clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS018H04 | Sequence | 617 | 011957 (5) | ref|XP_006338039.1| | 2e-96 | PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero | |||||
JMFS064G06 | Sequence | 622 | 011957 (5) | ref|XP_009775031.1| | 6e-74 | PREDICTED: BEACH domain-containing protein lvsC isoform X3 [Nicotiana sylvestri | |||||
JMFS136F09 | Sequence | 612 | 011957 (5) | ref|XP_006338039.1| | 1e-83 | PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero | |||||
JMFS153F08 | Sequence | 625 | 011957 (5) | ref|XP_006338039.1| | 5e-106 | PREDICTED: BEACH domain-containing protein lvsC-like isoform X2 [Solanum tubero | |||||
JMSF014C01 | Sequence | 377 | 011957 (5) | ref|XP_009613073.1| | 1e-69 | PREDICTED: BEACH domain-containing protein lvsC isoform X1 [Nicotiana tomentosi | 777 | 014988 | ref|XP_009613074.1| | 3e-83 | PREDICTED: BEACH domain-containing protein lvsC isoform X2 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMFS064G06+ GACA
____________________________________________________________
consensus GACA
. : . : . : . : . : . :
JMFS064G06+ GCCTTTACCTTAGAGATGATCCATCTTCTATGGCGCTTGATATTGTTGGGATTCTTNTGA
____________________________________________________________
consensus GCCTTTACCTTAGAGATGATCCATCTTCTATGGCGCTTGATATTGTTGGGATTCTTNTGA
. : . : . : . : . : . :
JMFS064G06+ GCATTCCCACATAATGCACTTATGCTATCAATAGCTCTTCCTCTTTCAGAATCCAGATCA
____________________________________________________________
consensus GCATTCCCACATAATGCACTTATGCTATCAATAGCTCTTCCTCTTTCAGAATCCAGATCA
. : . : . : . : . : . :
JMFS064G06+ AGACTGATGGCCCATTTAAAAATATTCTGCTTCTGGCTTCCACCTACCTGATCAGGCTTG
____________________________________________________________
consensus AGACTGATGGCCCATTTAAAAATATTCTGCTTCTGGCTTCCACCTACCTGATCAGGCTTG
. : . : . : . : . : . :
JMFS064G06+ CTCAGATCAAACATACCTGAAGAGTCAAAGTTTTTGAAGACAGATGATCCTCCAGTGCCT
____________________________________________________________
consensus CTCAGATCAAACATACCTGAAGAGTCAAAGTTTTTGAAGACAGATGATCCTCCAGTGCCT
. : . : . : . : . : . :
JMFS064G06+ TCCACTAAAAATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
JMFS136F09+ ATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
____________________________________________________________
consensus TCCACTAAAAATTCACCAGAGAAATGCAAGAACTTCTTCATGACAGCCAGATGCCCAGCT
. : . : . : . : . : . :
JMFS064G06+ AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
JMFS136F09+ AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
____________________________________________________________
consensus AACTTTCTCTTTGGTGTAACCAGAACACAGCGGACTGACAAGAGAACCTCACTATTTTCA
. : . : . : . : . : . :
JMFS064G06+ GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
JMFS136F09+ GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
____________________________________________________________
consensus GTTTCAGCTGATGAAGAGGAGCAATCTTTTCTGTCCTGAGCAATGTCTGTTTGATCACCA
. : . : . : . : . : . :
JMFS064G06+ ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
JMFS136F09+ ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
____________________________________________________________
consensus ATGTCTTTGACGACATCTGAGAACCGTTTATCAGTTGGGTCATCAGAAACAGGACCACTA
. : . : . : . : . : . :
JMFS064G06+ GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
JMFS136F09+ GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
JMFS018H04+ TCCCT
____________________________________________________________
consensus GATTCAGCATCACTTTCACTTAATTCTGAAGAACTCTCATCTGTAATCTTCCTAATCCCT
. : . : . : . : . : . :
JMFS064G06+ TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
JMFS136F09+ TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
JMFS018H04+ TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
____________________________________________________________
consensus TTCAGCAAAATCCGTTTCATTTGCTCTGGAATATTGGCCCCAAATCCAGATTTTCCATCA
. : . : . : . : . : . :
JMFS064G06+ TTGGCAAGAGAAAGGGCG
JMFS136F09+ TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
JMFS018H04+ TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
____________________________________________________________
consensus TTGGCAAGAGAAAGGGCGTCAGTAGGAGCAATAGTAGAGAGAGGAAGACATAGCTTTTCA
. : . : . : . : . : . :
JMFS136F09+ TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
JMFS018H04+ TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
JMFS153F08+ TCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
____________________________________________________________
consensus TCAAAATGATAATTCCGTCTCAACTTTTGCCGGCGACGCCATGCATCTTCTATCTTATCA
. : . : . : . : . : . :
JMFS136F09+ AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
JMFS018H04+ AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
JMFS153F08+ AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
____________________________________________________________
consensus AGTTTCCAGTGTGTTATAATATTATTTGGAAAAGGATTAGCAGACCATGGACCCCTCTCA
. : . : . : . : . : . :
JMFS136F09+ TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
JMFS018H04+ TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
JMFS153F08+ TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
____________________________________________________________
consensus TCAATTAGAGAGCGGAAAGTATGAATCCATTTTCCAGCAACTACTTGCTGCTCCTCATCT
. : . : . : . : . : . :
JMFS136F09+ TTAGATAATTGGAAAGAATCCC
JMFS018H04+ TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
JMFS153F08+ TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
____________________________________________________________
consensus TTAGATAATTGGAAAGAATCCCTTCTCTTGTTGTCTGAGGCAAGAACAGCAATTAAACTG
. : . : . : . : . : . :
JMFS018H04+ CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
JMFS153F08+ CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
____________________________________________________________
consensus CTCTGGATTTCATCTTTGATTGTTTTCTTTTGATTAGAATCAACAACCATACTTTCATCG
. : . : . : . : . : . :
JMFS018H04+ AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
JMFS153F08+ AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
____________________________________________________________
consensus AGCCTAAGATGAAGCTCTTGTAACTGTCTAGTCCTATCTGCCCCCAAGCTCTTTATATAT
. : . : . : . : . : . :
JMFS018H04+ TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
JMFS153F08+ TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
____________________________________________________________
consensus TTTACTTCATCAGAAAACGCAGAAAGTACTCGATCCTTTTGGATCAGGTTATGAATGGAG
. : . : . : . : . : . :
JMFS018H04+ CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
JMFS153F08+ CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
JMSF014C01+ TGCCAACAATACTTGTA
____________________________________________________________
consensus CTTCCTTCTTTTGGATTGCTGCTTGAATCAGCTGAATCCTCTCTGCCAACAATACTTGTA
. : . : . : . : . : . :
JMFS018H04+ GCTAACATTGAC
JMFS153F08+ GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
JMSF014C01+ GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
____________________________________________________________
consensus GCTAACATTGACTTTCCCCAACTTACTGTTTCACGGATTAAATGAGCAATAACATGAAAC
. : . : . : . : . : . :
JMFS153F08+ CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
JMSF014C01+ CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
____________________________________________________________
consensus CTAGCACCATCATCCAGCACCCCATAATGTGATCTAACAGCAAGCAAGGCCCATATGAAG
. : . : . : . : . : . :
JMFS153F08+ AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAG
JMSF014C01+ AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAGGCAGGGTAGAAGGGGG
____________________________________________________________
consensus AGTTGCAACCGGCTCTTGCTTTGCTCATCATCAGCAGTGAGAAGGCAGGGTAGAAGGGGG
. : . : . : . : . : . :
JMSF014C01+ ATGACCTGTTGAACACATCGAGATGCTCTTTCAAGGGATGATTTACAAAGATAGAGGATC
____________________________________________________________
consensus ATGACCTGTTGAACACATCGAGATGCTCTTTCAAGGGATGATTTACAAAGATAGAGGATC
. : . : . : . : . : . :
JMSF014C01+ ATCAGTCGAAAAACAATTTTAGGACATTTCTCCCCTCTTAGAAGCATAGCTTTGTCAACA
____________________________________________________________
consensus ATCAGTCGAAAAACAATTTTAGGACATTTCTCCCCTCTTAGAAGCATAGCTTTGTCAACA
. : . : . : . : . : . :
JMSF014C01+ GGTTTATTTGGTTTTCCAGCCAAAGCATTGCCAATTCCACCAGATACAACAACAGCAGCC
____________________________________________________________
consensus GGTTTATTTGGTTTTCCAGCCAAAGCATTGCCAATTCCACCAGATACAACAACAGCAGCC