Contig 011984:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019J03Sequence226011984 (3)658022523gb|AAF24821.1|AC007592_142e-06F12K11.18 [Arabidopsis thaliana]
JMSF037C15Sequence647011984 (3)ref|XP_009611943.1|1e-10PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 isoform X1714014044 (2)ref|XP_007048761.1|3e-44Nucleotide/sugar transporter family protein isoform 1 [Theobroma cacao] gb|EOX9
JMSF038C15Sequence566011984 (3)ref|XP_009611943.1|9e-11PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 isoform X1116014044 (2)emb|CBI22039.3|4e-07unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF037C15+              GTCTTGCAGACACATCACCAAAGTCAACACCACGTGTCATTCTTTCCCAAAATGTAC
                      ____________________________________________________________
consensus                GTCTTGCAGACACATCACCAAAGTCAACACCACGTGTCATTCTTTCCCAAAATGTAC
 
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JMSF038C15+                                   CTAAAGATCCATTTCCTATCTCACTTTCACTATGAT
JMSF037C15+           CTCTTACCTGGTGTCTCTCTGCCTCTAAAGATCCATTTCCTATCTCACTTTCACTATGAT
                      ____________________________________________________________
consensus             CTCTTACCTGGTGTCTCTCTGCCTCTAAAGATCCATTTCCTATCTCACTTTCACTATGAT
 
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JMSF038C15+           GAAGGTGAGGCAATTCAAAATCNGAATCCTCAGCACCACTATTCACATCCCCCAGTTGAG
JMSF037C15+           GAAGGTGAGGCAATTCAAAATCCGAATCCTCAGCACCACTATTCACATCCCCCAGTTGAG
                      ____________________________________________________________
consensus             GAAGGTGAGGCAATTCAAAATCCGAATCCTCAGCACCACTATTCACATCCCCCAGTTGAG
 
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JMSF038C15+           GTGAATGGAACGCTCCATTCTCATCGAACCAGCCGGAGAAGGAAGGATCCCTACGGAAAA
JMSF037C15+           GTGAATGGAACGCTCCATTCTCATCGAACCAGCCGGAGAAGGAAGGATCCCTACGGAAAA
                      ____________________________________________________________
consensus             GTGAATGGAACGCTCCATTCTCATCGAACCAGCCGGAGAAGGAAGGATCCCTACGGAAAA
 
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JMSF038C15+           CCGACACGGGATGCTCACTAAAGCTGCCCTCACTCTGACCAACCTCAAGCTTCTGTAAAG
JMSF037C15+           CCGACACGGGATGCTCACTAAAGCTGCCCTCACTCTGACCAACCTCAAGCTTCTGTAAAG
                      ____________________________________________________________
consensus             CCGACACGGGATGCTCACTAAAGCTGCCCTCACTCTGACCAACCTCAAGCTTCTGTAAAG
 
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JMSF038C15+           GAAGCTCACTTTCTACCATCTCAGAGCCATATATCCATCGGCTCGATCAACATTCCCAGT
JMSF037C15+           GAAGCTCACTTTCTACCATCTCAGAGCCATATATCCATCGGCTCGATCAACATTCCCAGT
                      ____________________________________________________________
consensus             GAAGCTCACTTTCTACCATCTCAGAGCCATATATCCATCGGCTCGATCAACATTCCCAGT
 
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JMSF038C15+           CCCCAATCAACCCCTCGCAGCTCGAATCTCACTGAAATAAAACCCCACGAGCAGCCCTAA
JMSF037C15+           CCCCAATCAACCCCTCGCAGCTCGAATCTCACTGAAATAAAACCCCACGAGCAGCCCTAA
                      ____________________________________________________________
consensus             CCCCAATCAACCCCTCGCAGCTCGAATCTCACTGAAATAAAACCCCACGAGCAGCCCTAA
 
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JMSF038C15+           ATAGTAATCCAAACTATCCGGGATCTGGCAACTCAGAAATTCCTCACCTCTCCACCAGAG
JMSF037C15+           ATAGTAATCCAAACTATCCGGGATCTGGCAACTCAGAAATTCCTCACCTCTCCACCAGAG
                      ____________________________________________________________
consensus             ATAGTAATCCAAACTATCCGGGATCTGGCAACTCAGAAATTCCTCACCTCTCCACCAGAG
 
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JMSF038C15+           TCTGGGTGGAGCCAAAGAGCTGAAGAAGAAGATGAAGGAATTATATGACAGATTCGAGGG
JMSF037C15+           TCTGGGTGGAGCCAAAGAGCTGAAGAAGAAGATGAAGGAATTATATGACAGATTCGAGGG
JMSF019J03+                         AAGAGCTGAAGAAGAAGATGAAGGAATTATATGACAGATTCGAGGG
                      ____________________________________________________________
consensus             TCTGGGTGGAGCCAAAGAGCTGAAGAAGAAGATGAAGGAATTATATGACAGATTCGAGGG
 
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JMSF038C15+           TTTTTTCCTGGTGGGAGATCAGGTTTGGGAATTCAGATCTGTTATGGGGAAGAATACGGA
JMSF037C15+           TTTTTTCCTGGTGGGAGATCAGGTTTGGGAATTCAGATCTGTTATGGGGAAGAATACGGA
JMSF019J03+           TTTTTTCCTGGTGGGAGATCAGGTTTGGGAATTCAGATCTGTTATGGGGAAGAATACGGA
                      ____________________________________________________________
consensus             TTTTTTCCTGGTGGGAGATCAGGTTTGGGAATTCAGATCTGTTATGGGGAAGAATACGGA
 
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JMSF038C15+           GGGAAGGAATTGGTTTGACGTCGGGGGTGAAGTCGCTGTCTTCTGTTAC           
JMSF037C15+           GGGAAGGAATTGGTTTGACGTCGGGGGTGAAGTCGCTGTCTTCTGTTAC           
JMSF019J03+           GGGAAGGAATTGGTTTGACGTCGGGGGTGAAGTCGCTGTCTTCTGTTACGAGTTCGGAAG
                      ____________________________________________________________
consensus             GGGAAGGAATTGGTTTGACGTCGGGGGTGAAGTCGCTGTCTTCTGTTACGAGTTCGGAAG
 
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JMSF019J03+           CCGGAAGCTTTCCGAGCTAAAGTATTTGTTGACTTGTCTAATGTTTTTGATTAAATTCTC
                      ____________________________________________________________
consensus             CCGGAAGCTTTCCGAGCTAAAGTATTTGTTGACTTGTCTAATGTTTTTGATTAAATTCTC