Contig 011964:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015M20-                                                         ATTGCCTGGAATT
                      ____________________________________________________________
consensus                                                            ATTGCCTGGAATT
 
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rJMSF015M20-          GAAAGACACTTAGCCTACCACTAGAAGAACCTCAAAAACAACATATATGCTTACACATCA
                      ____________________________________________________________
consensus             GAAAGACACTTAGCCTACCACTAGAAGAACCTCAAAAACAACATATATGCTTACACATCA
 
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rJMSF015M20-          ATGAGTGTGTCTGCTGCTGATTTTTCAAGCTCAAGTATAGCATCAAATCCAAAGGCATTC
                      ____________________________________________________________
consensus             ATGAGTGTGTCTGCTGCTGATTTTTCAAGCTCAAGTATAGCATCAAATCCAAAGGCATTC
 
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rJMSF015M20-          CCGGGTGCAAATGATGATTTGAGTTCTTTGGCAGTCTGAGTGGTGGTAACCTTGTTTTCC
                      ____________________________________________________________
consensus             CCGGGTGCAAATGATGATTTGAGTTCTTTGGCAGTCTGAGTGGTGGTAACCTTGTTTTCC
 
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rJMSF015M20-          TTTACAACGAGCTTTTCCTCCGTCACATAATTGCCCACGGTTGAGGTAATTATTTCCTGG
                      ____________________________________________________________
consensus             TTTACAACGAGCTTTTCCTCCGTCACATAATTGCCCACGGTTGAGGTAATTATTTCCTGG
 
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rJMSF015M20-          ATTACAAAATTGGTGACTCGGTCTTCGCCTAGCATCTGTAGTAAGAACTCCTTCGGAATC
                      ____________________________________________________________
consensus             ATTACAAAATTGGTGACTCGGTCTTCGCCTAGCATCTGTAGTAAGAACTCCTTCGGAATC
 
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rJMSF015M20-          TTCATTTTCCCTCCTTTTTGCTTGCGAAAACCAGGAATTGGTGGTGCTTCACGACCCAAC
JMSF015M20+                      TCCTTTTTGCTTGCGAAAACCAGGAATTGGTGGTGCTTCACGACCCAAC
                      ____________________________________________________________
consensus             TTCATTTTCCCTCCTTTTTGCTTGCGAAAACCAGGAATTGGTGGTGCTTCACGACCCAAC
 
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rJMSF015M20-          CTTATCAAAATCTTATCAAAAATTATTTGTGTGTCTTTTCCTGTCAAATCAACTCTGACT
JMSF015M20+           CTTATCAAAATCTTATCAAAAATTATTTGTGTGTCTTTTCCTGTCAAATCAACTCTGACT
                      ____________________________________________________________
consensus             CTTATCAAAATCTTATCAAAAATTATTTGTGTGTCTTTTCCTGTCAAATCAACTCTGACT
 
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rJMSF015M20-          TGTATTGTTTTATCATCTTGAGACACAAGAGTAACCTCAGAATCTTTAACAGTTATGGAA
JMSF015M20+           TGTATTGTTTTATCATCTTGAGACACAAGAGTAACCTCAGAATCTTTAACAGTTATGGAA
                      ____________________________________________________________
consensus             TGTATTGTTTTATCATCTTGAGACACAAGAGTAACCTCAGAATCTTTAACAGTTATGGAA
 
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rJMSF015M20-          GCGTCATCTGATAGGGATGTTTGAAAACCTGAACCAAGGGCACATGTGGGCCTGACCAAA
JMSF015M20+           GCGTCATCTGATAGGGATGTTTGAAAACCTGAACCAAGGGCACATGTGGGCCTGACCAAA
                      ____________________________________________________________
consensus             GCGTCATCTGATAGGGATGTTTGAAAACCTGAACCAAGGGCACATGTGGGCCTGACCAAA
 
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rJMSF015M20-          TATCTACTGGAGGGGCTCTTGCATACAAATTTAATTCCAACAGGATACTTCCCATTTAGT
JMSF015M20+           TATCTACTGGAGGGGCTCTTGCATACAAATTTAATTCCAACAGGATACTTCCCATTTAGT
                      ____________________________________________________________
consensus             TATCTACTGGAGGGGCTCTTGCATACAAATTTAATTCCAACAGGATACTTCCCATTTAGT
 
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rJMSF015M20-          GCAACACAGCTAGATAGGGAATATTTCGGAAAATTTGTAATGCAAAAACCCCGCAAAACT
JMSF015M20+           GCAACACAGCTAGATAGGGAATATTTCGGAAAATTTGTAATGCAAAAACCCCGCAAAACT
                      ____________________________________________________________
consensus             GCAACACAGCTAGATAGGGAATATTTCGGAAAATTTGTAATGCAAAAACCCCGCAAAACT
 
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rJMSF015M20-          CTGAATTGCTGGCGCGATACTGACGTCACGGCCAAGGTCGTCGTCGTCATCGTCGCCATT
JMSF015M20+           CTGAATTGCTGGCGCGATACTGACGTCACGGCCAAGGTCGTCGTCGTCATCGTCGCCATT
                      ____________________________________________________________
consensus             CTGAATTGCTGGCGCGATACTGACGTCACGGCCAAGGTCGTCGTCGTCATCGTCGCCATT
 
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rJMSF015M20-          GAAGATATGCTTCTTTCCCGACCAAAG                                 
JMSF015M20+           GAAGATATGCTTCTTTCCCGACCAAAGAGACGGCAGCAGGCCAGAAGAGCAGATCCACTC
                      ____________________________________________________________
consensus             GAAGATATGCTTCTTTCCCGACCAAAGAGACGGCAGCAGGCCAGAAGAGCAGATCCACTC