Contig 011968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016F12Sequence499011968 (2)733005731 (5)ref|XP_009794649.1|1e-117PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like, partial [Nicotiana sy
JMSF031G20Sequence654011968 (2)ref|XP_007018342.1|1e-58Glutamyl-tRNA reductase family protein [Theobroma cacao] gb|EOY15567.1| Glutamyl674005731 (5)ref|XP_009794649.1|1e-107PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like, partial [Nicotiana sy

Alignment

This contig is upended


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JMSF031G20+                                       ACTCGGGACTCCACTTTTCTTTGACATCCATT
                      ____________________________________________________________
consensus                                         ACTCGGGACTCCACTTTTCTTTGACATCCATT
 
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JMSF031G20+           CAGTCACTTCTTTAACGCCCCGATGCTGAGAAAGAGCTACAACATATATCTCCATCCTGT
                      ____________________________________________________________
consensus             CAGTCACTTCTTTAACGCCCCGATGCTGAGAAAGAGCTACAACATATATCTCCATCCTGT
 
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JMSF031G20+           TACACGTACTAAGAACAGCAGCTTCTTCGATATGATTCAAATTGCAGAGCTCCTCAATGG
                      ____________________________________________________________
consensus             TACACGTACTAAGAACAGCAGCTTCTTCGATATGATTCAAATTGCAGAGCTCCTCAATGG
 
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JMSF031G20+           CTCTACCCCACTCGGCTTCAGGAATAGCTAGTTTTTCTCGCATTTCAACTGGCGCAGTGT
                      ____________________________________________________________
consensus             CTCTACCCCACTCGGCTTCAGGAATAGCTAGTTTTTCTCGCATTTCAACTGGCGCAGTGT
 
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JMSF031G20+           GGATACTGAGCCCAATAACAACAATACTGCTCCTTTCTTTTGTATATCTGTCACCGGCGG
JMSF016F12+                                                    GTATATCTGTCACCGGCGG
                      ____________________________________________________________
consensus             GGATACTGAGCCCAATAACAACAATACTGCTCCTTTCTTTTGTATATCTGTCACCGGCGG
 
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JMSF031G20+           AGGTCTTGAGCTGCTCGAGGGCCGAAAGGCTGGAATCCGACGCCGCATTGGCGGCGGCGG
JMSF016F12+           AGGTCTTGAGCTGCTCGAGGGCCGAAAGGCTGGAATCCGACGCCGCATTGGCGGCGGCGG
                      ____________________________________________________________
consensus             AGGTCTTGAGCTGCTCGAGGGCCGAAAGGCTGGAATCCGACGCCGCATTGGCGGCGGCGG
 
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JMSF031G20+           CTGCAGCATTCTGAGGCTGAACCGAGACCTCGCACCTGATGGAAGAACTGAACGAACCCC
JMSF016F12+           CTGCAGCATTCTGAGGCTGAACCGAGACCTCGCACCTGATGGAAGAACTGAACGAACCCC
                      ____________________________________________________________
consensus             CTGCAGCATTCTGAGGCTGAACCGAGACCTCGCACCTGATGGAAGAACTGAACGAACCCC
 
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JMSF031G20+           TCTGGACCAAGCCGCGTGGTCTAGCTCGAGCCGACGCCTTGCAGAGCACCCCAAACGACG
JMSF016F12+           TCTGGACCAAGCCGCGTGGTCTAGCTCGAGCCGACGCCTTGCAGAGCACCCCAAACGACG
                      ____________________________________________________________
consensus             TCTGGACCAAGCCGCGTGGTCTAGCTCGAGCCGACGCCTTGCAGAGCACCCCAAACGACG
 
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JMSF031G20+           CCGGAGAAGCCGCCGGATTCGAAGCGGCGGCGGCGGCGTTGCTGACCAGCAAAGACTCGA
JMSF016F12+           CCGGAGAAGCCGCCGGATTCGAAGCGGCGGCGGCGGCGTTGCTGACCAGCAAAGACTCGA
                      ____________________________________________________________
consensus             CCGGAGAAGCCGCCGGATTCGAAGCGGCGGCGGCGGCGTTGCTGACCAGCAAAGACTCGA
 
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JMSF031G20+           GTTTGGCCCCTGAAAATGCGCCGGAGACCGCCATTCCCCGCGGCAAGAATTCAGCGCTTC
JMSF016F12+           GTTTGGCCCCTGAAAATGCGCCGGAGACCGCCATTCCCCGCGGCAAGAATTCAGCGCTTC
                      ____________________________________________________________
consensus             GTTTGGCCCCTGAAAATGCGCCGGAGACCGCCATTCCCCGCGGCAAGAATTCAGCGCTTC
 
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JMSF031G20+           CACCACAAGCCTTACCCCCTTGGATCGGAGAAAAGTGGGGCGTCGGAGAGGCGTGTGGCG
JMSF016F12+           CACCACAAGCCTTACCCCCTTGGATCGGAGAAAAGTGGGGCGTCGGAGAGGCGTGTGGCG
                      ____________________________________________________________
consensus             CACCACAAGCCTTACCCCCTTGGATCGGAGAAAAGTGGGGCGTCGGAGAGGCGTGTGGCG
 
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JMSF031G20+           GTTGGACGGAGGGGTTGTG                                         
JMSF016F12+           GTTGGACGGAGGGGTTGTGACGTTGAGGAAATGATTGGTCGGAGGGGAAATGCGTGGGCG
                      ____________________________________________________________
consensus             GTTGGACGGAGGGGTTGTGACGTTGAGGAAATGATTGGTCGGAGGGGAAATGCGTGGGCG
 
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JMSF016F12+           AGTATTGACCAGTGCTGAGTCAGCGAGTTGGAGATTTCTTTCAATTCTGATTGGCGAATC
                      ____________________________________________________________
consensus             AGTATTGACCAGTGCTGAGTCAGCGAGTTGGAGATTTCTTTCAATTCTGATTGGCGAATC