Contig 011958:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS052G03+                                                               AGGGAGTC
                      ____________________________________________________________
consensus                                                                 AGGGAGTC
 
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JMFS052G03+           CTGGAGATCCCTTATCCTTTGAAAAACTTGATCCATCAGTTTTTCTCAAAAAAAAGTTAG
                      ____________________________________________________________
consensus             CTGGAGATCCCTTATCCTTTGAAAAACTTGATCCATCAGTTTTTCTCAAAAAAAAGTTAG
 
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JMFS052G03+           CCCTTCTTGCATCAGTTGAATTTCTCGTTGCTCCAGGATTAGGATCACCATCCTCTGGAT
                      ____________________________________________________________
consensus             CCCTTCTTGCATCAGTTGAATTTCTCGTTGCTCCAGGATTAGGATCACCATCCTCTGGAT
 
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JMFS052G03+           CACGTGGGTGAAATGCGGAAAAATCTTGCAGGGAAATGGAAGAGGAGAGTCGTAATGCAT
                      ____________________________________________________________
consensus             CACGTGGGTGAAATGCGGAAAAATCTTGCAGGGAAATGGAAGAGGAGAGTCGTAATGCAT
 
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JMFS052G03+           TCTTCTGACTTATGCTAGGAATCTTATATCCATGGAGTGAACCTGACAATGGTGGCAAAG
JMSF045N20+                       TGCTAGGAATCTTATATCCATGGAGTGAACCTGACAATGGTGGCAAAG
                      ____________________________________________________________
consensus             TCTTCTGACTTATGCTAGGAATCTTATATCCATGGAGTGAACCTGACAATGGTGGCAAAG
 
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JMFS052G03+           CTGATGATACAAAAGGACCATTATTGGTCTTTGAAGTTGAGAAACGAGCTTCTGCAGCAG
JMSF045N20+           CTGATGATACAAAAGGACCATTATTGGTCTTTGAAGTTGAGAAACGAGCTTNTGCAGCAG
                      ____________________________________________________________
consensus             CTGATGATACAAAAGGACCATTATTGGTCTTTGAAGTTGAGAAACGAGCTTCTGCAGCAG
 
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JMFS052G03+           CAAGAAATTCGGCAATGCTGCTGAGCACCATTTTTGCAGACTACTTACTAGTTATAGGCA
JMSF045N20+           CAAGAAATTCGGCAATGCTGCTGAGCACCATTTTTGCAGA-AACTTACTAGTTATAGGCA
                      ____________________________________________________________
consensus             CAAGAAATTCGGCAATGCTGCTGAGCACCATTTTTGCAGACTACTTACTAGTTATAGGCA
 
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JMFS052G03+           AAAATGTGCTTCAACATCATTTTCTTGTCCATCTTCATGTTGTATGTGAAAAGGNTCANT
JMSF045N20+           AAAATGTGCTTCAACATCATTTTCTTGTCCATCTTCATGTTGTATGTGAAAA-GCTCATT
                      ____________________________________________________________
consensus             AAAATGTGCTTCAACATCATTTTCTTGTCCATCTTCATGTTGTATGTGAAAAGGCTCATT
 
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JMFS052G03+           GCAACACAACANTCAGAGGTCATCAAAACAAAATCAATCAGAGATGACCCAAAAAGGACG
JMSF045N20+           GCAACACAACACTCAGAGCTCATCAAAACAAANTCAATCAGAGATGACCCAAAAAGGACG
JMSF007P16+                       TCAGAGCTCATCAAAACAAAATCANTCAGAGATGACCCAAAAAGGACG
JMSF014C23+                       TCAGAGCTCATCAAAACAAAATCANTCAGAGATGACCCAAAAAGGACG
                      ____________________________________________________________
consensus             GCAACACAACACTCAGAGCTCATCAAAACAAAATCAATCAGAGATGACCCAAAAAGGACG
 
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JMFS052G03+           TCAGATCTCA                                                  
JMSF045N20+           TCAGATCTCAGAAGTCGCCGGCGGTAAGGACGGAGGAAGAGTTGTTNGGCGCCGCGAGAT
JMSF007P16+           TCAGATCTCAGAAGTCGCCGGCGGTAAGGACGGAGGAAGAGTTGTTTGGCGCCGCGAGAT
JMSF014C23+           TCAGATCTCAGAAGTCGCCGGCGGTAAGGACGGAGGAAGAGTTGTTTGGCGCCGCGAGAT
                      ____________________________________________________________
consensus             TCAGATCTCAGAAGTCGCCGGCGGTAAGGACGGAGGAAGAGTTGTTTGGCGCCGCGAGAT
 
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JMSF045N20+           CGTCGGGAAGAATTCCGGGACGGCGAAGATCCAAAAAAGAGGACTGAATTTAAACGGAAA
JMSF007P16+           CGTCGGGAAGAATTCCGGGACGGCGAAGATCCAAAAAAGAGGACTGAATTTTAACGGAAA
JMSF014C23+           CGTCGGGAAGAATTCCGGGACGGCGAAGATCCAAAAAAGAGGACTGAATTTTAACGGAAA
                      ____________________________________________________________
consensus             CGTCGGGAAGAATTCCGGGACGGCGAAGATCCAAAAAAGAGGACTGAATTTTAACGGAAA
 
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JMSF045N20+           TGAACAGTACCGAACTCGCTCGCCGTGTTGAACGACTCCAT                   
JMSF007P16+           TGAACAGTACCGAACTCGCTCGCCGTGTTGAACGACTCCAT                   
JMSF014C23+           TGAACAGTACCGAACTCGCTCGCCGTGTTGAACGACTCCATCACCATCGTCATTTCCCCC
                      ____________________________________________________________
consensus             TGAACAGTACCGAACTCGCTCGCCGTGTTGAACGACTCCATCACCATCGTCATTTCCCCC