACTAAGAGCAG
 
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JMFF033I14+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
JMSF034N01+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
JMFF030L11+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
JMFF019E14+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
JMSF014D17+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
JMSF023G21+           GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
                      ____________________________________________________________
consensus             GATCGCTGGCAACGAGCTTGGAGATACGGTCATGGAGTTGAAATTCAGATAGAGAGCCGG
 
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JMFF033I14+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
JMSF034N01+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
JMFF030L11+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
JMFF019E14+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
JMSF014D17+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
JMSF023G21+           CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
                      ____________________________________________________________
consensus             CCCAAGCGATCTTCATTGCATCAACGTCAAACTCAGCCTTCCTCCTCTCGCCGGCCAAGA
 
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JMFF033I14+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
JMSF034N01+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
JMFF030L11+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
JMFF019E14+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
JMSF014D17+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
JMSF023G21+           AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
                      ____________________________________________________________
consensus             AGTCAACGGATGCCATTCTCTTGTGTCTTTCTCTACTGCTCACAAACAAAACCCAGAGCT
 
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JMFF033I14+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGACGC     
JMSF034N01+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGACGC     
JMFF030L11+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGAC       
JMFF019E14+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGAC       
JMSF014D17+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGACGCGAAAA
JMSF023G21+           CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGACGCGAAAA
                      ____________________________________________________________
consensus             CTGATTTGAGAGTAATACACAGAACTCTCGAGTTTATCCCTTAAAAATGAGACGCGAAAA
 
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JMSF014D17+           GGAATGGGCACAGCCTTGAAGCCTTTGTAGGTGTGCGGTCTGTGAC              
JMSF023G21+           GGAATGGGCACAGCCTTGAAGCCTTTGTAGGTGTGCGGTCTGTGACAATGTGGGACGGTC
                      ____________________________________________________________
consensus             GGAATGGGCACAGCCTTGAAGCCTTTGTAGGTGTGCGGTCTGTGACAATGTGGGACGGTC