Contig 011993:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS008G05Sequence642011993 (7)ref|NP_001142479.1|2e-107uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot
JMFS043F07Sequence627011993 (7)ref|NP_001142479.1|2e-109uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot
JMFS107G02Sequence635011993 (7)gb|KDO58184.1|5e-124hypothetical protein CISIN_1g0453552mg, partial [Citrus sinensis]
JMFS118C02Sequence627011993 (7)ref|NP_001142479.1|4e-108uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot
JMFS126A02Sequence551011993 (7)ref|NP_001142479.1|6e-102uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot
JMSF020M12Sequence631011993 (7)ref|NP_001142479.1|3e-105uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot737004257 (2)ref|XP_006356169.1|3e-05PREDICTED: N-alpha-acetyltransferase 15, NatA auxiliary subunit-like [Solanum t
JMSF050A07Sequence641011993 (7)ref|NP_001142479.1|2e-115uncharacterized protein LOC100274696 [Zea mays] gb|ACG24261.1| hypothetical prot694004257 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS107G02+ TCCAAGGCATCTTTGTAACCCCTCATAGTATCTGTAATTGTCAGGGTTCATAGAGA
                      ____________________________________________________________
consensus TCCAAGGCATCTTTGTAACCCCTCATAGTATCTGTAATTGTCAGGGTTCATAGAGA
 
. : . : . : . : . : . :
JMFS107G02+ GCAACACCTTATACAATCTTTCACCTTCTTCAAAGTGGCGAAGCTTCAGAAGAAGGCAAA
                      ____________________________________________________________
consensus GCAACACCTTATACAATCTTTCACCTTCTTCAAAGTGGCGAAGCTTCAGAAGAAGGCAAA
 
. : . : . : . : . : . :
JMFS107G02+ CCTCTTGTTCCTTATATCCTAGTTTATCAACAATTTTATATTCTTTCTTGCGTAATTCTT
                      ____________________________________________________________
consensus CCTCTTGTTCCTTATATCCTAGTTTATCAACAATTTTATATTCTTTCTTGCGTAATTCTT
 
. : . : . : . : . : . :
JMFS107G02+ CAAGAGCCCTCTCAAGAGATCCACATTCCTCTAACAAAGAGATCTTATATAAAAGCATTT
                      ____________________________________________________________
consensus CAAGAGCCCTCTCAAGAGATCCACATTCCTCTAACAAAGAGATCTTATATAAAAGCATTT
 
. : . : . : . : . : . :
JMFS107G02+ CCCCATGCTCACAACGTTCATTTTCTGGAGGGTAATCATCCTCTAGAGTCCCTTCATATG
JMSF050A07+ CTAGAGTCCCTTCATATG
                      ____________________________________________________________
consensus CCCCATGCTCACAACGTTCATTTTCTGGAGGGTAATCATCCTCTAGAGTCCCTTCATATG
 
. : . : . : . : . : . :
JMFS107G02+ CCTCAAGGATATCAACAGCTTTTGATCCATTTGAGTTCAAATGATGAGCAACAGCAAAGC
JMSF050A07+ CCTCAAGGATATCAACAGCTTTTGATCCATTTGAGTTCAAATGATGAGCAACAGCAAAGC
JMFS043F07+ AAGGATATCAACAGCTTNTGATCCATTTGAGTTCAAATGATGAGCAACAGCANAGC
JMFS126A02+ TGATGAGCAACAGCAAAGC
JMFS118C02+ AAGGATATCAACAGCTTNTGATCCATNTGAGTTCAAATGATGAGCAACAGCAAAGC
JMFS008G05+ GATATCAACAGCTTNTGATCCATTTGAGTTCAAATGATGAGCAACAGCANAGC
JMSF020M12+ TGAGTTCAAATGATGAGCAACAGCAAAGC
                      ____________________________________________________________
consensus CCTCAAGGATATCAACAGCTTTTGATCCATTTGAGTTCAAATGATGAGCAACAGCAAAGC
 
. : . : . : . : . : . :
JMFS107G02+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMSF050A07+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMFS043F07+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMFS126A02+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMFS118C02+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMFS008G05+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
JMSF020M12+ CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
                      ____________________________________________________________
consensus CAATCCAATTCATACGGTGATTTGGCTTCAATGTCAGCAGTTGTAGTCTTGTTTCCACAA
 
. : . : . : . : . : . :
JMFS107G02+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMSF050A07+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMFS043F07+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMFS126A02+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMFS118C02+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMFS008G05+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
JMSF020M12+ AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
                      ____________________________________________________________
consensus AGCCTATCAAGTCACGCATTTGTGCCTGTAAAAGAGATAAGTCACGCAATATCTCTATGT
 
. : . : . : . : . : . :
JMFS107G02+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMSF050A07+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMFS043F07+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMFS126A02+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMFS118C02+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMFS008G05+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
JMSF020M12+ TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
                      ____________________________________________________________
consensus TGTCAGGATCAATTCTAAGTGCATTTCTATAGCACTTTATAGCTTCCCTGTATTCTCTAT
 
. : . : . : . : . : . :
JMFS107G02+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMSF050A07+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMFS043F07+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMFS126A02+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMFS118C02+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMFS008G05+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
JMSF020M12+ CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
                      ____________________________________________________________
consensus CTGACCTGTATAGGAGACCATAAACATGCCAGCAAACATGGCTCTTAAGGTCATTCTTCA
 
. : . : . : . : . : . :
JMFS107G02+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGAC
JMSF050A07+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
JMFS043F07+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
JMFS126A02+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
JMFS118C02+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
JMFS008G05+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
JMSF020M12+ ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
                      ____________________________________________________________
consensus ATCCAAGCCGAACAAGATCATATGCTTCTGACTTGCGACCCATACAATTTAATGTCAATC
 
. : . : . : . : . : . :
JMSF050A07+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
JMFS043F07+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
JMFS126A02+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
JMFS118C02+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
JMFS008G05+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
JMSF020M12+ CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
                      ____________________________________________________________
consensus CTTTCATTGCCAAAGTTTCTCCATGATCAGGAAATTTCTTAAGTATAGCTTCAGCAGCTT
 
. : . : . : . : . : . :
JMSF050A07+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
JMFS043F07+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
JMFS126A02+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
JMFS118C02+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
JMFS008G05+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
JMSF020M12+ TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
                      ____________________________________________________________
consensus TTAACCCTTTCTTATATTGTTTTGTCTCATATGATTTAACGATGACTTTGAAGAGGTTGG
 
. : . : . : . : . : . :
JMSF050A07+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
JMFS043F07+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
JMFS126A02+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
JMFS118C02+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
JMFS008G05+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
JMSF020M12+ CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
                      ____________________________________________________________
consensus CCTCCTTAGGAGGAAGCGAAGCGCCCATTGTTGCAGAGCAGGGAGTGGTGGAGGAGAAAG
 
. : . : . : . : . : . :
JMSF050A07+ GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
JMFS043F07+ GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
JMFS126A02+ GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGG
JMFS118C02+ GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
JMFS008G05+ GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
JMSF020M12+ GGAAGTATAAGAGATTAGAAGAGTAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
                      ____________________________________________________________
consensus GGAAGTATAAGAGATTAGAAGAGCAGGGAGGGGTTGGGAGGGCTTTAATGGGCTGCGAGA
 
. : . : . : . : . : . :
JMSF050A07+ GCCGAGAGAGCAGAAAGACAGC
JMFS043F07+ GCCGAGAGAGCAGAAAGACAGCGAG
JMFS118C02+ GCCGAGAGAGCAGAAAGACAGCGAG
JMFS008G05+ GCCGAGAGAGCAGAAAGACAGCGAGAGGAGAGGAAGTGAGGTGTTTGGC
JMSF020M12+ GCCGAGAGAGCAGAAAGACAGCGAGAGGAGAGGAAGTGAGGTGTTTGGCGTTAATCTGCC
                      ____________________________________________________________
consensus GCCGAGAGAGCAGAAAGACAGCGAGAGGAGAGGAAGTGAGGTGTTTGGCGTTAATCTGCC